Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG20781 | Sorghum | cytosol | 95.23 | 95.34 |
| HORVU2Hr1G083840.8 | Barley | cytosol | 53.95 | 88.72 |
| TraesCS2D01G341700.1 | Wheat | cytosol | 85.12 | 85.12 |
| TraesCS2B01G361700.1 | Wheat | cytosol | 85.0 | 85.0 |
| TraesCS2A01G321000.1 | Wheat | cytosol | 85.0 | 85.0 |
| Os04t0484800-01 | Rice | cytosol | 84.77 | 84.38 |
| HORVU0Hr1G004870.2 | Barley | cytosol | 22.33 | 82.4 |
| HORVU0Hr1G004980.2 | Barley | cytosol | 30.7 | 76.97 |
| HORVU0Hr1G004910.1 | Barley | cytosol | 10.93 | 75.81 |
| KRH32716 | Soybean | golgi | 23.95 | 72.03 |
| GSMUA_Achr3P19380_001 | Banana | cytosol | 69.88 | 68.69 |
| VIT_01s0026g02730.t01 | Wine grape | cytosol | 68.37 | 66.59 |
| KRH30995 | Soybean | cytosol | 64.88 | 63.12 |
| KRG97883 | Soybean | cytosol | 64.88 | 63.05 |
| AT2G04660.1 | Thale cress | cytosol | 62.91 | 62.54 |
| PGSC0003DMT400047444 | Potato | cytosol | 63.49 | 61.76 |
| Solyc05g007750.2.1 | Tomato | cytosol | 63.14 | 61.49 |
| CDY04835 | Canola | cytosol | 60.58 | 61.08 |
| Bra028905.1-P | Field mustard | cytosol | 60.7 | 60.98 |
| Bra025616.1-P | Field mustard | cytosol | 58.6 | 60.5 |
| CDY30292 | Canola | cytosol | 59.53 | 60.45 |
| CDY30835 | Canola | cytosol | 58.72 | 60.26 |
| KRH74904 | Soybean | cytosol, extracellular, peroxisome | 4.88 | 39.25 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:1.10.10.2620 | Gene3D:1.20.1310.10 | EntrezGene:103626410 | MapMan:13.3.4.1.1.3.1 | UniProt:A0A1D6GVA1 |
| InterPro:APC_su2_C | ProteinID:AQK66841.1 | InterPro:Cullin_N | InterPro:Cullin_homology | InterPro:Cullin_homology_sf | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005819 | GO:GO:0005856 | GO:GO:0006511 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009561 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0031625 | InterPro:IPR016158 |
| InterPro:IPR036388 | PFAM:PF00888 | PFAM:PF08672 | PFscan:PS50069 | PANTHER:PTHR11932 | PANTHER:PTHR11932:SF5 |
| SMART:SM00182 | SMART:SM01013 | SUPFAM:SSF46785 | SUPFAM:SSF75632 | UniParc:UPI000221060A | InterPro:WH-like_DNA-bd_sf |
