Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400047444 | Potato | cytosol | 98.19 | 98.08 |
| VIT_01s0026g02730.t01 | Wine grape | cytosol | 74.63 | 74.63 |
| HORVU2Hr1G083840.8 | Barley | cytosol | 42.81 | 72.28 |
| KRH32716 | Soybean | golgi | 23.1 | 71.33 |
| KRG97883 | Soybean | cytosol | 70.89 | 70.73 |
| KRH30995 | Soybean | cytosol | 70.33 | 70.25 |
| AT2G04660.1 | Thale cress | cytosol | 67.95 | 69.36 |
| GSMUA_Achr3P19380_001 | Banana | cytosol | 66.7 | 67.31 |
| Bra028905.1-P | Field mustard | cytosol | 65.23 | 67.29 |
| CDY04835 | Canola | cytosol | 64.78 | 67.06 |
| HORVU0Hr1G004980.2 | Barley | cytosol | 25.37 | 65.31 |
| CDY30292 | Canola | cytosol | 62.29 | 64.94 |
| Bra025616.1-P | Field mustard | cytosol | 60.93 | 64.59 |
| CDY30835 | Canola | cytosol | 61.04 | 64.32 |
| Os04t0484800-01 | Rice | cytosol | 62.4 | 63.77 |
| KXG20781 | Sorghum | cytosol | 61.95 | 63.68 |
| TraesCS2A01G321000.1 | Wheat | cytosol | 61.49 | 63.14 |
| Zm00001d014685_P009 | Maize | cytosol | 61.49 | 63.14 |
| HORVU0Hr1G004870.2 | Barley | cytosol | 16.65 | 63.09 |
| TraesCS2D01G341700.1 | Wheat | cytosol | 61.38 | 63.02 |
| TraesCS2B01G361700.1 | Wheat | cytosol | 61.16 | 62.79 |
| KRH74904 | Soybean | cytosol, extracellular, peroxisome | 5.55 | 45.79 |
| HORVU0Hr1G004910.1 | Barley | cytosol | 5.66 | 40.32 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:1.10.10.2620 | Gene3D:1.20.1310.10 | MapMan:13.3.4.1.1.3.1 | InterPro:APC_su2_C | InterPro:Cullin_N |
| InterPro:Cullin_homology | InterPro:Cullin_homology_sf | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005680 | GO:GO:0005819 |
| GO:GO:0005856 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009561 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 |
| GO:GO:0031625 | GO:GO:0042787 | GO:GO:0061630 | InterPro:IPR016158 | InterPro:IPR036388 | UniProt:K4BWV0 |
| PFAM:PF00888 | PFAM:PF08672 | PFscan:PS50069 | PANTHER:PTHR11932 | PANTHER:PTHR11932:SF5 | SMART:SM00182 |
| SMART:SM01013 | SUPFAM:SSF46785 | SUPFAM:SSF75632 | EnsemblPlantsGene:Solyc05g007750.2 | EnsemblPlants:Solyc05g007750.2.1 | UniParc:UPI0002765EB1 |
| InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg | : | : | : |
Description
Anaphase-promoting complex subunit 2 [Source:Projected from Arabidopsis thaliana (AT2G04660) UniProtKB/Swiss-Prot;Acc:Q8H1U5]
Coordinates
chr5:+:2213544..2221713
Molecular Weight (calculated)
99454.1 Da
IEP (calculated)
4.620
GRAVY (calculated)
-0.360
Length
883 amino acids
Sequence
(BLAST)
(BLAST)
001: MTCDTSSSGC GLEKLESLSD DSITVISENW NGFCSSSEAL LKGSGDLSFS DEFVMRAKNL CKHGLSSLVE QHFLRCIEEI FERNGAKRFW SYFEPYRNAA
101: PSETNKDLIL EEEIQQIICK ALEEISSQKQ FQEKCLLLLA RALQSYEEDK LQGQANPDST RVYLLSKYQL IVSSVLLASL PHHFPGILHW YFKGRLEELS
201: TIAAANSEDE EELGMDDKMD LDEKSKLPYK CGDMDSDISH KYAVFSENNK LVKNIGMVVR NLRNIGFTSM AEDAYASAIF FLLKDKVHDL AGDDYRSSVL
301: ESIKAWIQAV PLQFLRALLD YLGDFTNCND PSPGLKSPLA SHPSCYSGTG IPSEGLVRWQ LRLEYYAYET LQDLRIAKLF EIIVDYPDSA PAIEDLKQCL
401: EYTGQHSKLV DSFISSLRYR LLTAGASTND ILHQYVSTIK ALRTIDPAGV FLEAVGEPIR EYLRGRKDTI KCIVTMLTDG TGGNPNGPGG SGDSLLEELN
501: RDEESQENTT IDDDINSDDK QAWINAQNWE PDPVEADPSK GSRYRRKVDI LGMIVGIIGS KDQLVNEYRV MLAEKLLNKS DYDIDAEIRT LELLKIHFGE
601: SSMQKCEIML NDLIDSKRTN TNIKATIKHQ PQPEQKDLDI SLDNVNATII SSNFWPPIQD EAINLPEPVE QLLTDYAKRY TEVKTPRKLI WKKNLGSVKL
701: ELQFEDRAMQ FNVTPLHASI IMQFQDQKKW ISKNLAAAVG VPVDVLNRRI NFWISKGILA ESMGADSADH AFTLVETMND TGKSGTIDGG CEELLAGEDD
801: GERSVASVED QLRKEMTVYE KFITGMLTNF GSMALDRIHN TLKMFCIADP TYDKSLQQLQ SFLSGLVAEE KLEFRDGMYF LKK
101: PSETNKDLIL EEEIQQIICK ALEEISSQKQ FQEKCLLLLA RALQSYEEDK LQGQANPDST RVYLLSKYQL IVSSVLLASL PHHFPGILHW YFKGRLEELS
201: TIAAANSEDE EELGMDDKMD LDEKSKLPYK CGDMDSDISH KYAVFSENNK LVKNIGMVVR NLRNIGFTSM AEDAYASAIF FLLKDKVHDL AGDDYRSSVL
301: ESIKAWIQAV PLQFLRALLD YLGDFTNCND PSPGLKSPLA SHPSCYSGTG IPSEGLVRWQ LRLEYYAYET LQDLRIAKLF EIIVDYPDSA PAIEDLKQCL
401: EYTGQHSKLV DSFISSLRYR LLTAGASTND ILHQYVSTIK ALRTIDPAGV FLEAVGEPIR EYLRGRKDTI KCIVTMLTDG TGGNPNGPGG SGDSLLEELN
501: RDEESQENTT IDDDINSDDK QAWINAQNWE PDPVEADPSK GSRYRRKVDI LGMIVGIIGS KDQLVNEYRV MLAEKLLNKS DYDIDAEIRT LELLKIHFGE
601: SSMQKCEIML NDLIDSKRTN TNIKATIKHQ PQPEQKDLDI SLDNVNATII SSNFWPPIQD EAINLPEPVE QLLTDYAKRY TEVKTPRKLI WKKNLGSVKL
701: ELQFEDRAMQ FNVTPLHASI IMQFQDQKKW ISKNLAAAVG VPVDVLNRRI NFWISKGILA ESMGADSADH AFTLVETMND TGKSGTIDGG CEELLAGEDD
