Factsheet for ATCG01110.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY03033	Canola	plastid	98.98	98.98
Bra010822.1-P	Field mustard	cytosol, mitochondrion, plastid	15.78	87.32
CAA33911	Rice	mitochondrion, plastid	84.99	84.99
GRMZM5G853723_P01	Maize	plastid	84.22	84.22
TraesCS2D01G243700.1	Wheat	plastid	84.22	84.22
HORVU3Hr1G075000.1	Barley	cytosol, mitochondrion	42.24	83.84
TraesCS1B01G405900.1	Wheat	cytosol	73.03	83.67
TraesCSU01G237200.1	Wheat	cytosol, mitochondrion, plastid	82.44	82.65
TraesCS1D01G184000.1	Wheat	cytosol, mitochondrion, plastid	81.93	82.14
TraesCS7B01G080500.1	Wheat	cytosol, mitochondrion, plastid	81.93	81.93
Solyc08g022170.1.1	Tomato	plastid	27.99	81.48
TraesCS5D01G376800.1	Wheat	cytosol, mitochondrion, plastid	50.13	81.07
CDX90199	Canola	cytosol, mitochondrion, plastid	18.32	80.9
PGSC0003DMT400022652	Potato	mitochondrion	46.06	78.7
VIT_06s0004g07410.t01	Wine grape	cytosol	18.07	78.02
KRG99586	Soybean	cytosol, mitochondrion, plastid	64.89	76.58
Solyc08g022160.1.1	Tomato	cytosol	12.47	67.12
HORVU1Hr1G065340.1	Barley	cytosol	36.13	57.49
VIT_10s0116g00060.t01	Wine grape	plasma membrane	56.49	50.34
ATMG00510.1	Thale cress	mitochondrion	30.79	30.71
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus	13.23	18.25

Protein Annotations

MapMan:1.1.8.1.2.1	Gene3D:1.10.645.20	EntrezGene:844805	UniProt:A0A1B1W502	ProteinID:ANW47845.1	ArrayExpress:ATCG01110
EnsemblPlantsGene:ATCG01110	RefSeq:ATCG01110	TAIR:ATCG01110	RefSeq:ATCG01110-TAIR-G	EnsemblPlants:ATCG01110.1	TAIR:ATCG01110.1
ProteinID:BAA84443.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003959	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0009507	GO:GO:0009534	GO:GO:0009535	GO:GO:0009536	GO:GO:0009570
GO:GO:0009579	GO:GO:0009987	GO:GO:0015979	GO:GO:0016020	GO:GO:0016491	GO:GO:0016651
GO:GO:0016655	GO:GO:0019684	GO:GO:0048038	GO:GO:0051287	GO:GO:0055114	InterPro:IPR038290
HAMAP:MF_01358	InterPro:NADH_Q_OxRdtase_suD	InterPro:NADH_Q_OxRdtase_suD_sf	InterPro:NADH_UbQ_OxRdtase_49kDa_CS	InterPro:NDH1_su_D/H	Symbol:NDHH
RefSeq:NP_051115.1	InterPro:NiFe-Hase_large	UniProt:P56753	PFAM:PF00346	ScanProsite:PS00535	PANTHER:PTHR11993
SUPFAM:SSF56762	UniParc:UPI00001308B3	SEG:seg	:	:	:

Description

NDHHNAD(P)H-quinone oxidoreductase subunit H, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P56753]

Coordinates

chrPt:-:122011..123192

Molecular Weight (calculated)

45505.4 Da

IEP (calculated)

5.221

GRAVY (calculated)

-0.154

Length

393 amino acids

Sequence
(BLAST)

001: MKRPVTGKDL MIVNMGPHHP SMHGVLRLIV TLDGEDVVDC EPILGYLHRG MEKIAENRAI IQYLPYVTRW DYLATMFTEA ITVNGPEQLG NIQVPKRASY
101: IRVIMLELSR IASHLLWLGP FMADIGAQTP FFYIFREREF VYDLFEAATG MRMMHNFFRI GGIAADLPYG WIDKCLDFCD YFLTEVVEYQ KLITRNPIFL
201: ERVEGVGIIG GEEAINWGLS GPMLRASGIP WDLRKIDRYE SYDEFEWEIQ WQKQGDSLAR YLVRLSEMTE SIKIIQQALE GLPGGPYENL ESRGFDRKRN
301: PEWNDFEYRF ISKKPSPTFE LSKQELYVRV EAPKGELGIF LIGDQSGFPW RWKIRPPGFI NLQILPELVK RMKLADIMTI LGSIDIIMGE VDR

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.