Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG97883 | Soybean | cytosol | 95.93 | 95.82 |
| KRH32716 | Soybean | golgi | 29.64 | 91.61 |
| VIT_01s0026g02730.t01 | Wine grape | cytosol | 75.68 | 75.76 |
| HORVU2Hr1G083840.8 | Barley | cytosol | 42.65 | 72.08 |
| Solyc05g007750.2.1 | Tomato | cytosol | 70.25 | 70.33 |
| AT2G04660.1 | Thale cress | cytosol | 68.78 | 70.29 |
| PGSC0003DMT400047444 | Potato | cytosol | 70.14 | 70.14 |
| CDY04835 | Canola | cytosol | 66.18 | 68.58 |
| Bra028905.1-P | Field mustard | cytosol | 66.29 | 68.46 |
| GSMUA_Achr3P19380_001 | Banana | cytosol | 67.19 | 67.89 |
| CDY30292 | Canola | cytosol | 64.14 | 66.94 |
| HORVU0Hr1G004870.2 | Barley | cytosol | 17.42 | 66.09 |
| Bra025616.1-P | Field mustard | cytosol | 62.1 | 65.91 |
| CDY30835 | Canola | cytosol | 62.22 | 65.63 |
| KXG20781 | Sorghum | cytosol | 63.12 | 64.96 |
| Zm00001d014685_P009 | Maize | cytosol | 63.12 | 64.88 |
| Os04t0484800-01 | Rice | cytosol | 63.01 | 64.47 |
| HORVU0Hr1G004980.2 | Barley | cytosol | 24.66 | 63.56 |
| TraesCS2A01G321000.1 | Wheat | cytosol | 61.65 | 63.37 |
| TraesCS2B01G361700.1 | Wheat | cytosol | 61.65 | 63.37 |
| TraesCS2D01G341700.1 | Wheat | cytosol | 61.65 | 63.37 |
| KRH74904 | Soybean | cytosol, extracellular, peroxisome | 7.35 | 60.75 |
| HORVU0Hr1G004910.1 | Barley | cytosol | 5.77 | 41.13 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:1.10.10.2620 | Gene3D:1.20.1310.10 | EntrezGene:100785428 | MapMan:13.3.4.1.1.3.1 | EMBL:ACUP02007116 |
| InterPro:APC_su2_C | InterPro:Cullin_N | InterPro:Cullin_homology | InterPro:Cullin_homology_sf | EnsemblPlantsGene:GLYMA_11G220500 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005680 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0031625 |
| GO:GO:0042787 | GO:GO:0061630 | UniProt:I1LMG8 | InterPro:IPR016158 | InterPro:IPR036388 | EnsemblPlants:KRH30995 |
| ProteinID:KRH30995 | ProteinID:KRH30995.1 | PFAM:PF00888 | PFAM:PF08672 | PFscan:PS50069 | PANTHER:PTHR11932 |
| PANTHER:PTHR11932:SF5 | SMART:SM00182 | SMART:SM01013 | SUPFAM:SSF46785 | SUPFAM:SSF75632 | UniParc:UPI00023CC40F |
| InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr11:+:31586131..31594148
Molecular Weight (calculated)
99927.5 Da
IEP (calculated)
4.730
GRAVY (calculated)
-0.325
Length
884 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEPNPCFFN PAILDSLTDD SVHEILDSYN DFCNATQSLL AGNGDLSVAS DFVSHVHTLC KHRLRSLVQD HFFRLLEETF ERNGASRFWR HFDPYFHVAG
101: LNKNDDLDID EDEIQSVLYN ALEEITLEKQ YQEKCLLMLV HALQSYKDQV SEDKHGFEGD RNYLTSKYQW IVSSVLMASL SRHFPVILHW YFKRKLEEVS
201: AIMDGEFCDD ASQNKDGMNL DEKGKICNKV GEMDVDECYS DHRFSENSRL VKNIGKVVLD LRNLGFTSMA EDAYASAIFL LLKAKVHDVA GDDFRSSVLQ
301: SIKSWIQAVP LQFLHALLVY LGDVVSYEST SSGLKSPLAP QPSSCCPGID TPSEGLVRWK LRLEYFAYET LQDLRIAKLF EIIVDYPESS PAIEDLKLCL
401: EYTGQHSKLV ESFISALRYR LLTAGASTND ILHQYVSTIK ALRTIDPAGV FLEAVGEPIR DYLRGRRDTI KCIVTMMTDG TGAHSSSSGN PGDSLLEELN
501: RDEEIQENAG VDDFNTDDRQ AWINAMRWQP DPVEADPLKG SRNQRKVDIL GMIVSIIGSK DQLVHEYRTM LAEKLLNKSD YDIDSEIRTL ELLKIHFGES
601: SLQKCEIMLN DLIGSKRTNS NIKATINQPS QTSVEVGDNA ISMDAISATI ISSNFWPPIQ DEPLNLPEPV DQLLSDYAKR FNEIKTPRKL QWKKSLGTIK