| InterPro:WH_DNA-bd_sf | EnsemblPlantsGene:Zm00001d014685 | EnsemblPlants:Zm00001d014685_P009 | EnsemblPlants:Zm00001d014685_T009 | SEG:seg | : |
Description
Anaphase-promoting complex subunit 2
Coordinates
chr5:+:58999624..59015973
Molecular Weight (calculated)
96933.5 Da
IEP (calculated)
4.875
GRAVY (calculated)
-0.277
Length
860 amino acids
Sequence
(BLAST)
(BLAST)
001: MEREDADGAL DSWAQFCTLS NELLAGDGDL AVGPRLAPVV GDLCTRGLAT LVRDYFLHSL EETFRNHAVK KFWQHFHPYC SASTVDRIKF CVKEHWPEEI
101: LSKALEDICL ERGYQEKCVL VLVQVLQSYE DRMPRKKIKE VVCSSSLMPR YQLMVSSVLL TTLPLSFPDI LNIYFKKKLE ELNSIMAGSY ESDQLVDHEP
201: FQRSNTSDWH SGMDIDGSEV SENSSLVKNI GKVVRDLRCI GFTSMTEDAY SSAIIWLLKS KVYELAGDDY RVSVLWCVKK WIQAVPLQFL HALLTYLGDS
301: VDHGSGSSGL KSPLASRPSS FPGIGVPSEA LVRWHMRLEY FAYETLQDLR IGKLFEIIVD YPESSPAIED LKLCLEYTGQ HSKLVDSFIS SLRYRLLTAG
401: ASTNDILHQY VSTIKALRTI DPTGVFLEAV GEPIRDYLRG RKDTIKCIVT MLTDGSGGSG SGTGNAGDNL LEELNRDAEN QENADYDDHA NIDEKQAWLN
501: SESWEPDPVE ADPLKGNRNR RKVDILGLMV SIIGSKDQLV NEYRVMLAEK LLNKSDFEID SDIRTLELLK IHFGESSMQK CEIMLNDLID SKRTNSNIKT
601: SLLKSSQTVP GQEEAEVSHD VLDATIISSN FWPPIQIEDL VVPASVDQLL SDYAKRFHQI KTPRKLLWKK NLGTVKLELQ FDGRSVQFTV APVHAAIIMR
701: FQEKSSWTSK ALATEIGIPM DSLNRRISFW TSKGVLTESA GPDADDRTFT VVDSMSDVNK DSIVNERMAE YQMTEEEGES SVASVEEQLK KEMTVYEKYI
801: VGMLTNFGSM SLDRIHNTLK MFCIAEPSYD KSLQQLQSFL SGLVADEKLE TRDGLYLLKR
101: LSKALEDICL ERGYQEKCVL VLVQVLQSYE DRMPRKKIKE VVCSSSLMPR YQLMVSSVLL TTLPLSFPDI LNIYFKKKLE ELNSIMAGSY ESDQLVDHEP
201: FQRSNTSDWH SGMDIDGSEV SENSSLVKNI GKVVRDLRCI GFTSMTEDAY SSAIIWLLKS KVYELAGDDY RVSVLWCVKK WIQAVPLQFL HALLTYLGDS
301: VDHGSGSSGL KSPLASRPSS FPGIGVPSEA LVRWHMRLEY FAYETLQDLR IGKLFEIIVD YPESSPAIED LKLCLEYTGQ HSKLVDSFIS SLRYRLLTAG
401: ASTNDILHQY VSTIKALRTI DPTGVFLEAV GEPIRDYLRG RKDTIKCIVT MLTDGSGGSG SGTGNAGDNL LEELNRDAEN QENADYDDHA NIDEKQAWLN
501: SESWEPDPVE ADPLKGNRNR RKVDILGLMV SIIGSKDQLV NEYRVMLAEK LLNKSDFEID SDIRTLELLK IHFGESSMQK CEIMLNDLID SKRTNSNIKT
601: SLLKSSQTVP GQEEAEVSHD VLDATIISSN FWPPIQIEDL VVPASVDQLL SDYAKRFHQI KTPRKLLWKK NLGTVKLELQ FDGRSVQFTV APVHAAIIMR
701: FQEKSSWTSK ALATEIGIPM DSLNRRISFW TSKGVLTESA GPDADDRTFT VVDSMSDVNK DSIVNERMAE YQMTEEEGES SVASVEEQLK KEMTVYEKYI
