Factsheet for GRMZM5G856027_P02

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol

Predictor Summary:

plastid 2
mitochondrion 3
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046260_P002	Maize	mitochondrion	100.0	100.0
BAV58152	Barley	mitochondrion	99.49	99.49
Zm00001d040819_P001	Maize	cytosol	38.07	97.4
HORVU0Hr1G033630.1	Barley	mitochondrion	99.24	96.78
HORVU0Hr1G037100.1	Barley	mitochondrion	99.24	96.78
ATMG00510.1	Thale cress	mitochondrion	95.18	95.18
HORVU2Hr1G015540.1	Barley	mitochondrion	96.19	93.81
Solyc09g009360.1.1	Tomato	cytosol, endoplasmic reticulum, nucleus, plastid	40.86	89.44
KRH15676	Soybean	mitochondrion	39.59	79.19
Solyc07g042310.1.1	Tomato	cytosol, mitochondrion, nucleus	11.68	74.19
GRMZM5G853723_P01	Maize	plastid	31.73	31.81
CDY65733	Canola	cytosol	47.72	30.08

Protein Annotations

Gene3D:1.10.645.20	MapMan:2.4.1.2.1	EntrezGene:4055893	ProteinID:AAR91198.1	ProteinID:AQL04000.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016651
GO:GO:0048038	GO:GO:0051287	GO:GO:0055114	EnsemblPlantsGene:GRMZM5G856027	EnsemblPlants:GRMZM5G856027_P02	EnsemblPlants:GRMZM5G856027_T02
InterPro:IPR038290	HAMAP:MF_01358	InterPro:NADH_Q_OxRdtase_suD	InterPro:NADH_Q_OxRdtase_suD_sf	InterPro:NADH_UbQ_OxRdtase_49kDa_CS	InterPro:NDH1_su_D/H
InterPro:NiFe-Hase_large	PFAM:PF00346	ScanProsite:PS00535	PANTHER:PTHR11993	PANTHER:PTHR11993:SF10	UniProt:Q6R9G1
SUPFAM:SSF56762	TIGRFAMs:TIGR01962	UniParc:UPI0000233F21	:	:	:

Description

NADH dehydrogenase subunit 7 [Source:UniProtKB/TrEMBL;Acc:Q6R9G1]

Coordinates

chrMt:-:237577..243574

Molecular Weight (calculated)

44282.6 Da

IEP (calculated)

7.215

GRAVY (calculated)

-0.432

Length

394 amino acids

Sequence
(BLAST)

001: MTTRNGQIKN FTSNSGPQHP AAHGVSRSVL EMNGEVVERA EPHIGSLHRG TEKLIEYKTY LQALPYFDRS DYVSTMAQEH AHSSAVERLL NCEVPLRAQY
101: IRVLFCEITR ISNHSLASTT HAMDVGASTP FLWAFEEREK LLEFYERVPG ARMHASFIRP GGVAQDLPLG LCRDIDSSTQ QFASRIDELE EMSTGNRIWK
201: QRLVDIGTVT AQQAKDWGFS GVMLRGPGVC WDSRRAAPYD VHDQSDLDVP VGTRGDRYDR YCIRIEEMRQ SVRIIVQCPN RMPSGMIKAD DRKLCPPSRS
301: RMKLSMESSI HHFELYTEGF SVPAPSTYTA VEAPKGEFGV FLVSNGSNRP YRCKIRAPGF AHSQGLDSMS KHHMPADVVT IIGTQDIVFG EVDR

Best Arabidopsis Sequence Match ( ATMG00510.1 )
(BLAST)

001: MTTRKRQIKN FTSNFGPQHP AAHGVSRLVL EMNGEVVERA EPHIGSLHRG TEKLIEYKTY LQALPYSDRS DYVSMMAQEH AHSSAVEKLL NCEVPLRAQY
101: IRVLFREITR ISNHSLALTT HAMDVGALTP FLWAFEEREK LLEFYERVSG ARMHASFIRP GGVAQDLPLG LCRDIDSFTQ QFASRIDELE EMSTGNRIWK
201: QRLVDIGTVT AQQAKDWGFS GVMLRGPGVC WDSRRAAPYD VHDQSDLDVP VGTRGDRYDR YCIRIEEMRQ SLRIIVQCLN QMPSGMIKAD DRKLCPPSRC
301: RMKLSMESSI HHFELYTEGF SVPASSTYTA VEAPKGEFGV FLVSNGSNRP YRRKIRAPGS AHSQGLDSMS KHHMPADVVT IIGTQDIVFG EVDR

Arabidopsis Description

NAD7Nad7 [Source:UniProtKB/TrEMBL;Acc:G1C2X4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.