Factsheet for HORVU6Hr1G015440.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G113700.1	Wheat	plastid	58.17	84.03
TraesCS6A01G084700.1	Wheat	cytosol, mitochondrion, plastid	57.69	82.19
TraesCS6B01G116900.1	Wheat	plastid	56.25	81.82
Os02t0130000-01	Rice	mitochondrion, plastid	37.98	60.31
GSMUA_AchrUn_...	Banana	cytosol	20.19	60.0
Zm00001d015127_P001	Maize	mitochondrion	30.77	53.78
GSMUA_Achr7P17340_001	Banana	mitochondrion	32.69	52.31
VIT_02s0087g00810.t01	Wine grape	mitochondrion	28.85	52.17
AT1G31760.1	Thale cress	mitochondrion	27.88	51.79
CDY12300	Canola	mitochondrion	23.08	51.61
KRH76467	Soybean	nucleus	32.21	50.76
CDY49157	Canola	mitochondrion	22.6	50.54
KRH28989	Soybean	mitochondrion, plastid	31.25	49.24
CDY50950	Canola	mitochondrion	27.4	49.14
Bra033879.1-P	Field mustard	mitochondrion	27.4	49.14
CDY47689	Canola	mitochondrion	27.4	48.72
Bra023201.1-P	Field mustard	mitochondrion	26.92	48.7
AT2G35605.1	Thale cress	mitochondrion	25.0	47.71
Zm00001d053979_P001	Maize	mitochondrion	30.29	47.01
Solyc08g005590.2.1	Tomato	nucleus	26.92	45.9
EES06225	Sorghum	mitochondrion	28.85	45.8
CDY51761	Canola	mitochondrion	29.33	45.52
PGSC0003DMT400047544	Potato	plastid	26.44	45.08
VIT_15s0024g00650.t01	Wine grape	mitochondrion	27.4	44.53
Solyc08g075400.2.1	Tomato	plastid	25.96	43.55
CDY50651	Canola	plastid	30.29	43.15
Bra031985.1-P	Field mustard	mitochondrion	31.25	42.48
PGSC0003DMT400004968	Potato	plastid	25.0	41.94
AT3G03590.1	Thale cress	mitochondrion, plastid	28.37	41.26
GSMUA_Achr4P05700_001	Banana	cytosol, mitochondrion	25.0	40.0
HORVU5Hr1G028290.1	Barley	plastid	26.92	36.6
GSMUA_Achr4P12450_001	Banana	endoplasmic reticulum, extracellular, vacuole	24.04	24.63
HORVU5Hr1G097590.1	Barley	nucleus	17.79	10.36
HORVU7Hr1G049900.8	Barley	cytosol, nucleus, plastid	14.9	9.2
HORVU2Hr1G109030.1	Barley	cytosol	15.38	7.8

Protein Annotations

EnsemblPlants:HORVU6Hr1G015440.1	EnsemblPlantsGene:HORVU6Hr1G015440	Gene3D:1.10.245.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR036885	InterPro:SWIB_MDM2_dom_sf	InterPro:SWIB_MDM2_domain	InterPro:SWIB_domain	PANTHER:PTHR13844	PANTHER:PTHR13844:SF8
PFAM:PF02201	SEG:seg	SMART:SM00151	SUPFAM:SSF47592	UniParc:UPI000B47915D	UniProt:A0A287TEF2
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:-:34019386..34024407

Molecular Weight (calculated)

21855.6 Da

IEP (calculated)

11.285

GRAVY (calculated)

-0.442

Length

208 amino acids

Sequence
(BLAST)

001: KAAGLLLPHC RDQKAANTKC APCLPPNPKP PKTLRRPRPH TLTPRRSGAR RDPPTHPTAM STAAYTVLRG CRSFMSSAAA AAAAGSKKPA AAAAAAAAAK
101: GGKKSATAAA KPKAAKEKGP VDPNNLRGIM RPVPVSDALS KFGGAPNISR SGVLKIVWDY VKANSLQNPA NKKEIICDEK LKTIFDGRNT VHMTEVTKLL
201: SPHFVKST

Best Arabidopsis Sequence Match ( AT1G31760.1 )
(BLAST)

001: MAGISRVLGG FRTLMSKAAT VEAVTVAGEG KGIFKTRPVS QQLASFAGER ELTRGSALKK VWEYVKLHNL QNPANKKEIH CDDKLKTIFD GKDKVGITEI
101: MKLLSPHFPK SV

Arabidopsis Description

At1g31760 [Source:UniProtKB/TrEMBL;Acc:Q9C504]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.