CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g047460.1.1	Tomato	cytosol	26.96	50.82
HORVU0Hr1G033540.1	Barley	cytosol	46.09	30.99
KRG99586	Soybean	cytosol, mitochondrion, plastid	52.17	18.02
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus	16.52	6.67
KRH01226	Soybean	cytosol	4.35	5.49
Solyc10g047470.1.1	Tomato	mitochondrion	1.74	2.17
KRH15676	Soybean	mitochondrion	1.74	1.02

Protein Annotations

Gene3D:1.10.645.20	MapMan:35.1	EMBL:ACUP02012601	EnsemblPlantsGene:GLYMA_20G084200	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016651	GO:GO:0048038
GO:GO:0051287	GO:GO:0055114	InterPro:IPR038290	UniProt:K7N2B6	EnsemblPlants:KRG90337	ProteinID:KRG90337
ProteinID:KRG90337.1	InterPro:NADH_Q_OxRdtase_suD	InterPro:NADH_Q_OxRdtase_suD_sf	InterPro:NiFe-Hase_large	PFAM:PF00346	PANTHER:PTHR11993
PANTHER:PTHR11993:SF27	SUPFAM:SSF56762	SignalP:SignalP-noTM	UniParc:UPI000295033D	SEG:seg	:

Description

hypothetical protein

Coordinates

chr20:+:31638437..31639151

Molecular Weight (calculated)

13562.2 Da

IEP (calculated)

4.496

GRAVY (calculated)

-0.370

Length

115 amino acids

Sequence
(BLAST)

001: MVATMRWCLN FRCFLLNGLL ALHNAAPHMR SGMTCNNAIT YKCYEEFDWE VQWQKEGDSL ARYLVRIGEM MESIKIIQQA LEGIPGGPYE NLEIRCFDRE
101: KEPEWNEFET NESIF

Best Arabidopsis Sequence Match ( ATCG01110.1 )
(BLAST)

001: MKRPVTGKDL MIVNMGPHHP SMHGVLRLIV TLDGEDVVDC EPILGYLHRG MEKIAENRAI IQYLPYVTRW DYLATMFTEA ITVNGPEQLG NIQVPKRASY
101: IRVIMLELSR IASHLLWLGP FMADIGAQTP FFYIFREREF VYDLFEAATG MRMMHNFFRI GGIAADLPYG WIDKCLDFCD YFLTEVVEYQ KLITRNPIFL
201: ERVEGVGIIG GEEAINWGLS GPMLRASGIP WDLRKIDRYE SYDEFEWEIQ WQKQGDSLAR YLVRLSEMTE SIKIIQQALE GLPGGPYENL ESRGFDRKRN
301: PEWNDFEYRF ISKKPSPTFE LSKQELYVRV EAPKGELGIF LIGDQSGFPW RWKIRPPGFI NLQILPELVK RMKLADIMTI LGSIDIIMGE VDR

Arabidopsis Description

NDHHNAD(P)H-quinone oxidoreductase subunit H, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P56753]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.