Factsheet for GSMUA_Achr4P05700_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	40.0	74.29
VIT_02s0087g00810.t01	Wine grape	mitochondrion	41.54	46.96
GSMUA_Achr7P17340_001	Banana	mitochondrion	46.92	46.92
Solyc08g005590.2.1	Tomato	nucleus	43.85	46.72
VIT_15s0024g00650.t01	Wine grape	mitochondrion	45.38	46.09
PGSC0003DMT400047544	Potato	plastid	43.08	45.9
CDY12300	Canola	mitochondrion	32.31	45.16
CDY49157	Canola	mitochondrion	32.31	45.16
Os02t0130000-01	Rice	mitochondrion, plastid	43.85	43.51
AT2G35605.1	Thale cress	mitochondrion	36.15	43.12
Zm00001d015127_P001	Maize	mitochondrion	39.23	42.86
Bra023201.1-P	Field mustard	mitochondrion	37.69	42.61
Solyc08g075400.2.1	Tomato	plastid	38.46	40.32
PGSC0003DMT400004968	Potato	plastid	38.46	40.32
AT1G31760.1	Thale cress	mitochondrion	34.62	40.18
CDY50950	Canola	mitochondrion	35.38	39.66
Bra033879.1-P	Field mustard	mitochondrion	35.38	39.66
CDY47689	Canola	mitochondrion	35.38	39.32
EES06225	Sorghum	mitochondrion	36.92	36.64
Zm00001d053979_P001	Maize	mitochondrion	37.69	36.57
TraesCS6B01G116900.1	Wheat	plastid	40.0	36.36
TraesCSU01G113700.1	Wheat	plastid	40.0	36.11
AT3G03590.1	Thale cress	mitochondrion, plastid	39.23	35.66
TraesCS6A01G084700.1	Wheat	cytosol, mitochondrion, plastid	39.23	34.93
KRH28989	Soybean	mitochondrion, plastid	35.38	34.85
KRH76467	Soybean	nucleus	35.38	34.85
CDY51761	Canola	mitochondrion	35.38	34.33
GSMUA_Achr3P30180_001	Banana	plastid	36.92	34.29
GSMUA_Achr10P...	Banana	plastid	36.92	34.04
GSMUA_Achr7P26330_001	Banana	plastid	36.15	33.57
CDY50651	Canola	plastid	36.92	32.88
Bra031985.1-P	Field mustard	mitochondrion	36.15	30.72
GSMUA_Achr4P12450_001	Banana	endoplasmic reticulum, extracellular, vacuole	47.69	30.54
HORVU6Hr1G015440.1	Barley	plastid	40.0	25.0
GSMUA_Achr2P13370_001	Banana	cytosol	11.54	23.44
GSMUA_Achr4P28200_001	Banana	nucleus	23.08	9.49
GSMUA_Achr1P19520_001	Banana	cytosol	24.62	8.67
GSMUA_Achr3P11900_001	Banana	cytosol	23.85	8.49

Protein Annotations

EnsemblPlants:GSMUA_Achr4P05700_001	EnsemblPlants:GSMUA_Achr4T05700_001	EnsemblPlantsGene:GSMUA_Achr4G05700_001	Gene3D:1.10.245.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR036885	InterPro:SWIB_MDM2_dom_sf	InterPro:SWIB_MDM2_domain	InterPro:SWIB_domain	PANTHER:PTHR13844
PANTHER:PTHR13844:SF8	PFAM:PF02201	SMART:SM00151	SUPFAM:SSF47592	UniParc:UPI000296CA17	UniProt:M0SLD7
MapMan:35.2	:	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G05700_001]

Coordinates

chr4:-:4412286..4415985

Molecular Weight (calculated)

14707.1 Da

IEP (calculated)

10.436

GRAVY (calculated)

-0.376

Length

130 amino acids

Sequence
(BLAST)

001: MAVKRLALPH TTLAEGIKYL DCPFRAETPY AYELELQTRN YGAAGKRTAG LLKPLRVSRA MEKFVGASEI SRPGAIKKIW DHIKLNQLQN PSNKREIQCD
101: FKLKSIFDGR DKVGMLEIAK LIAPHFLKPN

Best Arabidopsis Sequence Match ( AT2G35605.1 )
(BLAST)

001: MSRVFGACRV LMAKAASSTG AKTGRQGTGI LKVVPVSKPL ANFIGENEVS RTTAVKKIWE YIKLNNLQNP VNKREILCDE QLKTIFSGKD TVGFLEISKL
101: LSQHFPKSA

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q93W30]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.