CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 3
golgi 2
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG95339
KRH11210
KRH14509
KRH15676
KRH21040
KRH24006
KRH26168
KRH27971
KRH29310
KRH41728
KRH44668
KRH46990
KRH49954
KRH55075
KRH67023
KRH73622
KRH77487

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G04660.1	KRH14509	AT1G06590.1	20706207
AT2G04660.1	KRH73622	AT1G06590.1	20706207
AT2G04660.1	KRH26168	AT1G78770.1	20706207
AT2G04660.1	KRH55075	AT1G78770.1	20706207
AT2G04660.1	KRH41728	AT2G20000.1	17944809
AT2G04660.1	KRH41728	AT2G20000.1	20706207
AT2G04660.1	KRH11210	AT2G39090.1	20706207
AT2G04660.1	KRH21040	AT2G39090.1	20706207
AT2G04660.1	KRG95339	AT2G42260.1	20706207
AT2G04660.1	KRH67023	AT2G42260.1	20706207
AT2G04660.1	KRH24006	AT3G48150.1	14508008
AT2G04660.1	KRH27971	AT3G48150.1	14508008
AT2G04660.1	KRH29310	AT3G48150.1	14508008
AT2G04660.1	KRH77487	AT3G48150.1	14508008
AT2G04660.1	KRH24006	AT3G48150.1	20706207
AT2G04660.1	KRH27971	AT3G48150.1	20706207
AT2G04660.1	KRH29310	AT3G48150.1	20706207
AT2G04660.1	KRH77487	AT3G48150.1	20706207
AT2G04660.1	KRG95339	AT3G57860.1	20706207
AT2G04660.1	KRH67023	AT3G57860.1	20706207
AT2G04660.1	KRH49954	AT4G21530.1	20706207
AT2G04660.1	KRH44668	AT5G19990.1	20706207
AT2G04660.1	KRH46990	AT5G19990.1	20706207
AT2G04660.1	KRH15676	ATMG00510.1	20706207

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30995	Soybean	cytosol	91.61	29.64
KRG97883	Soybean	cytosol	89.86	29.04
HORVU0Hr1G004980.2	Barley	cytosol	32.17	26.82
VIT_01s0026g02730.t01	Wine grape	cytosol	78.32	25.37
AT2G04660.1	Thale cress	cytosol	74.48	24.62
CDY04835	Canola	cytosol	72.38	24.27
Bra028905.1-P	Field mustard	cytosol	72.03	24.07
Zm00001d014685_P009	Maize	cytosol	72.03	23.95
GSMUA_Achr3P19380_001	Banana	cytosol	72.73	23.77
KXG20781	Sorghum	cytosol	70.98	23.63
TraesCS2A01G321000.1	Wheat	cytosol	70.63	23.49
TraesCS2B01G361700.1	Wheat	cytosol	70.28	23.37
TraesCS2D01G341700.1	Wheat	cytosol	70.28	23.37
Bra025616.1-P	Field mustard	cytosol	67.83	23.29
PGSC0003DMT400047444	Potato	cytosol	71.68	23.19
CDY30835	Canola	cytosol	67.83	23.15
CDY30292	Canola	cytosol	68.53	23.14
Solyc05g007750.2.1	Tomato	cytosol	71.33	23.1
Os04t0484800-01	Rice	cytosol	69.58	23.03
HORVU2Hr1G083840.8	Barley	cytosol	41.26	22.56
HORVU0Hr1G004910.1	Barley	cytosol	1.05	2.42
HORVU0Hr1G004870.2	Barley	cytosol	0.0	0.0
KRH74904	Soybean	cytosol, extracellular, peroxisome	0.0	0.0

Protein Annotations

MapMan:13.3.4.1.1.3.1	EMBL:ACUP02006152	EnsemblPlantsGene:GLYMA_10G070000	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005680
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016567
GO:GO:0016740	GO:GO:0019538	GO:GO:0031625	GO:GO:0042787	GO:GO:0061630	UniProt:K7LHV6
EnsemblPlants:KRH32716	ProteinID:KRH32716	ProteinID:KRH32716.1	PANTHER:PTHR11932	PANTHER:PTHR11932:SF5	UniParc:UPI000296677B

Description

hypothetical protein

Coordinates

chr10:+:6905775..6908561

Molecular Weight (calculated)

31740.2 Da

IEP (calculated)

7.097

GRAVY (calculated)

0.001

Length

286 amino acids

Sequence
(BLAST)

001: MSLRIRGGIV VIFKKVYYNV DECYSDHRFS ENSRLVKNIG KVVLDLRNLG FTSMAEDAYS SAIFLLLKAK VHDVAGDDFQ SSVLQSIKSW IQVVPLQFLH
101: ALLVYLGDVV SYESTSSGLK SPLAPQPSSC CPGIDTPSEG LVRWKLRLEY FAYETLQDLR IAKLFEIIVD YPESSPAIED LKLCLEYTGQ HSKLVESFIS
201: ALRYRLLTAG ASTNDILHQY VSTIKALRTI DPAGVFLEAV GEPIRDYLRG RRDTIKCIVT MMTDGTGAHS SSSGNPGDNA ISRISK

Best Arabidopsis Sequence Match ( AT2G04660.1 )
(BLAST)

001: MEALGSSDCN LEILETLSDD AIQEITESYD GFFTTVESLI AGTGDSLVED EFVSHVYCLC KYGLDSLVRD HFLRSLEQAF EKGGASSFWQ HFDAYSEKKH
101: HNYGEEIQIV LCKALEEISI EKQYHEKCLS IVVHALQSFK EQSSDDRQNS DTERVHLFSR FQSMLSSTLM TTLPQHFPEI LHWYFKERLE ELSAIMDGDG
201: IEEQEDDCMD LDEKLRYKNG EMDVDEGCSQ GKRLGHDKLV KNIGKVVRDL RSIGFTSMAE NAYASAIFLL LKAKVHDLAG DDYRTSVLES IKEWIQTVPL
301: QFLNALLSYL GDSVSYGTTS SGLTSPLACC PSPSFSRVVT PSEGIVRWKL RLEYFAYETL QDLRIAKLFE IIVDYPESSP AIEDLKQCLE YTGQHSKLVE
401: SFISSLKYRL LTAGASTNDI LHQYVSTIKA LRAIDPAGVF LEAVGEPIRD YLRGRKDTIK CIVTMLTDGS GGNANGSGNP GDSLLEELMR DEESQENVGF
501: DDDFHTDDKQ AWINASRWEP DPVEADPLKG SLSQRKVDIL GMLVDIIGSK EQLVNEYRVM LAEKLLNKTD YDIDTEIRTV ELLKIHFGEA SMQRCEIMLN
601: DLIDSKRVNT NIKKASQTGA ELRENELSVD TLTSTILSTN FWPPIQDEPL ELPGPVDKLL SDYANRYHEI KTPRKLLWKK NLGTVKLELQ FEDRAMQFTV
701: SPTHAAIIMQ FQEKKSWTYK DLAEVIGIPI DALNRRVNFW ISKGVLREST GANSNSSVLT LVESITDSGK NEGEELLTGE EEGETSIASV EDQLRKEMTI
801: YEKFIMGMLT NFGSMALERI HNTLKMFCVA DPSYDKSLQQ LQSFLSGLVS EEKLEFRDGM YLLKK

Arabidopsis Description

APC2APC2 [Source:UniProtKB/TrEMBL;Acc:A0A178VYA9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.