Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G037410.1 | Barley | extracellular | 90.88 | 100.0 |
| HORVU0Hr1G033540.1 | Barley | cytosol | 53.77 | 100.0 |
| HORVU5Hr1G005410.1 | Barley | cytosol, plastid | 97.17 | 88.54 |
| HORVU4Hr1G027710.1 | Barley | mitochondrion | 57.23 | 86.67 |
| Solyc01g011410.1.1 | Tomato | nucleus | 19.81 | 86.3 |
| HORVU2Hr1G049060.1 | Barley | cytosol | 27.67 | 80.73 |
| HORVU0Hr1G024830.2 | Barley | cytosol | 99.69 | 80.66 |
| HORVU0Hr1G036480.1 | Barley | cytosol, mitochondrion, plastid | 99.69 | 80.66 |
| AGP50801 | Barley | cytosol | 92.77 | 79.73 |
| TraesCS2D01G243700.1 | Wheat | plastid | 97.48 | 78.88 |
| TraesCSU01G237200.1 | Wheat | cytosol, mitochondrion, plastid | 97.17 | 78.83 |
| TraesCS7B01G080500.1 | Wheat | cytosol, mitochondrion, plastid | 96.86 | 78.37 |
| CAA33911 | Rice | mitochondrion, plastid | 96.86 | 78.37 |
| TraesCS1D01G184000.1 | Wheat | cytosol, mitochondrion, plastid | 95.6 | 77.55 |
| GRMZM5G853723_P01 | Maize | plastid | 95.6 | 77.35 |
| PGSC0003DMT400022652 | Potato | mitochondrion | 54.4 | 75.22 |
| HORVU3Hr1G075000.1 | Barley | cytosol, mitochondrion | 37.74 | 60.61 |
| Solyc02g011810.1.1 | Tomato | cytosol | 8.49 | 48.21 |
| VIT_10s0116g00060.t01 | Wine grape | plasma membrane | 66.67 | 48.07 |
| HORVU6Hr1G040930.1 | Barley | cytosol, mitochondrion, nucleus | 17.3 | 35.71 |
| HORVU5Hr1G093790.1 | Barley | cytosol | 3.77 | 35.29 |
| HORVU1Hr1G065340.1 | Barley | cytosol | 27.04 | 34.82 |
| HORVU5Hr1G042630.1 | Barley | cytosol | 21.07 | 31.9 |
| BAV58152 | Barley | mitochondrion | 28.62 | 23.1 |
| HORVU3Hr1G055090.1 | Barley | cytosol | 12.26 | 22.67 |
| HORVU0Hr1G037100.1 | Barley | mitochondrion | 28.62 | 22.52 |
| HORVU0Hr1G033630.1 | Barley | mitochondrion | 28.62 | 22.52 |
| HORVU2Hr1G015540.1 | Barley | mitochondrion | 28.3 | 22.28 |
| HORVU4Hr1G059530.1 | Barley | mitochondrion | 16.67 | 22.18 |
| HORVU7Hr1G115900.1 | Barley | cytosol | 4.4 | 21.54 |
| HORVU3Hr1G004810.3 | Barley | cytosol | 12.26 | 20.63 |
| HORVU6Hr1G039050.1 | Barley | mitochondrion | 5.97 | 15.08 |
| VIT_06s0004g07410.t01 | Wine grape | cytosol | 3.46 | 12.09 |
| Solyc07g032420.1.1 | Tomato | cytosol | 2.2 | 3.76 |
Protein Annotations
| MapMan:1.1.8.1.2.1 | Gene3D:1.10.645.20 | UniProt:A0A287FFY9 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016651 | GO:GO:0048038 | GO:GO:0051287 |
| GO:GO:0055114 | EnsemblPlantsGene:HORVU1Hr1G048080 | EnsemblPlants:HORVU1Hr1G048080.1 | InterPro:IPR038290 | InterPro:NADH_Q_OxRdtase_suD | InterPro:NADH_Q_OxRdtase_suD_sf |
| InterPro:NiFe-Hase_large | PFAM:PF00346 | PANTHER:PTHR11993 | PANTHER:PTHR11993:SF27 | SUPFAM:SSF56762 | UniParc:UPI000B46E1B4 |
Description
No Description!
Coordinates
chrchr1H:+:355728452..355729637
Molecular Weight (calculated)
37039.0 Da
IEP (calculated)
5.020
GRAVY (calculated)
-0.177
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MFTEAITVNA PEFLENIQIP QRASYIRVIM LELSRIASHL LWLGPFMADL GAQTPFFYIF RERELIYDLF EAATGMRMMH NYFRIGGVAA DLPYGWIDKC
101: LDFCDYFLRG VVEYQQLITQ NPIFLERVEG VGFISGEEAV NWGLSGPMLR ASGIQWDLRK VDPYESYNQF DWKVQWQKEG DSLARYLVRV GEMSESIKII
201: QQAIEKIPGG PYENLEVRRF KKEKNSEWND FEYKFLGKKP SPNFELSRQE LYVRVEAPKG ELGIYLVGDD SLFPWRWKIR PPGFINLQIL PQLVKKMKLA
301: DIMTILGSID IIMGEVDR
101: LDFCDYFLRG VVEYQQLITQ NPIFLERVEG VGFISGEEAV NWGLSGPMLR ASGIQWDLRK VDPYESYNQF DWKVQWQKEG DSLARYLVRV GEMSESIKII
201: QQAIEKIPGG PYENLEVRRF KKEKNSEWND FEYKFLGKKP SPNFELSRQE LYVRVEAPKG ELGIYLVGDD SLFPWRWKIR PPGFINLQIL PQLVKKMKLA
301: DIMTILGSID IIMGEVDR
001: MKRPVTGKDL MIVNMGPHHP SMHGVLRLIV TLDGEDVVDC EPILGYLHRG MEKIAENRAI IQYLPYVTRW DYLATMFTEA ITVNGPEQLG NIQVPKRASY
101: IRVIMLELSR IASHLLWLGP FMADIGAQTP FFYIFREREF VYDLFEAATG MRMMHNFFRI GGIAADLPYG WIDKCLDFCD YFLTEVVEYQ KLITRNPIFL
201: ERVEGVGIIG GEEAINWGLS GPMLRASGIP WDLRKIDRYE SYDEFEWEIQ WQKQGDSLAR YLVRLSEMTE SIKIIQQALE GLPGGPYENL ESRGFDRKRN
301: PEWNDFEYRF ISKKPSPTFE LSKQELYVRV EAPKGELGIF LIGDQSGFPW RWKIRPPGFI NLQILPELVK RMKLADIMTI LGSIDIIMGE VDR
101: IRVIMLELSR IASHLLWLGP FMADIGAQTP FFYIFREREF VYDLFEAATG MRMMHNFFRI GGIAADLPYG WIDKCLDFCD YFLTEVVEYQ KLITRNPIFL
201: ERVEGVGIIG GEEAINWGLS GPMLRASGIP WDLRKIDRYE SYDEFEWEIQ WQKQGDSLAR YLVRLSEMTE SIKIIQQALE GLPGGPYENL ESRGFDRKRN
301: PEWNDFEYRF ISKKPSPTFE LSKQELYVRV EAPKGELGIF LIGDQSGFPW RWKIRPPGFI NLQILPELVK RMKLADIMTI LGSIDIIMGE VDR
Arabidopsis Description
NDHHNAD(P)H-quinone oxidoreductase subunit H, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P56753]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.