Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G055090.1 | Barley | cytosol | 11.76 | 4.65 |
| HORVU6Hr1G039050.1 | Barley | mitochondrion | 7.35 | 3.97 |
| Solyc10g047460.1.1 | Tomato | cytosol | 2.94 | 3.28 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus | 10.29 | 2.46 |
| Solyc08g022160.1.1 | Tomato | cytosol | 1.47 | 1.37 |
| Solyc07g032420.1.1 | Tomato | cytosol | 1.47 | 0.54 |
| Solyc01g011410.1.1 | Tomato | nucleus | 0.0 | 0.0 |
| Solyc01g017740.1.1 | Tomato | nucleus | 0.0 | 0.0 |
| Solyc01g065770.1.1 | Tomato | mitochondrion | 0.0 | 0.0 |
| Solyc02g011810.1.1 | Tomato | cytosol | 0.0 | 0.0 |
| Solyc07g042310.1.1 | Tomato | cytosol, mitochondrion, nucleus | 0.0 | 0.0 |
| Solyc08g022170.1.1 | Tomato | plastid | 0.0 | 0.0 |
| Solyc09g009360.1.1 | Tomato | cytosol, endoplasmic reticulum, nucleus, plastid | 0.0 | 0.0 |
| Solyc10g047470.1.1 | Tomato | mitochondrion | 0.0 | 0.0 |
| Solyc10g052800.1.1 | Tomato | cytosol | 0.0 | 0.0 |
| VIT_00s0246g00080.t01 | Wine grape | cytosol, mitochondrion, nucleus | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.645.20 | MapMan:35.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016651 | GO:GO:0048038 | GO:GO:0051287 | GO:GO:0055114 |
| InterPro:IPR038290 | UniProt:K4DE18 | InterPro:NADH_Q_OxRdtase_suD | InterPro:NADH_Q_OxRdtase_suD_sf | InterPro:NiFe-Hase_large | PFAM:PF00346 |
| PANTHER:PTHR11993 | SUPFAM:SSF56762 | EnsemblPlantsGene:Solyc12g035590.1 | EnsemblPlants:Solyc12g035590.1.1 | UniParc:UPI0002769E81 | : |
Description
No Description!
Coordinates
chr12:+:56306566..56306890
Molecular Weight (calculated)
7910.1 Da
IEP (calculated)
10.110
GRAVY (calculated)
0.750
Length
68 amino acids
Sequence
(BLAST)
(BLAST)
1: MIVFHTYLRV EAPKGELWIF LIGDLSVFPL RWTIRPPGFI NLQILPQFVK RMILADIMTI LGSIDIIK
001: MAANGRVIII AMLMVAMVMN MTWCVNSKGF VNLGISPEEL QSCIKTCIPE QCMPEANNLT VCEKACHKYC NRPAMSFKPN YVVPVDGNDV GFIKAAFCKL
101: WCEEN
101: WCEEN
Arabidopsis Description
Plant thionin family protein [Source:UniProtKB/TrEMBL;Acc:A7REG5]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.