Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g022160.1.1 | Tomato | cytosol | 3.23 | 8.22 |
| Solyc01g011410.1.1 | Tomato | nucleus | 3.23 | 8.22 |
| Solyc10g047470.1.1 | Tomato | mitochondrion | 3.23 | 6.52 |
| Solyc10g052800.1.1 | Tomato | cytosol | 3.23 | 5.77 |
| Solyc01g065770.1.1 | Tomato | mitochondrion | 2.15 | 3.17 |
| Solyc01g017740.1.1 | Tomato | nucleus | 1.61 | 3.09 |
| PGSC0003DMT400022652 | Potato | mitochondrion | 3.76 | 3.04 |
| Solyc09g009360.1.1 | Tomato | cytosol, endoplasmic reticulum, nucleus, plastid | 2.69 | 2.78 |
| HORVU6Hr1G037410.1 | Barley | extracellular | 3.76 | 2.42 |
| HORVU1Hr1G048080.1 | Barley | cytosol | 3.76 | 2.2 |
| TraesCS5D01G376800.1 | Wheat | cytosol, mitochondrion, plastid | 2.69 | 2.06 |
| TraesCS1B01G405900.1 | Wheat | cytosol | 3.76 | 2.04 |
| HORVU5Hr1G005410.1 | Barley | cytosol, plastid | 3.76 | 2.01 |
| HORVU4Hr1G027710.1 | Barley | mitochondrion | 2.15 | 1.9 |
| TraesCSU01G237200.1 | Wheat | cytosol, mitochondrion, plastid | 3.76 | 1.79 |
| TraesCS1D01G184000.1 | Wheat | cytosol, mitochondrion, plastid | 3.76 | 1.79 |
| TraesCS2D01G243700.1 | Wheat | plastid | 3.76 | 1.78 |
| TraesCS7B01G080500.1 | Wheat | cytosol, mitochondrion, plastid | 3.76 | 1.78 |
| HORVU0Hr1G036480.1 | Barley | cytosol, mitochondrion, plastid | 3.76 | 1.78 |
| HORVU0Hr1G024830.2 | Barley | cytosol | 3.76 | 1.78 |
| GRMZM5G853723_P01 | Maize | plastid | 3.76 | 1.78 |
| CAA33911 | Rice | mitochondrion, plastid | 3.76 | 1.78 |
| AGP50801 | Barley | cytosol | 3.23 | 1.62 |
| Solyc12g035590.1.1 | Tomato | cytosol | 0.54 | 1.47 |
| VIT_06s0004g07410.t01 | Wine grape | cytosol | 0.0 | 0.0 |
| Solyc10g047460.1.1 | Tomato | cytosol | 0.0 | 0.0 |
| Solyc08g022170.1.1 | Tomato | plastid | 0.0 | 0.0 |
| Solyc07g042310.1.1 | Tomato | cytosol, mitochondrion, nucleus | 0.0 | 0.0 |
| Solyc02g011810.1.1 | Tomato | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.645.20 | MapMan:35.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016651 |
| GO:GO:0048038 | GO:GO:0051287 | GO:GO:0055114 | InterPro:IPR038290 | UniProt:K4CDI3 | InterPro:NADH_Q_OxRdtase_suD |
| InterPro:NADH_Q_OxRdtase_suD_sf | InterPro:NADH_UbQ_OxRdtase_su1/FPO | InterPro:NiFe-Hase_large | PFAM:PF00146 | PFAM:PF00346 | PANTHER:PTHR11993 |
| SUPFAM:SSF56762 | EnsemblPlantsGene:Solyc07g032420.1 | EnsemblPlants:Solyc07g032420.1.1 | TMHMM:TMhelix | UniParc:UPI000276B20E | : |
Description
No Description!
Coordinates
chr7:+:39109284..39110148
Molecular Weight (calculated)
21299.6 Da
IEP (calculated)
8.189
GRAVY (calculated)
0.347
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MHICKKPSPT FELTKQELYD IVEAPKGEFG IFPIGDQSVF PWRWKIRSPG FLNFQIVPQL VKRMKWADIR TVLGNRDITM EKLVVEMIIN TTELETITSF
101: SKLVCLKEVY GIIWMCVPIV TLVLGITICV LVIVLLEREI YSGIQQGYGP NNKYSFVGGL WEAPQSINYE TPLALCVLSI FVRLIR
101: SKLVCLKEVY GIIWMCVPIV TLVLGITICV LVIVLLEREI YSGIQQGYGP NNKYSFVGGL WEAPQSINYE TPLALCVLSI FVRLIR
1: SKYAFLGALR SAAQMVSYEV SIGLILITVL ICVGPRNSSE IVMAQKQIWS GIPLFPVLVM FLISRLAETN RAPFDLPEAE AESVAGYNVE Y
Arabidopsis Description
NAD1BNADH dehydrogenase 1B [Source:TAIR;Acc:ATMG01120]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.