801: GERSVASVED QLRKEMTVYE KFITGMLTNF GSMALDRIHN TLKMFCIADP TYDKSLQQLQ SFLSGLVAEE KLEFRDGMYF LKK
001: MEALGSSDCN LEILETLSDD AIQEITESYD GFFTTVESLI AGTGDSLVED EFVSHVYCLC KYGLDSLVRD HFLRSLEQAF EKGGASSFWQ HFDAYSEKKH
101: HNYGEEIQIV LCKALEEISI EKQYHEKCLS IVVHALQSFK EQSSDDRQNS DTERVHLFSR FQSMLSSTLM TTLPQHFPEI LHWYFKERLE ELSAIMDGDG
201: IEEQEDDCMD LDEKLRYKNG EMDVDEGCSQ GKRLGHDKLV KNIGKVVRDL RSIGFTSMAE NAYASAIFLL LKAKVHDLAG DDYRTSVLES IKEWIQTVPL
301: QFLNALLSYL GDSVSYGTTS SGLTSPLACC PSPSFSRVVT PSEGIVRWKL RLEYFAYETL QDLRIAKLFE IIVDYPESSP AIEDLKQCLE YTGQHSKLVE
401: SFISSLKYRL LTAGASTNDI LHQYVSTIKA LRAIDPAGVF LEAVGEPIRD YLRGRKDTIK CIVTMLTDGS GGNANGSGNP GDSLLEELMR DEESQENVGF
501: DDDFHTDDKQ AWINASRWEP DPVEADPLKG SLSQRKVDIL GMLVDIIGSK EQLVNEYRVM LAEKLLNKTD YDIDTEIRTV ELLKIHFGEA SMQRCEIMLN
601: DLIDSKRVNT NIKKASQTGA ELRENELSVD TLTSTILSTN FWPPIQDEPL ELPGPVDKLL SDYANRYHEI KTPRKLLWKK NLGTVKLELQ FEDRAMQFTV
701: SPTHAAIIMQ FQEKKSWTYK DLAEVIGIPI DALNRRVNFW ISKGVLREST GANSNSSVLT LVESITDSGK NEGEELLTGE EEGETSIASV EDQLRKEMTI
801: YEKFIMGMLT NFGSMALERI HNTLKMFCVA DPSYDKSLQQ LQSFLSGLVS EEKLEFRDGM YLLKK
101: HNYGEEIQIV LCKALEEISI EKQYHEKCLS IVVHALQSFK EQSSDDRQNS DTERVHLFSR FQSMLSSTLM TTLPQHFPEI LHWYFKERLE ELSAIMDGDG
201: IEEQEDDCMD LDEKLRYKNG EMDVDEGCSQ GKRLGHDKLV KNIGKVVRDL RSIGFTSMAE NAYASAIFLL LKAKVHDLAG DDYRTSVLES IKEWIQTVPL
301: QFLNALLSYL GDSVSYGTTS SGLTSPLACC PSPSFSRVVT PSEGIVRWKL RLEYFAYETL QDLRIAKLFE IIVDYPESSP AIEDLKQCLE YTGQHSKLVE
401: SFISSLKYRL LTAGASTNDI LHQYVSTIKA LRAIDPAGVF LEAVGEPIRD YLRGRKDTIK CIVTMLTDGS GGNANGSGNP GDSLLEELMR DEESQENVGF
501: DDDFHTDDKQ AWINASRWEP DPVEADPLKG SLSQRKVDIL GMLVDIIGSK EQLVNEYRVM LAEKLLNKTD YDIDTEIRTV ELLKIHFGEA SMQRCEIMLN
601: DLIDSKRVNT NIKKASQTGA ELRENELSVD TLTSTILSTN FWPPIQDEPL ELPGPVDKLL SDYANRYHEI KTPRKLLWKK NLGTVKLELQ FEDRAMQFTV
701: SPTHAAIIMQ FQEKKSWTYK DLAEVIGIPI DALNRRVNFW ISKGVLREST GANSNSSVLT LVESITDSGK NEGEELLTGE EEGETSIASV EDQLRKEMTI
801: YEKFIMGMLT NFGSMALERI HNTLKMFCVA DPSYDKSLQQ LQSFLSGLVS EEKLEFRDGM YLLKK
Arabidopsis Description
APC2APC2 [Source:UniProtKB/TrEMBL;Acc:A0A178VYA9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.