Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G083840.8 | Barley | cytosol | 91.42 | 40.73 |
| HORVU0Hr1G004980.2 | Barley | cytosol | 48.07 | 32.65 |
| TraesCS2D01G341700.1 | Wheat | cytosol | 90.99 | 24.65 |
| TraesCS2A01G321000.1 | Wheat | cytosol | 90.99 | 24.65 |
| TraesCS2B01G361700.1 | Wheat | cytosol | 90.56 | 24.53 |
| KXG20781 | Sorghum | cytosol | 83.69 | 22.7 |
| Zm00001d014685_P009 | Maize | cytosol | 82.4 | 22.33 |
| Os04t0484800-01 | Rice | cytosol | 80.26 | 21.64 |
| GSMUA_Achr3P19380_001 | Banana | cytosol | 69.53 | 18.51 |
| VIT_01s0026g02730.t01 | Wine grape | cytosol | 68.67 | 18.12 |
| Bra025616.1-P | Field mustard | cytosol | 63.95 | 17.89 |
| AT2G04660.1 | Thale cress | cytosol | 66.09 | 17.8 |
| CDY30835 | Canola | cytosol | 63.95 | 17.78 |
| CDY30292 | Canola | cytosol | 64.38 | 17.71 |
| KRH30995 | Soybean | cytosol | 66.09 | 17.42 |
| KRG97883 | Soybean | cytosol | 66.09 | 17.4 |
| Bra028905.1-P | Field mustard | cytosol | 63.52 | 17.29 |
| CDY04835 | Canola | cytosol | 61.8 | 16.88 |
| PGSC0003DMT400047444 | Potato | cytosol | 63.52 | 16.74 |
| Solyc05g007750.2.1 | Tomato | cytosol | 63.09 | 16.65 |
| KRH74904 | Soybean | cytosol, extracellular, peroxisome | 3.43 | 7.48 |
| KRH32716 | Soybean | golgi | 0.0 | 0.0 |
| HORVU0Hr1G004910.1 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.10.2620 | Gene3D:1.20.1310.10 | MapMan:13.3.4.1.1.3.1 | UniProt:A0A287DVW3 | InterPro:Cullin_N | InterPro:Cullin_homology |
| InterPro:Cullin_homology_sf | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006511 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0031625 | EnsemblPlantsGene:HORVU0Hr1G004870 |
| EnsemblPlants:HORVU0Hr1G004870.2 | InterPro:IPR016158 | PFAM:PF00888 | PFscan:PS50069 | PANTHER:PTHR11932 | PANTHER:PTHR11932:SF5 |
| SMART:SM00182 | SUPFAM:SSF75632 | UniParc:UPI000B4784F1 | : | : | : |
Description
No Description!
Coordinates
chrchrUn:+:28019124..28027332
Molecular Weight (calculated)
26167.6 Da
IEP (calculated)
7.079
GRAVY (calculated)
-0.277
Length
233 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSIIGSKDQ LVNEYRVMLA EKLLSKSDFD IDSDIRTLEL LKIHFGESSM QKCEIMLNDL IDSKRTNSNI KTSLLNAPGT VAGQEEAEIS HDVLDATIIS
101: SNFWPPIQTE DLAVPASVDK LLSDFAQRFH QIKTPRKLLW KKNLGTVKLE LQFEDRSMQF TVVPVHAAII MRFQEKPSWT SKALATEIGI PVDSLNRRIG
