Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX95225 | Canola | cytosol | 46.56 | 85.19 |
| CDY19659 | Canola | cytosol | 46.56 | 85.19 |
| CDY21194 | Canola | cytosol | 46.56 | 85.19 |
| Solyc08g022170.1.1 | Tomato | plastid | 44.13 | 80.74 |
| HORVU3Hr1G075000.1 | Barley | cytosol, mitochondrion | 56.68 | 70.71 |
| AGP50801 | Barley | cytosol | 62.75 | 41.89 |
| HORVU0Hr1G036480.1 | Barley | cytosol, mitochondrion, plastid | 63.16 | 39.69 |
| KRG99586 | Soybean | cytosol, mitochondrion, plastid | 53.44 | 39.64 |
| HORVU0Hr1G024830.2 | Barley | cytosol | 60.32 | 37.91 |
| ATCG01110.1 | Thale cress | cytosol | 57.49 | 36.13 |
| HORVU1Hr1G048080.1 | Barley | cytosol | 34.82 | 27.04 |
| HORVU5Hr1G093790.1 | Barley | cytosol | 3.64 | 26.47 |
| HORVU4Hr1G059530.1 | Barley | mitochondrion | 25.51 | 26.36 |
| HORVU5Hr1G005410.1 | Barley | cytosol, plastid | 33.2 | 23.5 |
| HORVU6Hr1G040930.1 | Barley | cytosol, mitochondrion, nucleus | 13.77 | 22.08 |
| HORVU6Hr1G037410.1 | Barley | extracellular | 23.08 | 19.72 |
| BAV58152 | Barley | mitochondrion | 27.94 | 17.51 |
| HORVU5Hr1G042630.1 | Barley | cytosol | 14.57 | 17.14 |
| HORVU0Hr1G033630.1 | Barley | mitochondrion | 27.53 | 16.83 |
| HORVU0Hr1G037100.1 | Barley | mitochondrion | 27.53 | 16.83 |
| HORVU2Hr1G015540.1 | Barley | mitochondrion | 27.53 | 16.83 |
| Bra010822.1-P | Field mustard | cytosol, mitochondrion, plastid | 4.05 | 14.08 |
| HORVU4Hr1G027710.1 | Barley | mitochondrion | 6.48 | 7.62 |
| CDY21195 | Canola | cytosol | 6.07 | 6.25 |
| CDX95226 | Canola | cytosol | 6.07 | 6.25 |
| CDY19660 | Canola | cytosol | 6.07 | 6.25 |
| HORVU0Hr1G033540.1 | Barley | cytosol | 4.05 | 5.85 |
| Solyc08g022160.1.1 | Tomato | cytosol | 1.62 | 5.48 |
| HORVU7Hr1G115900.1 | Barley | cytosol | 1.21 | 4.62 |
| HORVU3Hr1G004810.3 | Barley | cytosol | 2.02 | 2.65 |
| HORVU3Hr1G055090.1 | Barley | cytosol | 1.62 | 2.33 |
| HORVU6Hr1G039050.1 | Barley | mitochondrion | 0.0 | 0.0 |
| HORVU2Hr1G049060.1 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G065340.1 | EnsemblPlantsGene:HORVU1Hr1G065340 | Gene3D:1.10.645.20 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016651 | GO:GO:0055114 | InterPro:IPR038290 | InterPro:NADH_Q_OxRdtase_suD_sf | InterPro:NADH_UbQ_OxRdtase_49kDa_CS |
| InterPro:NiFe-Hase_large | ncoils:Coil | ScanProsite:PS00535 | SEG:seg | SUPFAM:SSF56762 | MapMan:35.1 |
Description
No Description!
Coordinates
chrchr1H:-:466949576..466950316
Molecular Weight (calculated)
24876.9 Da
IEP (calculated)
5.746
GRAVY (calculated)
-0.138
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLPLTKKDL MIVNMGPQHP SMHGVLRLIV TLDGEDVIDC EPILGYLHRG MEKIAENRTI IQYLPYVTRW DYLATMFTEA ITVNAPEFLE NIQIPQRASY
101: IRVIMLELSR IASHLLWLGP FMADLGAQTP FFYIFREREL IYDLFEAFQH IGXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXEFRS VPDCEDPFDY
201: VGSSASRRHS SSKRDLRQDD HFPRYHYYHC HASYFDAIDY VSLPTTC
101: IRVIMLELSR IASHLLWLGP FMADLGAQTP FFYIFREREL IYDLFEAFQH IGXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXEFRS VPDCEDPFDY
201: VGSSASRRHS SSKRDLRQDD HFPRYHYYHC HASYFDAIDY VSLPTTC
001: MKRPVTGKDL MIVNMGPHHP SMHGVLRLIV TLDGEDVVDC EPILGYLHRG MEKIAENRAI IQYLPYVTRW DYLATMFTEA ITVNGPEQLG NIQVPKRASY
101: IRVIMLELSR IASHLLWLGP FMADIGAQTP FFYIFREREF VYDLFEAATG MRMMHNFFRI GGIAADLPYG WIDKCLDFCD YFLTEVVEYQ KLITRNPIFL
201: ERVEGVGIIG GEEAINWGLS GPMLRASGIP WDLRKIDRYE SYDEFEWEIQ WQKQGDSLAR YLVRLSEMTE SIKIIQQALE GLPGGPYENL ESRGFDRKRN
301: PEWNDFEYRF ISKKPSPTFE LSKQELYVRV EAPKGELGIF LIGDQSGFPW RWKIRPPGFI NLQILPELVK RMKLADIMTI LGSIDIIMGE VDR
101: IRVIMLELSR IASHLLWLGP FMADIGAQTP FFYIFREREF VYDLFEAATG MRMMHNFFRI GGIAADLPYG WIDKCLDFCD YFLTEVVEYQ KLITRNPIFL
201: ERVEGVGIIG GEEAINWGLS GPMLRASGIP WDLRKIDRYE SYDEFEWEIQ WQKQGDSLAR YLVRLSEMTE SIKIIQQALE GLPGGPYENL ESRGFDRKRN
301: PEWNDFEYRF ISKKPSPTFE LSKQELYVRV EAPKGELGIF LIGDQSGFPW RWKIRPPGFI NLQILPELVK RMKLADIMTI LGSIDIIMGE VDR
Arabidopsis Description
NDHHNAD(P)H-quinone oxidoreductase subunit H, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P56753]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.