701: LELQFQDREI QFTVAPVHAS IIMKFQDQPN WTSKNLAAAI GIPADVLNRR INFWISKGII AESQGADSSD HVYTIVENMA ETSKNGASTG CAQELLGGEE
801: EEERSVASVE NQLRKEMTVY EKFILGMLTN FGSMALDRIH NTLKMFCIAD PPYDKSLQQL QSFLSGLVSE EKLELRDGMY FLKK
101: LNKNDDLDID EDEIQSVLYN ALEEITLEKQ YQEKCLLMLV HALQSYKDQV SEDKHGFEGD RNYLTSKYQW IVSSVLMASL SRHFPVILHW YFKRKLEEVS
201: AIMDGEFCDD ASQNKDGMNL DEKGKICNKV GEMDVDECYS DHRFSENSRL VKNIGKVVLD LRNLGFTSMA EDAYASAIFL LLKAKVHDVA GDDFRSSVLQ
301: SIKSWIQAVP LQFLHALLVY LGDVVSYEST SSGLKSPLAP QPSSCCPGID TPSEGLVRWK LRLEYFAYET LQDLRIAKLF EIIVDYPESS PAIEDLKLCL
401: EYTGQHSKLV ESFISALRYR LLTAGASTND ILHQYVSTIK ALRTIDPAGV FLEAVGEPIR DYLRGRRDTI KCIVTMMTDG TGAHSSSSGN PGDSLLEELN
501: RDEEIQENAG VDDFNTDDRQ AWINAMRWQP DPVEADPLKG SRNQRKVDIL GMIVSIIGSK DQLVHEYRTM LAEKLLNKSD YDIDSEIRTL ELLKIHFGES
601: SLQKCEIMLN DLIGSKRTNS NIKATINQPS QTSVEVGDNA ISMDAISATI ISSNFWPPIQ DEPLNLPEPV DQLLSDYAKR FNEIKTPRKL QWKKSLGTIK
701: LELQFQDREI QFTVAPVHAS IIMKFQDQPN WTSKNLAAAI GIPADVLNRR INFWISKGII AESQGADSSD HVYTIVENMA ETSKNGASTG CAQELLGGEE
801: EEERSVASVE NQLRKEMTVY EKFILGMLTN FGSMALDRIH NTLKMFCIAD PPYDKSLQQL QSFLSGLVSE EKLELRDGMY FLKK
001: MEALGSSDCN LEILETLSDD AIQEITESYD GFFTTVESLI AGTGDSLVED EFVSHVYCLC KYGLDSLVRD HFLRSLEQAF EKGGASSFWQ HFDAYSEKKH
101: HNYGEEIQIV LCKALEEISI EKQYHEKCLS IVVHALQSFK EQSSDDRQNS DTERVHLFSR FQSMLSSTLM TTLPQHFPEI LHWYFKERLE ELSAIMDGDG
201: IEEQEDDCMD LDEKLRYKNG EMDVDEGCSQ GKRLGHDKLV KNIGKVVRDL RSIGFTSMAE NAYASAIFLL LKAKVHDLAG DDYRTSVLES IKEWIQTVPL
301: QFLNALLSYL GDSVSYGTTS SGLTSPLACC PSPSFSRVVT PSEGIVRWKL RLEYFAYETL QDLRIAKLFE IIVDYPESSP AIEDLKQCLE YTGQHSKLVE
401: SFISSLKYRL LTAGASTNDI LHQYVSTIKA LRAIDPAGVF LEAVGEPIRD YLRGRKDTIK CIVTMLTDGS GGNANGSGNP GDSLLEELMR DEESQENVGF
501: DDDFHTDDKQ AWINASRWEP DPVEADPLKG SLSQRKVDIL GMLVDIIGSK EQLVNEYRVM LAEKLLNKTD YDIDTEIRTV ELLKIHFGEA SMQRCEIMLN
601: DLIDSKRVNT NIKKASQTGA ELRENELSVD TLTSTILSTN FWPPIQDEPL ELPGPVDKLL SDYANRYHEI KTPRKLLWKK NLGTVKLELQ FEDRAMQFTV
701: SPTHAAIIMQ FQEKKSWTYK DLAEVIGIPI DALNRRVNFW ISKGVLREST GANSNSSVLT LVESITDSGK NEGEELLTGE EEGETSIASV EDQLRKEMTI
801: YEKFIMGMLT NFGSMALERI HNTLKMFCVA DPSYDKSLQQ LQSFLSGLVS EEKLEFRDGM YLLKK
101: HNYGEEIQIV LCKALEEISI EKQYHEKCLS IVVHALQSFK EQSSDDRQNS DTERVHLFSR FQSMLSSTLM TTLPQHFPEI LHWYFKERLE ELSAIMDGDG
201: IEEQEDDCMD LDEKLRYKNG EMDVDEGCSQ GKRLGHDKLV KNIGKVVRDL RSIGFTSMAE NAYASAIFLL LKAKVHDLAG DDYRTSVLES IKEWIQTVPL
301: QFLNALLSYL GDSVSYGTTS SGLTSPLACC PSPSFSRVVT PSEGIVRWKL RLEYFAYETL QDLRIAKLFE IIVDYPESSP AIEDLKQCLE YTGQHSKLVE
401: SFISSLKYRL LTAGASTNDI LHQYVSTIKA LRAIDPAGVF LEAVGEPIRD YLRGRKDTIK CIVTMLTDGS GGNANGSGNP GDSLLEELMR DEESQENVGF
501: DDDFHTDDKQ AWINASRWEP DPVEADPLKG SLSQRKVDIL GMLVDIIGSK EQLVNEYRVM LAEKLLNKTD YDIDTEIRTV ELLKIHFGEA SMQRCEIMLN
601: DLIDSKRVNT NIKKASQTGA ELRENELSVD TLTSTILSTN FWPPIQDEPL ELPGPVDKLL SDYANRYHEI KTPRKLLWKK NLGTVKLELQ FEDRAMQFTV
701: SPTHAAIIMQ FQEKKSWTYK DLAEVIGIPI DALNRRVNFW ISKGVLREST GANSNSSVLT LVESITDSGK NEGEELLTGE EEGETSIASV EDQLRKEMTI
801: YEKFIMGMLT NFGSMALERI HNTLKMFCVA DPSYDKSLQQ LQSFLSGLVS EEKLEFRDGM YLLKK
Arabidopsis Description
APC2APC2 [Source:UniProtKB/TrEMBL;Acc:A0A178VYA9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.