801: VGMLTNFGSM SLDRIHNTLK MFCIAEPSYD KSLQQLQSFL SGLVADEKLE TRDGLYLLKR
001: MEALGSSDCN LEILETLSDD AIQEITESYD GFFTTVESLI AGTGDSLVED EFVSHVYCLC KYGLDSLVRD HFLRSLEQAF EKGGASSFWQ HFDAYSEKKH
101: HNYGEEIQIV LCKALEEISI EKQYHEKCLS IVVHALQSFK EQSSDDRQNS DTERVHLFSR FQSMLSSTLM TTLPQHFPEI LHWYFKERLE ELSAIMDGDG
201: IEEQEDDCMD LDEKLRYKNG EMDVDEGCSQ GKRLGHDKLV KNIGKVVRDL RSIGFTSMAE NAYASAIFLL LKAKVHDLAG DDYRTSVLES IKEWIQTVPL
301: QFLNALLSYL GDSVSYGTTS SGLTSPLACC PSPSFSRVVT PSEGIVRWKL RLEYFAYETL QDLRIAKLFE IIVDYPESSP AIEDLKQCLE YTGQHSKLVE
401: SFISSLKYRL LTAGASTNDI LHQYVSTIKA LRAIDPAGVF LEAVGEPIRD YLRGRKDTIK CIVTMLTDGS GGNANGSGNP GDSLLEELMR DEESQENVGF
501: DDDFHTDDKQ AWINASRWEP DPVEADPLKG SLSQRKVDIL GMLVDIIGSK EQLVNEYRVM LAEKLLNKTD YDIDTEIRTV ELLKIHFGEA SMQRCEIMLN
601: DLIDSKRVNT NIKKASQTGA ELRENELSVD TLTSTILSTN FWPPIQDEPL ELPGPVDKLL SDYANRYHEI KTPRKLLWKK NLGTVKLELQ FEDRAMQFTV
701: SPTHAAIIMQ FQEKKSWTYK DLAEVIGIPI DALNRRVNFW ISKGVLREST GANSNSSVLT LVESITDSGK NEGEELLTGE EEGETSIASV EDQLRKEMTI
801: YEKFIMGMLT NFGSMALERI HNTLKMFCVA DPSYDKSLQQ LQSFLSGLVS EEKLEFRDGM YLLKK
101: HNYGEEIQIV LCKALEEISI EKQYHEKCLS IVVHALQSFK EQSSDDRQNS DTERVHLFSR FQSMLSSTLM TTLPQHFPEI LHWYFKERLE ELSAIMDGDG
201: IEEQEDDCMD LDEKLRYKNG EMDVDEGCSQ GKRLGHDKLV KNIGKVVRDL RSIGFTSMAE NAYASAIFLL LKAKVHDLAG DDYRTSVLES IKEWIQTVPL
301: QFLNALLSYL GDSVSYGTTS SGLTSPLACC PSPSFSRVVT PSEGIVRWKL RLEYFAYETL QDLRIAKLFE IIVDYPESSP AIEDLKQCLE YTGQHSKLVE
401: SFISSLKYRL LTAGASTNDI LHQYVSTIKA LRAIDPAGVF LEAVGEPIRD YLRGRKDTIK CIVTMLTDGS GGNANGSGNP GDSLLEELMR DEESQENVGF
501: DDDFHTDDKQ AWINASRWEP DPVEADPLKG SLSQRKVDIL GMLVDIIGSK EQLVNEYRVM LAEKLLNKTD YDIDTEIRTV ELLKIHFGEA SMQRCEIMLN
601: DLIDSKRVNT NIKKASQTGA ELRENELSVD TLTSTILSTN FWPPIQDEPL ELPGPVDKLL SDYANRYHEI KTPRKLLWKK NLGTVKLELQ FEDRAMQFTV
701: SPTHAAIIMQ FQEKKSWTYK DLAEVIGIPI DALNRRVNFW ISKGVLREST GANSNSSVLT LVESITDSGK NEGEELLTGE EEGETSIASV EDQLRKEMTI
801: YEKFIMGMLT NFGSMALERI HNTLKMFCVA DPSYDKSLQQ LQSFLSGLVS EEKLEFRDGM YLLKK
Arabidopsis Description
APC2APC2 [Source:UniProtKB/TrEMBL;Acc:A0A178VYA9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.