Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- cytosol 1
- peroxisome 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
extracellular:
20408568
plasma membrane: 23508561 mitochondrion: 27297264 plasma membrane: 27341663 mitochondrion: 29575040 |
msms PMID:
27297264
doi
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
msms PMID:
29575040
doi
Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GRMZM5G856027_P02 | Maize | cytosol, mitochondrion, peroxisome, plastid | 100.0 | 100.0 |
BAV58152 | Barley | mitochondrion | 99.49 | 99.49 |
Zm00001d040819_P001 | Maize | cytosol | 38.07 | 97.4 |
HORVU0Hr1G033630.1 | Barley | mitochondrion | 99.24 | 96.78 |
HORVU0Hr1G037100.1 | Barley | mitochondrion | 99.24 | 96.78 |
ATMG00510.1 | Thale cress | mitochondrion | 95.18 | 95.18 |
HORVU2Hr1G015540.1 | Barley | mitochondrion | 96.19 | 93.81 |
Solyc09g009360.1.1 | Tomato | cytosol, endoplasmic reticulum, nucleus, plastid | 40.86 | 89.44 |
KRH15676 | Soybean | mitochondrion | 39.59 | 79.19 |
Solyc07g042310.1.1 | Tomato | cytosol, mitochondrion, nucleus | 11.68 | 74.19 |
GRMZM5G853723_P01 | Maize | plastid | 31.73 | 31.81 |
CDY65733 | Canola | cytosol | 47.72 | 30.08 |
Protein Annotations
Gene3D:1.10.645.20 | MapMan:2.4.1.2.1 | EntrezGene:4055893 | ProteinID:AAR91198.1 | ProteinID:AQL04000.1 | GO:GO:0000166 |
GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
GO:GO:0005737 | GO:GO:0005739 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0016651 |
GO:GO:0048038 | GO:GO:0051287 | GO:GO:0055114 | InterPro:IPR038290 | HAMAP:MF_01358 | InterPro:NADH_Q_OxRdtase_suD |
InterPro:NADH_Q_OxRdtase_suD_sf | InterPro:NADH_UbQ_OxRdtase_49kDa_CS | InterPro:NDH1_su_D/H | InterPro:NiFe-Hase_large | PFAM:PF00346 | ScanProsite:PS00535 |
PANTHER:PTHR11993 | PANTHER:PTHR11993:SF10 | UniProt:Q6R9G1 | SUPFAM:SSF56762 | TIGRFAMs:TIGR01962 | UniParc:UPI0000233F21 |
EnsemblPlantsGene:Zm00001d046260 | EnsemblPlants:Zm00001d046260_P002 | EnsemblPlants:Zm00001d046260_T002 | : | : | : |
Description
NADH dehydrogenase subunit 7
Coordinates
chr9:+:77047294..77053291
Molecular Weight (calculated)
44282.6 Da
IEP (calculated)
7.215
GRAVY (calculated)
-0.432
Length
394 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTRNGQIKN FTSNSGPQHP AAHGVSRSVL EMNGEVVERA EPHIGSLHRG TEKLIEYKTY LQALPYFDRS DYVSTMAQEH AHSSAVERLL NCEVPLRAQY
101: IRVLFCEITR ISNHSLASTT HAMDVGASTP FLWAFEEREK LLEFYERVPG ARMHASFIRP GGVAQDLPLG LCRDIDSSTQ QFASRIDELE EMSTGNRIWK
201: QRLVDIGTVT AQQAKDWGFS GVMLRGPGVC WDSRRAAPYD VHDQSDLDVP VGTRGDRYDR YCIRIEEMRQ SVRIIVQCPN RMPSGMIKAD DRKLCPPSRS
301: RMKLSMESSI HHFELYTEGF SVPAPSTYTA VEAPKGEFGV FLVSNGSNRP YRCKIRAPGF AHSQGLDSMS KHHMPADVVT IIGTQDIVFG EVDR
101: IRVLFCEITR ISNHSLASTT HAMDVGASTP FLWAFEEREK LLEFYERVPG ARMHASFIRP GGVAQDLPLG LCRDIDSSTQ QFASRIDELE EMSTGNRIWK
201: QRLVDIGTVT AQQAKDWGFS GVMLRGPGVC WDSRRAAPYD VHDQSDLDVP VGTRGDRYDR YCIRIEEMRQ SVRIIVQCPN RMPSGMIKAD DRKLCPPSRS
301: RMKLSMESSI HHFELYTEGF SVPAPSTYTA VEAPKGEFGV FLVSNGSNRP YRCKIRAPGF AHSQGLDSMS KHHMPADVVT IIGTQDIVFG EVDR
001: MTTRKRQIKN FTSNFGPQHP AAHGVSRLVL EMNGEVVERA EPHIGSLHRG TEKLIEYKTY LQALPYSDRS DYVSMMAQEH AHSSAVEKLL NCEVPLRAQY
101: IRVLFREITR ISNHSLALTT HAMDVGALTP FLWAFEEREK LLEFYERVSG ARMHASFIRP GGVAQDLPLG LCRDIDSFTQ QFASRIDELE EMSTGNRIWK
201: QRLVDIGTVT AQQAKDWGFS GVMLRGPGVC WDSRRAAPYD VHDQSDLDVP VGTRGDRYDR YCIRIEEMRQ SLRIIVQCLN QMPSGMIKAD DRKLCPPSRC
301: RMKLSMESSI HHFELYTEGF SVPASSTYTA VEAPKGEFGV FLVSNGSNRP YRRKIRAPGS AHSQGLDSMS KHHMPADVVT IIGTQDIVFG EVDR
101: IRVLFREITR ISNHSLALTT HAMDVGALTP FLWAFEEREK LLEFYERVSG ARMHASFIRP GGVAQDLPLG LCRDIDSFTQ QFASRIDELE EMSTGNRIWK
201: QRLVDIGTVT AQQAKDWGFS GVMLRGPGVC WDSRRAAPYD VHDQSDLDVP VGTRGDRYDR YCIRIEEMRQ SLRIIVQCLN QMPSGMIKAD DRKLCPPSRC
301: RMKLSMESSI HHFELYTEGF SVPASSTYTA VEAPKGEFGV FLVSNGSNRP YRRKIRAPGS AHSQGLDSMS KHHMPADVVT IIGTQDIVFG EVDR
Arabidopsis Description
NAD7Nad7 [Source:UniProtKB/TrEMBL;Acc:G1C2X4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.