Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G160900.1 | Wheat | cytosol | 15.49 | 9.65 |
| TraesCS1D01G258400.1 | Wheat | cytosol | 19.72 | 9.09 |
| TraesCS4D01G138800.1 | Wheat | cytosol | 19.72 | 9.09 |
| TraesCS7D01G075700.1 | Wheat | cytosol | 19.72 | 9.09 |
| TraesCS3D01G410700.1 | Wheat | mitochondrion | 19.72 | 4.36 |
| Solyc01g017740.1.1 | Tomato | nucleus | 5.63 | 4.12 |
| TraesCS6D01G139500.1 | Wheat | golgi, plastid, unclear | 18.31 | 3.22 |
| TraesCS5D01G376800.1 | Wheat | cytosol, mitochondrion, plastid | 7.04 | 2.06 |
| TraesCS1D01G184000.1 | Wheat | cytosol, mitochondrion, plastid | 9.86 | 1.79 |
| TraesCS2D01G243700.1 | Wheat | plastid | 9.86 | 1.78 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus | 4.23 | 1.05 |
| CAA33949 | Rice | cytosol | 0.0 | 0.0 |
| HORVU2Hr1G049060.1 | Barley | cytosol | 0.0 | 0.0 |
| KRH01226 | Soybean | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.287.10 | MapMan:17.7.2.2.15 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | HAMAP:MF_01343_B | PFAM:PD157043 |
| PFAM:PF00312 | ScanProsite:PS00362 | PANTHER:PTHR23321 | PANTHER:PTHR23321:SF30 | InterPro:Ribosomal_S15 | InterPro:Ribosomal_S15_bac-type |
| InterPro:S15_NS1_RNA-bd | SMART:SM01387 | SUPFAM:SSF47060 | TIGRFAMs:TIGR00952 | EnsemblPlantsGene:TraesCS3D01G177500 | EnsemblPlants:TraesCS3D01G177500.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr3D:-:158941970..158942206
Molecular Weight (calculated)
8560.6 Da
IEP (calculated)
11.637
GRAVY (calculated)
-0.894
Length
71 amino acids
Sequence
(BLAST)
(BLAST)
1: MVKEEKEENR GSVEFQVFSF TNKIRRLASH LELHKKDFSS ERGLRRLLGK RRRLLAYLAK KNRVRYKKLI G
1: MIKNIVISFE EQKEESRGSV EFQVFSFTNK IRRLTSHLEL HRKDYLSQRG LRKILGKRQR LLAYLSKKNR VRYKELINQL NIRELKTR
Arabidopsis Description
RPS1530S ribosomal protein S15, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P56805]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.