Factsheet for HORVU3Hr1G055090.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G004810.3	Barley	cytosol	93.6	85.19
HORVU6Hr1G039050.1	Barley	mitochondrion	62.21	84.92
BAV58152	Barley	mitochondrion	94.19	41.12
HORVU0Hr1G033630.1	Barley	mitochondrion	94.19	40.1
HORVU0Hr1G037100.1	Barley	mitochondrion	94.19	40.1
HORVU2Hr1G015540.1	Barley	mitochondrion	92.44	39.36
HORVU0Hr1G033540.1	Barley	cytosol	22.67	22.81
HORVU2Hr1G049060.1	Barley	cytosol	8.72	13.76
HORVU6Hr1G037410.1	Barley	extracellular	22.67	13.49
HORVU5Hr1G042630.1	Barley	cytosol	15.7	12.86
HORVU1Hr1G048080.1	Barley	cytosol	22.67	12.26
HORVU4Hr1G027710.1	Barley	mitochondrion	14.53	11.9
Solyc12g035590.1.1	Tomato	cytosol	4.65	11.76
HORVU5Hr1G005410.1	Barley	cytosol, plastid	22.67	11.17
HORVU0Hr1G024830.2	Barley	cytosol	22.67	9.92
HORVU0Hr1G036480.1	Barley	cytosol, mitochondrion, plastid	22.67	9.92
AGP50801	Barley	cytosol	15.12	7.03
HORVU1Hr1G065340.1	Barley	cytosol	2.33	1.62
HORVU7Hr1G115900.1	Barley	cytosol	0.58	1.54
HORVU6Hr1G040930.1	Barley	cytosol, mitochondrion, nucleus	0.58	0.65
HORVU4Hr1G059530.1	Barley	mitochondrion	0.58	0.42
HORVU3Hr1G075000.1	Barley	cytosol, mitochondrion	0.0	0.0
HORVU5Hr1G093790.1	Barley	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.645.20	MapMan:35.1	UniProt:A0A287L3X1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016651	GO:GO:0048038	GO:GO:0051287
GO:GO:0055114	EnsemblPlantsGene:HORVU3Hr1G055090	EnsemblPlants:HORVU3Hr1G055090.1	InterPro:IPR038290	InterPro:NADH_Q_OxRdtase_suD	InterPro:NADH_Q_OxRdtase_suD_sf
InterPro:NiFe-Hase_large	PFAM:PF00346	PANTHER:PTHR11993	PANTHER:PTHR11993:SF10	SUPFAM:SSF56762	UniParc:UPI000B476D5A

Description

No Description!

Coordinates

chrchr3H:+:409860242..409866241

Molecular Weight (calculated)

19380.2 Da

IEP (calculated)

7.502

GRAVY (calculated)

-0.412

Length

172 amino acids

Sequence
(BLAST)

001: MLRGPGVCWD SRRATPYDVH DQSDLDVPVG TRGDRYDRYC IRIEEMRQSI RIIVQCPNLM PSGMIKADDR KLCPPSQSRM KLSMESSIHH FELYTEGFSI
101: PAPSTYTAVE TPKGEFGVFL VSNGSNRPYR CKIRAPGFAH SQGLDSMSKH HMLADVVTII GTQDIVFGEV DR

Best Arabidopsis Sequence Match ( ATMG00510.1 )
(BLAST)

001: MTTRKRQIKN FTSNFGPQHP AAHGVSRLVL EMNGEVVERA EPHIGSLHRG TEKLIEYKTY LQALPYSDRS DYVSMMAQEH AHSSAVEKLL NCEVPLRAQY
101: IRVLFREITR ISNHSLALTT HAMDVGALTP FLWAFEEREK LLEFYERVSG ARMHASFIRP GGVAQDLPLG LCRDIDSFTQ QFASRIDELE EMSTGNRIWK
201: QRLVDIGTVT AQQAKDWGFS GVMLRGPGVC WDSRRAAPYD VHDQSDLDVP VGTRGDRYDR YCIRIEEMRQ SLRIIVQCLN QMPSGMIKAD DRKLCPPSRC
301: RMKLSMESSI HHFELYTEGF SVPASSTYTA VEAPKGEFGV FLVSNGSNRP YRRKIRAPGS AHSQGLDSMS KHHMPADVVT IIGTQDIVFG EVDR

Arabidopsis Description

NAD7Nad7 [Source:UniProtKB/TrEMBL;Acc:G1C2X4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.