Factsheet for HORVU0Hr1G033540.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G049060.1	Barley	cytosol	51.46	80.73
Solyc10g047460.1.1	Tomato	cytosol	24.56	68.85
HORVU6Hr1G037410.1	Barley	extracellular	100.0	59.17
HORVU4Hr1G027710.1	Barley	mitochondrion	67.84	55.24
HORVU1Hr1G048080.1	Barley	cytosol	100.0	53.77
HORVU5Hr1G005410.1	Barley	cytosol, plastid	100.0	49.0
KRG90337	Soybean	extracellular	30.99	46.09
HORVU0Hr1G024830.2	Barley	cytosol	99.42	43.26
HORVU0Hr1G036480.1	Barley	cytosol, mitochondrion, plastid	99.42	43.26
AGP50801	Barley	cytosol	86.55	40.0
HORVU3Hr1G055090.1	Barley	cytosol	22.81	22.67
HORVU3Hr1G004810.3	Barley	cytosol	21.64	19.58
HORVU6Hr1G039050.1	Barley	mitochondrion	11.11	15.08
BAV58152	Barley	mitochondrion	22.22	9.64
HORVU0Hr1G037100.1	Barley	mitochondrion	22.22	9.41
HORVU0Hr1G033630.1	Barley	mitochondrion	22.22	9.41
HORVU2Hr1G015540.1	Barley	mitochondrion	21.05	8.91
HORVU5Hr1G042630.1	Barley	cytosol	8.19	6.67
HORVU7Hr1G115900.1	Barley	cytosol	1.75	4.62
HORVU1Hr1G065340.1	Barley	cytosol	5.85	4.05
HORVU6Hr1G040930.1	Barley	cytosol, mitochondrion, nucleus	1.17	1.3
HORVU4Hr1G059530.1	Barley	mitochondrion	1.17	0.84
Solyc10g047470.1.1	Tomato	mitochondrion	0.0	0.0
HORVU5Hr1G093790.1	Barley	cytosol	0.0	0.0
HORVU3Hr1G075000.1	Barley	cytosol, mitochondrion	0.0	0.0

Protein Annotations

Gene3D:1.10.645.20	MapMan:35.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152
GO:GO:0009507	GO:GO:0009536	GO:GO:0016651	GO:GO:0048038	GO:GO:0051287	GO:GO:0055114
EnsemblPlantsGene:HORVU0Hr1G033540	EnsemblPlants:HORVU0Hr1G033540.1	InterPro:IPR038290	UniProt:M0XVC5	InterPro:NADH_Q_OxRdtase_suD	InterPro:NADH_Q_OxRdtase_suD_sf
InterPro:NiFe-Hase_large	PFAM:PF00346	PANTHER:PTHR11993	PANTHER:PTHR11993:SF27	SUPFAM:SSF56762	UniParc:UPI000295062F

Description

NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [Source:UniProtKB/TrEMBL;Acc:M0XVC5]

Coordinates

chrchrUn:+:203045717..203046232

Molecular Weight (calculated)

20141.4 Da

IEP (calculated)

9.207

GRAVY (calculated)

-0.512

Length

171 amino acids

Sequence
(BLAST)

001: MLRASGIQWD LRKVDPYESY NQFDWKVQWQ KEGDSLARYL VRVGEMSESI KIIQQAIEKI PGGPYENLEV RRFKKEKNSE WNDFEYKFLG KKPSPNFELS
101: RQELYVRVEA PKGELGIYLV GDDSLFPWRW KIRPPGFINL QILPQLVKKM KLADIMTILG SIDIIMGEVD R

Best Arabidopsis Sequence Match ( ATCG01110.1 )
(BLAST)

001: MKRPVTGKDL MIVNMGPHHP SMHGVLRLIV TLDGEDVVDC EPILGYLHRG MEKIAENRAI IQYLPYVTRW DYLATMFTEA ITVNGPEQLG NIQVPKRASY
101: IRVIMLELSR IASHLLWLGP FMADIGAQTP FFYIFREREF VYDLFEAATG MRMMHNFFRI GGIAADLPYG WIDKCLDFCD YFLTEVVEYQ KLITRNPIFL
201: ERVEGVGIIG GEEAINWGLS GPMLRASGIP WDLRKIDRYE SYDEFEWEIQ WQKQGDSLAR YLVRLSEMTE SIKIIQQALE GLPGGPYENL ESRGFDRKRN
301: PEWNDFEYRF ISKKPSPTFE LSKQELYVRV EAPKGELGIF LIGDQSGFPW RWKIRPPGFI NLQILPELVK RMKLADIMTI LGSIDIIMGE VDR

Arabidopsis Description

NDHHNAD(P)H-quinone oxidoreductase subunit H, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P56753]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.