CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
WoLF PSORT:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G036480.1	Barley	cytosol, mitochondrion, plastid	100.0	94.15
HORVU1Hr1G048080.1	Barley	cytosol	79.73	92.77
HORVU3Hr1G075000.1	Barley	cytosol, mitochondrion	49.46	92.42
HORVU0Hr1G024830.2	Barley	cytosol	98.11	92.37
TraesCS2D01G243700.1	Wheat	plastid	98.11	92.37
HORVU6Hr1G037410.1	Barley	extracellular	71.89	92.04
CAA33911	Rice	mitochondrion, plastid	97.3	91.6
TraesCSU01G237200.1	Wheat	cytosol, mitochondrion, plastid	95.95	90.56
TraesCS7B01G080500.1	Wheat	cytosol, mitochondrion, plastid	95.95	90.33
TraesCS1D01G184000.1	Wheat	cytosol, mitochondrion, plastid	94.59	89.29
GRMZM5G853723_P01	Maize	plastid	94.05	88.55
Solyc02g011810.1.1	Tomato	cytosol	13.24	87.5
HORVU4Hr1G027710.1	Barley	mitochondrion	49.19	86.67
HORVU0Hr1G033540.1	Barley	cytosol	40.0	86.55
Solyc01g011410.1.1	Tomato	nucleus	17.03	86.3
HORVU5Hr1G005410.1	Barley	cytosol, plastid	78.38	83.09
VIT_06s0004g07410.t01	Wine grape	cytosol	19.19	78.02
PGSC0003DMT400022652	Potato	mitochondrion	41.08	66.09
HORVU1Hr1G065340.1	Barley	cytosol	41.89	62.75
HORVU2Hr1G049060.1	Barley	cytosol	18.11	61.47
VIT_10s0116g00060.t01	Wine grape	plasma membrane	54.05	45.35
HORVU6Hr1G040930.1	Barley	cytosol, mitochondrion, nucleus	14.86	35.71
HORVU5Hr1G093790.1	Barley	cytosol	3.24	35.29
HORVU4Hr1G059530.1	Barley	mitochondrion	22.7	35.15
HORVU5Hr1G042630.1	Barley	cytosol	18.11	31.9
BAV58152	Barley	mitochondrion	30.27	28.43
HORVU2Hr1G015540.1	Barley	mitochondrion	30.0	27.48
HORVU0Hr1G037100.1	Barley	mitochondrion	30.0	27.48
HORVU0Hr1G033630.1	Barley	mitochondrion	30.0	27.48
HORVU7Hr1G115900.1	Barley	cytosol	3.78	21.54
HORVU3Hr1G055090.1	Barley	cytosol	7.03	15.12
HORVU3Hr1G004810.3	Barley	cytosol	7.3	14.29
HORVU6Hr1G039050.1	Barley	mitochondrion	2.43	7.14
Solyc07g032420.1.1	Tomato	cytosol	1.62	3.23

Protein Annotations

MapMan:1.1.8.1.2.1	Gene3D:1.10.645.20	EnsemblPlants:AGP50801	EnsemblPlantsGene:AGP50801	ProteinID:AGP50801	ProteinID:AGP50801.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536
GO:GO:0016491	GO:GO:0016651	GO:GO:0048038	GO:GO:0051287	GO:GO:0055114	InterPro:IPR038290
ENA:KC912687.1:CDS:join(101953..102168,complement(113967..114863))	InterPro:NADH_Q_OxRdtase_suD	InterPro:NADH_Q_OxRdtase_suD_sf	InterPro:NADH_UbQ_OxRdtase_49kDa_CS	InterPro:NiFe-Hase_large	PFAM:PF00346
ScanProsite:PS00535	PANTHER:PTHR11993	GO:S4Z1B0	UniProt:S4Z1B0	SUPFAM:SSF56762	UniParc:UPI0003585595

Description

ndhHNADH-plastoquinone oxidoreductase subunit 7

Coordinates

chrPt:+:101953..114863

Molecular Weight (calculated)

43116.4 Da

IEP (calculated)

5.532

GRAVY (calculated)

-0.208

Length

370 amino acids

Sequence
(BLAST)

001: MSLPLTKKDL MIVNMGPQHP SMHGVLRLIV TLDGEDVIDC EPILGYLHRG MEKIAENRTI IQYLPYVTRW DYATMFTEAI TVNAPEFLEN IQIPQRASYI
101: RVIMLELSRI ASHLLWLGPF MADLGAQTPF FYIFRERELI YDLFEAATGM RMMHNYFRIG GVAADLPYGW IDKCLDFCDY FLRGVVEYQQ LITQNPIFLE
201: RVEGVGFISG EEAVNWGLSG PMLRASGIQW DLRKVDPYES YNQFDWKVQW QKEGDSLARY LVRVGEMSES IKIIQQAIEK IPGGPYENLE VRRFKKEKNS
301: EWNDFEYKFL GKKPSPNFEL SRQELYVRVE APKGELGIYL VGDDSLFPWR WKIRPPGFIN LQILPQLVKK

Best Arabidopsis Sequence Match ( ATCG01110.1 )
(BLAST)

001: MKRPVTGKDL MIVNMGPHHP SMHGVLRLIV TLDGEDVVDC EPILGYLHRG MEKIAENRAI IQYLPYVTRW DYLATMFTEA ITVNGPEQLG NIQVPKRASY
101: IRVIMLELSR IASHLLWLGP FMADIGAQTP FFYIFREREF VYDLFEAATG MRMMHNFFRI GGIAADLPYG WIDKCLDFCD YFLTEVVEYQ KLITRNPIFL
201: ERVEGVGIIG GEEAINWGLS GPMLRASGIP WDLRKIDRYE SYDEFEWEIQ WQKQGDSLAR YLVRLSEMTE SIKIIQQALE GLPGGPYENL ESRGFDRKRN
301: PEWNDFEYRF ISKKPSPTFE LSKQELYVRV EAPKGELGIF LIGDQSGFPW RWKIRPPGFI NLQILPELVK RMKLADIMTI LGSIDIIMGE VDR

Arabidopsis Description

NDHHNAD(P)H-quinone oxidoreductase subunit H, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P56753]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.