Factsheet for HORVU6Hr1G037410.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
cytosol 1
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, plastid, secretory
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G033540.1	Barley	cytosol	59.17	100.0
HORVU1Hr1G048080.1	Barley	cytosol	100.0	90.88
HORVU4Hr1G027710.1	Barley	mitochondrion	62.98	86.67
Solyc01g011410.1.1	Tomato	nucleus	21.8	86.3
HORVU5Hr1G005410.1	Barley	cytosol, plastid	99.31	82.23
HORVU2Hr1G049060.1	Barley	cytosol	30.45	80.73
PGSC0003DMT400022652	Potato	mitochondrion	59.86	75.22
HORVU0Hr1G024830.2	Barley	cytosol	99.65	73.28
HORVU0Hr1G036480.1	Barley	cytosol, mitochondrion, plastid	99.65	73.28
AGP50801	Barley	cytosol	92.04	71.89
TraesCS2D01G243700.1	Wheat	plastid	97.23	71.5
TraesCSU01G237200.1	Wheat	cytosol, mitochondrion, plastid	96.89	71.43
TraesCS7B01G080500.1	Wheat	cytosol, mitochondrion, plastid	96.89	71.25
CAA33911	Rice	mitochondrion, plastid	96.54	70.99
GRMZM5G853723_P01	Maize	plastid	95.5	70.23
TraesCS1D01G184000.1	Wheat	cytosol, mitochondrion, plastid	95.16	70.15
HORVU3Hr1G075000.1	Barley	cytosol, mitochondrion	31.49	45.96
Solyc02g011810.1.1	Tomato	cytosol	8.65	44.64
VIT_10s0116g00060.t01	Wine grape	plasma membrane	65.05	42.63
HORVU5Hr1G093790.1	Barley	cytosol	4.15	35.29
HORVU6Hr1G040930.1	Barley	cytosol, mitochondrion, nucleus	14.53	27.27
HORVU5Hr1G042630.1	Barley	cytosol	18.69	25.71
HORVU1Hr1G065340.1	Barley	cytosol	19.72	23.08
HORVU3Hr1G055090.1	Barley	cytosol	13.49	22.67
HORVU7Hr1G115900.1	Barley	cytosol	4.84	21.54
HORVU3Hr1G004810.3	Barley	cytosol	13.49	20.63
BAV58152	Barley	mitochondrion	26.99	19.8
HORVU0Hr1G037100.1	Barley	mitochondrion	26.99	19.31
HORVU0Hr1G033630.1	Barley	mitochondrion	26.99	19.31
HORVU2Hr1G015540.1	Barley	mitochondrion	26.64	19.06
HORVU4Hr1G059530.1	Barley	mitochondrion	13.84	16.74
HORVU6Hr1G039050.1	Barley	mitochondrion	6.57	15.08
Solyc07g032420.1.1	Tomato	cytosol	2.42	3.76
VIT_06s0004g07410.t01	Wine grape	cytosol	0.35	1.1

Protein Annotations

MapMan:1.1.8.1.2.1	Gene3D:1.10.645.20	UniProt:A0A287TY54	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016651	GO:GO:0048038	GO:GO:0051287
GO:GO:0055114	EnsemblPlantsGene:HORVU6Hr1G037410	EnsemblPlants:HORVU6Hr1G037410.1	InterPro:IPR038290	InterPro:NADH_Q_OxRdtase_suD	InterPro:NADH_Q_OxRdtase_suD_sf
InterPro:NiFe-Hase_large	PFAM:PF00346	PANTHER:PTHR11993	PANTHER:PTHR11993:SF27	SUPFAM:SSF56762	UniParc:UPI000B473CB5

Description

No Description!

Coordinates

chrchr6H:+:187172049..187173234

Molecular Weight (calculated)

33691.9 Da

IEP (calculated)

5.112

GRAVY (calculated)

-0.220

Length

289 amino acids

Sequence
(BLAST)

001: MLELSRIASH LLWLGPFMAD LGAQTPFFYI FRERELIYDL FEAATGMRMM HNYFRIGGVA ADLPYGWIDK CLDFCDYFLR GVVEYQQLIT QNPIFLERVE
101: GVGFISGEEA VNWGLSGPML RASGIQWDLR KVDPYESYNQ FDWKVQWQKE GDSLARYLVR VGEMSESIKI IQQAIEKIPG GPYENLEVRR FKKEKNSEWN
201: DFEYKFLGKK PSPNFELSRQ ELYVRVEAPK GELGIYLVGD DSLFPWRWKI RPPGFINLQI LPQLVKKMKL ADIMTILGSI DIIMGEVDR

Best Arabidopsis Sequence Match ( ATCG01110.1 )
(BLAST)

001: MKRPVTGKDL MIVNMGPHHP SMHGVLRLIV TLDGEDVVDC EPILGYLHRG MEKIAENRAI IQYLPYVTRW DYLATMFTEA ITVNGPEQLG NIQVPKRASY
101: IRVIMLELSR IASHLLWLGP FMADIGAQTP FFYIFREREF VYDLFEAATG MRMMHNFFRI GGIAADLPYG WIDKCLDFCD YFLTEVVEYQ KLITRNPIFL
201: ERVEGVGIIG GEEAINWGLS GPMLRASGIP WDLRKIDRYE SYDEFEWEIQ WQKQGDSLAR YLVRLSEMTE SIKIIQQALE GLPGGPYENL ESRGFDRKRN
301: PEWNDFEYRF ISKKPSPTFE LSKQELYVRV EAPKGELGIF LIGDQSGFPW RWKIRPPGFI NLQILPELVK RMKLADIMTI LGSIDIIMGE VDR

Arabidopsis Description

NDHHNAD(P)H-quinone oxidoreductase subunit H, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P56753]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.