201: FWTSKSKEIK KQVDATEAIL DKTHGGKKGE SAL
101: SNFWPPIQTE DLAVPASVDK LLSDFAQRFH QIKTPRKLLW KKNLGTVKLE LQFEDRSMQF TVVPVHAAII MRFQEKPSWT SKALATEIGI PVDSLNRRIG
201: FWTSKSKEIK KQVDATEAIL DKTHGGKKGE SAL
001: MEALGSSDCN LEILETLSDD AIQEITESYD GFFTTVESLI AGTGDSLVED EFVSHVYCLC KYGLDSLVRD HFLRSLEQAF EKGGASSFWQ HFDAYSEKKH
101: HNYGEEIQIV LCKALEEISI EKQYHEKCLS IVVHALQSFK EQSSDDRQNS DTERVHLFSR FQSMLSSTLM TTLPQHFPEI LHWYFKERLE ELSAIMDGDG
201: IEEQEDDCMD LDEKLRYKNG EMDVDEGCSQ GKRLGHDKLV KNIGKVVRDL RSIGFTSMAE NAYASAIFLL LKAKVHDLAG DDYRTSVLES IKEWIQTVPL
301: QFLNALLSYL GDSVSYGTTS SGLTSPLACC PSPSFSRVVT PSEGIVRWKL RLEYFAYETL QDLRIAKLFE IIVDYPESSP AIEDLKQCLE YTGQHSKLVE
401: SFISSLKYRL LTAGASTNDI LHQYVSTIKA LRAIDPAGVF LEAVGEPIRD YLRGRKDTIK CIVTMLTDGS GGNANGSGNP GDSLLEELMR DEESQENVGF
501: DDDFHTDDKQ AWINASRWEP DPVEADPLKG SLSQRKVDIL GMLVDIIGSK EQLVNEYRVM LAEKLLNKTD YDIDTEIRTV ELLKIHFGEA SMQRCEIMLN
601: DLIDSKRVNT NIKKASQTGA ELRENELSVD TLTSTILSTN FWPPIQDEPL ELPGPVDKLL SDYANRYHEI KTPRKLLWKK NLGTVKLELQ FEDRAMQFTV
701: SPTHAAIIMQ FQEKKSWTYK DLAEVIGIPI DALNRRVNFW ISKGVLREST GANSNSSVLT LVESITDSGK NEGEELLTGE EEGETSIASV EDQLRKEMTI
801: YEKFIMGMLT NFGSMALERI HNTLKMFCVA DPSYDKSLQQ LQSFLSGLVS EEKLEFRDGM YLLKK
101: HNYGEEIQIV LCKALEEISI EKQYHEKCLS IVVHALQSFK EQSSDDRQNS DTERVHLFSR FQSMLSSTLM TTLPQHFPEI LHWYFKERLE ELSAIMDGDG
201: IEEQEDDCMD LDEKLRYKNG EMDVDEGCSQ GKRLGHDKLV KNIGKVVRDL RSIGFTSMAE NAYASAIFLL LKAKVHDLAG DDYRTSVLES IKEWIQTVPL
301: QFLNALLSYL GDSVSYGTTS SGLTSPLACC PSPSFSRVVT PSEGIVRWKL RLEYFAYETL QDLRIAKLFE IIVDYPESSP AIEDLKQCLE YTGQHSKLVE
401: SFISSLKYRL LTAGASTNDI LHQYVSTIKA LRAIDPAGVF LEAVGEPIRD YLRGRKDTIK CIVTMLTDGS GGNANGSGNP GDSLLEELMR DEESQENVGF
501: DDDFHTDDKQ AWINASRWEP DPVEADPLKG SLSQRKVDIL GMLVDIIGSK EQLVNEYRVM LAEKLLNKTD YDIDTEIRTV ELLKIHFGEA SMQRCEIMLN
601: DLIDSKRVNT NIKKASQTGA ELRENELSVD TLTSTILSTN FWPPIQDEPL ELPGPVDKLL SDYANRYHEI KTPRKLLWKK NLGTVKLELQ FEDRAMQFTV
701: SPTHAAIIMQ FQEKKSWTYK DLAEVIGIPI DALNRRVNFW ISKGVLREST GANSNSSVLT LVESITDSGK NEGEELLTGE EEGETSIASV EDQLRKEMTI
801: YEKFIMGMLT NFGSMALERI HNTLKMFCVA DPSYDKSLQQ LQSFLSGLVS EEKLEFRDGM YLLKK
Arabidopsis Description
APC2APC2 [Source:UniProtKB/TrEMBL;Acc:A0A178VYA9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.