Factsheet for HORVU3Hr1G004810.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G055090.1	Barley	cytosol	85.19	93.6
HORVU6Hr1G039050.1	Barley	mitochondrion	59.79	89.68
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus	71.96	47.72
BAV58152	Barley	mitochondrion	91.01	43.65
HORVU0Hr1G033630.1	Barley	mitochondrion	91.01	42.57
HORVU0Hr1G037100.1	Barley	mitochondrion	91.01	42.57
HORVU2Hr1G015540.1	Barley	mitochondrion	88.89	41.58
VIT_00s0246g00080.t01	Wine grape	cytosol, mitochondrion, nucleus	41.27	26.17
HORVU0Hr1G033540.1	Barley	cytosol	19.58	21.64
HORVU5Hr1G042630.1	Barley	cytosol	16.4	14.76
HORVU6Hr1G037410.1	Barley	extracellular	20.63	13.49
HORVU2Hr1G049060.1	Barley	cytosol	7.41	12.84
HORVU4Hr1G027710.1	Barley	mitochondrion	13.76	12.38
HORVU1Hr1G048080.1	Barley	cytosol	20.63	12.26
HORVU5Hr1G005410.1	Barley	cytosol, plastid	20.63	11.17
HORVU0Hr1G036480.1	Barley	cytosol, mitochondrion, plastid	20.63	9.92
HORVU0Hr1G024830.2	Barley	cytosol	20.63	9.92
AGP50801	Barley	cytosol	14.29	7.3
HORVU7Hr1G115900.1	Barley	cytosol	2.12	6.15
HORVU6Hr1G040930.1	Barley	cytosol, mitochondrion, nucleus	2.65	3.25
HORVU4Hr1G059530.1	Barley	mitochondrion	2.65	2.09
HORVU1Hr1G065340.1	Barley	cytosol	2.65	2.02
HORVU3Hr1G075000.1	Barley	cytosol, mitochondrion	0.53	0.51
HORVU5Hr1G093790.1	Barley	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.645.20	MapMan:35.1	UniProt:A0A287JZG3	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016651	GO:GO:0048038	GO:GO:0051287
GO:GO:0055114	EnsemblPlantsGene:HORVU3Hr1G004810	EnsemblPlants:HORVU3Hr1G004810.3	InterPro:IPR038290	InterPro:NADH_Q_OxRdtase_suD	InterPro:NADH_Q_OxRdtase_suD_sf
InterPro:NiFe-Hase_large	PFAM:PF00346	PANTHER:PTHR11993	PANTHER:PTHR11993:SF10	SUPFAM:SSF56762	UniParc:UPI000B485DA4

Description

No Description!

Coordinates

chrchr3H:-:11957990..11960493

Molecular Weight (calculated)

21362.2 Da

IEP (calculated)

6.778

GRAVY (calculated)

-0.657

Length

189 amino acids

Sequence
(BLAST)

001: PSEKETPQPS QDKEWWAYPS QPGVCWDSRR AAPYDVHDQS DLDVPVGTRG DRYDRYCIRI EEMRQSVRII VQCPNQMPSG MIKADDRKLC PPSRSRMKLS
101: MESSIHHFEL YTEGFSVPAP STYTAVEAPK GEFGVFLVSN GSNRPYRCKI RAPGFAHSQG LDSMSKHHMP ADVVTIIGTQ DIVFGEVDR

Best Arabidopsis Sequence Match ( ATMG00510.1 )
(BLAST)

001: MTTRKRQIKN FTSNFGPQHP AAHGVSRLVL EMNGEVVERA EPHIGSLHRG TEKLIEYKTY LQALPYSDRS DYVSMMAQEH AHSSAVEKLL NCEVPLRAQY
101: IRVLFREITR ISNHSLALTT HAMDVGALTP FLWAFEEREK LLEFYERVSG ARMHASFIRP GGVAQDLPLG LCRDIDSFTQ QFASRIDELE EMSTGNRIWK
201: QRLVDIGTVT AQQAKDWGFS GVMLRGPGVC WDSRRAAPYD VHDQSDLDVP VGTRGDRYDR YCIRIEEMRQ SLRIIVQCLN QMPSGMIKAD DRKLCPPSRC
301: RMKLSMESSI HHFELYTEGF SVPASSTYTA VEAPKGEFGV FLVSNGSNRP YRRKIRAPGS AHSQGLDSMS KHHMPADVVT IIGTQDIVFG EVDR

Arabidopsis Description

NAD7Nad7 [Source:UniProtKB/TrEMBL;Acc:G1C2X4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.