Factsheet for GSMUA_AchrUn_randomP14220_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G004810.3	Barley	cytosol	47.72	71.96
Bra010822.1-P	Field mustard	cytosol, mitochondrion, plastid	7.72	30.99
CDX90199	Canola	cytosol, mitochondrion, plastid	8.42	26.97
VIT_00s0246g00080.t01	Wine grape	cytosol, mitochondrion, nucleus	27.72	26.51
PGSC0003DMT400022652	Potato	mitochondrion	15.09	18.7
KRH01226	Soybean	cytosol	5.96	18.68
TraesCS5D01G376800.1	Wheat	cytosol, mitochondrion, plastid	15.79	18.52
CDX95226	Canola	cytosol	14.04	16.67
CDY19660	Canola	cytosol	14.04	16.67
CDY21195	Canola	cytosol	14.04	16.67
KRG90337	Soybean	extracellular	6.67	16.52
TraesCS1B01G405900.1	Wheat	cytosol	19.3	16.04
GRMZM5G853723_P01	Maize	plastid	20.7	15.01
TraesCS1D01G184000.1	Wheat	cytosol, mitochondrion, plastid	20.35	14.8
TraesCS2D01G243700.1	Wheat	plastid	20.35	14.76
CAA33911	Rice	mitochondrion, plastid	20.0	14.5
TraesCSU01G237200.1	Wheat	cytosol, mitochondrion, plastid	19.3	14.03
TraesCS7B01G080500.1	Wheat	cytosol, mitochondrion, plastid	18.95	13.74
ATCG01110.1	Thale cress	cytosol	18.25	13.23
CDY03033	Canola	plastid	18.25	13.23
Solyc12g035590.1.1	Tomato	cytosol	2.46	10.29
KRG99586	Soybean	cytosol, mitochondrion, plastid	8.77	7.51
CDY21194	Canola	cytosol	2.11	4.44
CDY19659	Canola	cytosol	2.11	4.44
CDX95225	Canola	cytosol	2.11	4.44
TraesCS3D01G177500.1	Wheat	cytosol	1.05	4.23
CAA33949	Rice	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.645.20	MapMan:35.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0009507	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0009987
GO:GO:0015979	GO:GO:0016020	GO:GO:0016491	GO:GO:0016651	GO:GO:0016655	GO:GO:0019684
GO:GO:0048038	GO:GO:0051287	GO:GO:0055114	EnsemblPlantsGene:GSMUA_AchrUn_randomG14220_001	EnsemblPlants:GSMUA_AchrUn_randomP14220_001	EnsemblPlants:GSMUA_AchrUn_randomT14220_001
InterPro:IPR038290	UniProt:M0U931	InterPro:NADH_Q_OxRdtase_suD	InterPro:NADH_Q_OxRdtase_suD_sf	InterPro:NiFe-Hase_large	PFAM:PF00346
PANTHER:PTHR11993	PANTHER:PTHR11993:SF10	SUPFAM:SSF56762	UniParc:UPI000294F491	:	:

Description

NADH-ubiquinone oxidoreductase 49 kDa subunit [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG14220_001]

Coordinates

chrchrUn_random:+:67069326..67072331

Molecular Weight (calculated)

32331.3 Da

IEP (calculated)

9.603

GRAVY (calculated)

-0.559

Length

285 amino acids

Sequence
(BLAST)

001: MDVGASTPFL WAFEEREKLL EFYERVPGAR MHASFIRPGG MSTSNRIWKQ RLVDIGTVTA QQAKDWGFSG WAYQSKPGVC WDSRKAAPYD VHDQSDPDVP
101: VGTRGDRYDR YCIRIEEMRQ SVRIIVQCPN QMPKQACRRT TAVPFFIRNN RYHILISSML SFRFNQSVLN KRDPFQAMTK SIDRKPHDGK LSRSSVYSTS
201: IHHFEPYTEG FSVPAPSTYT AVEAPKGEFG VYLVSNGSNR PYRCKIRAPG SAHSQGLDSM SKHHMPADVV TIIGTQDIVS GEVDR

Best Arabidopsis Sequence Match ( ATMG00510.1 )
(BLAST)

001: MTTRKRQIKN FTSNFGPQHP AAHGVSRLVL EMNGEVVERA EPHIGSLHRG TEKLIEYKTY LQALPYSDRS DYVSMMAQEH AHSSAVEKLL NCEVPLRAQY
101: IRVLFREITR ISNHSLALTT HAMDVGALTP FLWAFEEREK LLEFYERVSG ARMHASFIRP GGVAQDLPLG LCRDIDSFTQ QFASRIDELE EMSTGNRIWK
201: QRLVDIGTVT AQQAKDWGFS GVMLRGPGVC WDSRRAAPYD VHDQSDLDVP VGTRGDRYDR YCIRIEEMRQ SLRIIVQCLN QMPSGMIKAD DRKLCPPSRC
301: RMKLSMESSI HHFELYTEGF SVPASSTYTA VEAPKGEFGV FLVSNGSNRP YRRKIRAPGS AHSQGLDSMS KHHMPADVVT IIGTQDIVFG EVDR

Arabidopsis Description

NAD7Nad7 [Source:UniProtKB/TrEMBL;Acc:G1C2X4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.