Factsheet for HORVU4Hr1G027710.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g011410.1.1	Tomato	nucleus	28.57	82.19
TraesCS5D01G376800.1	Wheat	cytosol, mitochondrion, plastid	85.24	73.66
HORVU0Hr1G033540.1	Barley	cytosol	55.24	67.84
HORVU6Hr1G037410.1	Barley	extracellular	86.67	62.98
HORVU1Hr1G048080.1	Barley	cytosol	86.67	57.23
PGSC0003DMT400022652	Potato	mitochondrion	58.1	53.04
TraesCS1B01G405900.1	Wheat	cytosol	84.76	51.9
HORVU5Hr1G005410.1	Barley	cytosol, plastid	86.19	51.86
AGP50801	Barley	cytosol	86.67	49.19
HORVU0Hr1G024830.2	Barley	cytosol	86.67	46.31
HORVU0Hr1G036480.1	Barley	cytosol, mitochondrion, plastid	86.67	46.31
HORVU2Hr1G049060.1	Barley	cytosol	20.48	39.45
Solyc02g011810.1.1	Tomato	cytosol	9.52	35.71
VIT_10s0116g00060.t01	Wine grape	plasma membrane	55.24	26.3
HORVU3Hr1G075000.1	Barley	cytosol, mitochondrion	20.48	21.72
HORVU7Hr1G115900.1	Barley	cytosol	6.19	20.0
HORVU5Hr1G042630.1	Barley	cytosol	16.67	16.67
HORVU6Hr1G040930.1	Barley	cytosol, mitochondrion, nucleus	11.9	16.23
HORVU3Hr1G055090.1	Barley	cytosol	11.9	14.53
HORVU3Hr1G004810.3	Barley	cytosol	12.38	13.76
BAV58152	Barley	mitochondrion	23.33	12.44
HORVU2Hr1G015540.1	Barley	mitochondrion	23.33	12.13
HORVU0Hr1G037100.1	Barley	mitochondrion	23.33	12.13
HORVU0Hr1G033630.1	Barley	mitochondrion	23.33	12.13
HORVU4Hr1G059530.1	Barley	mitochondrion	11.9	10.46
HORVU6Hr1G039050.1	Barley	mitochondrion	4.29	7.14
HORVU1Hr1G065340.1	Barley	cytosol	7.62	6.48
HORVU5Hr1G093790.1	Barley	cytosol	0.95	5.88
Solyc07g032420.1.1	Tomato	cytosol	1.9	2.15
VIT_06s0004g07410.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.645.20	MapMan:35.1	UniProt:A0A287NN85	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016651	GO:GO:0048038	GO:GO:0051287
GO:GO:0055114	EnsemblPlantsGene:HORVU4Hr1G027710	EnsemblPlants:HORVU4Hr1G027710.1	InterPro:IPR038290	InterPro:NADH_Q_OxRdtase_suD	InterPro:NADH_Q_OxRdtase_suD_sf
InterPro:NiFe-Hase_large	PFAM:PF00346	PANTHER:PTHR11993	PANTHER:PTHR11993:SF27	SUPFAM:SSF56762	UniParc:UPI000B46775A

Description

No Description!

Coordinates

chrchr4H:-:169848876..169850119

Molecular Weight (calculated)

24832.6 Da

IEP (calculated)

5.434

GRAVY (calculated)

-0.539

Length

210 amino acids

Sequence
(BLAST)

001: MRMMHNYFRI GGVAADLPYG WIDKCLDFCD YFLHRIPEYQ QLITHNPIFL ERVEGVGFIS GEEAVNWVLS GPMLRASRIQ WDIRNVDPYE SYNQFDWQVQ
101: RQKEGDSLAR YLVRIGEMSE SIKIIQQAIE KILGGPYDNL EVRRFKKEKN SEWNDFEYKF LGKKPSPYFE LSRKELYVRV EGPKGELGIY LVGDDSLFSL
201: EKENPSTRFY

Best Arabidopsis Sequence Match ( ATCG01110.1 )
(BLAST)

001: MKRPVTGKDL MIVNMGPHHP SMHGVLRLIV TLDGEDVVDC EPILGYLHRG MEKIAENRAI IQYLPYVTRW DYLATMFTEA ITVNGPEQLG NIQVPKRASY
101: IRVIMLELSR IASHLLWLGP FMADIGAQTP FFYIFREREF VYDLFEAATG MRMMHNFFRI GGIAADLPYG WIDKCLDFCD YFLTEVVEYQ KLITRNPIFL
201: ERVEGVGIIG GEEAINWGLS GPMLRASGIP WDLRKIDRYE SYDEFEWEIQ WQKQGDSLAR YLVRLSEMTE SIKIIQQALE GLPGGPYENL ESRGFDRKRN
301: PEWNDFEYRF ISKKPSPTFE LSKQELYVRV EAPKGELGIF LIGDQSGFPW RWKIRPPGFI NLQILPELVK RMKLADIMTI LGSIDIIMGE VDR

Arabidopsis Description

NDHHNAD(P)H-quinone oxidoreductase subunit H, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P56753]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.