Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- nucleus 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | cytosol | 43.48 | 71.43 |
| PGSC0003DMT400004968 | Potato | plastid | 59.13 | 54.84 |
| VIT_15s0024g00650.t01 | Wine grape | mitochondrion | 60.87 | 54.69 |
| Solyc08g075400.2.1 | Tomato | plastid | 58.26 | 54.03 |
| GSMUA_Achr7P17340_001 | Banana | mitochondrion | 59.13 | 52.31 |
| Zm00001d015127_P001 | Maize | mitochondrion | 48.7 | 47.06 |
| Os02t0130000-01 | Rice | mitochondrion, plastid | 52.17 | 45.8 |
| CDY51761 | Canola | mitochondrion | 49.57 | 42.54 |
| AT3G03590.1 | Thale cress | mitochondrion, plastid | 52.17 | 41.96 |
| Zm00001d053979_P001 | Maize | mitochondrion | 48.7 | 41.79 |
| TraesCSU01G113700.1 | Wheat | plastid | 52.17 | 41.67 |
| GSMUA_Achr4P05700_001 | Banana | cytosol, mitochondrion | 46.96 | 41.54 |
| TraesCS6B01G116900.1 | Wheat | plastid | 51.3 | 41.26 |
| TraesCS6A01G084700.1 | Wheat | cytosol, mitochondrion, plastid | 52.17 | 41.1 |
| EES06225 | Sorghum | mitochondrion | 45.22 | 39.69 |
| Bra031985.1-P | Field mustard | mitochondrion | 51.3 | 38.56 |
| CDY50651 | Canola | plastid | 48.7 | 38.36 |
| VIT_03s0091g00430.t01 | Wine grape | plastid | 45.22 | 35.86 |
| HORVU6Hr1G015440.1 | Barley | plastid | 52.17 | 28.85 |
| GSMUA_Achr4P12450_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 42.61 | 24.14 |
| VIT_03s0063g01070.t01 | Wine grape | nucleus | 25.22 | 23.2 |
| VIT_07s0197g00070.t01 | Wine grape | nucleus | 29.57 | 11.41 |
| VIT_00s0187g00240.t01 | Wine grape | nucleus | 27.83 | 9.3 |
| VIT_00s0187g00190.t01 | Wine grape | cytosol | 27.83 | 9.22 |
| VIT_19s0090g01460.t01 | Wine grape | cytosol | 26.09 | 9.06 |
Protein Annotations
| Gene3D:1.10.245.10 | EntrezGene:100249480 | wikigene:100249480 | MapMan:35.2 | ProteinID:CBI29190 | ProteinID:CBI29190.3 |
| UniProt:D7TFB7 | EMBL:FN595769 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR036885 |
| EntrezGene:LOC100249480 | wikigene:LOC100249480 | PFAM:PF02201 | PANTHER:PTHR13844 | PANTHER:PTHR13844:SF8 | SMART:SM00151 |
| SUPFAM:SSF47592 | InterPro:SWIB_MDM2_dom_sf | InterPro:SWIB_MDM2_domain | InterPro:SWIB_domain | UniParc:UPI00015CC508 | ArrayExpress:VIT_02s0087g00810 |
| EnsemblPlantsGene:VIT_02s0087g00810 | EnsemblPlants:VIT_02s0087g00810.t01 | unigene:Vvi.20790 | RefSeq:XP_002270707 | RefSeq:XP_002270707.1 | SEG:seg |
Description
No Description!
Coordinates
chr2:-:18405633..18408759
Molecular Weight (calculated)
12417.4 Da
IEP (calculated)
10.737
GRAVY (calculated)
-0.220
Length
115 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSRVLGGCR ALMEAAKANA NANTNTKVIR QGGGITKPVP VSPQLGKFLG GVPQASRSLA IKKVWEHIKL HNLQNPTNKK EICCDEKLKT IFDGKDKVGF
101: LEIAKLLSPH FVKIG
101: LEIAKLLSPH FVKIG
001: MSRVFGACRV LMAKAASSTG AKTGRQGTGI LKVVPVSKPL ANFIGENEVS RTTAVKKIWE YIKLNNLQNP VNKREILCDE QLKTIFSGKD TVGFLEISKL
101: LSQHFPKSA
101: LSQHFPKSA
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q93W30]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.