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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 3
  • plastid 2
  • nucleus 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_03s0063g01070.t01 Wine grape nucleus 50.0 25.6
GSMUA_AchrUn_... Banana cytosol 18.75 17.14
GSMUA_Achr7P26330_001 Banana plastid 37.5 17.14
GSMUA_Achr3P30180_001 Banana plastid 37.5 17.14
GSMUA_Achr10P... Banana plastid 32.81 14.89
GSMUA_Achr4P28200_001 Banana nucleus 71.88 14.56
Zm00001d034159_P002 Maize cytosol 57.81 14.23
VIT_07s0197g00070.t01 Wine grape nucleus 64.06 13.76
KRH76945 Soybean nucleus 67.19 12.76
KRH28515 Soybean nucleus 67.19 12.43
GSMUA_Achr7P17340_001 Banana mitochondrion 25.0 12.31
EER93399 Sorghum nucleus 62.5 12.27
GSMUA_Achr4P05700_001 Banana cytosol, mitochondrion 23.44 11.54
TraesCS5D01G411700.1 Wheat nucleus 59.38 11.18
TraesCS5A01G401500.2 Wheat nucleus 59.38 11.11
Solyc01g108290.2.1 Tomato nucleus 56.25 10.81
TraesCS5B01G406200.2 Wheat nucleus 59.38 10.44
Zm00001d013204_P001 Maize nucleus 62.5 10.42
PGSC0003DMT400066349 Potato cytosol 54.69 10.42
AT1G49520.1 Thale cress nucleus 59.38 10.22
HORVU5Hr1G097590.1 Barley nucleus 54.69 9.8
GSMUA_Achr4P12450_001 Banana endoplasmic reticulum, extracellular, vacuole 29.69 9.36
Os03t0764450-00 Rice nucleus 59.38 8.0
Bra022384.1-P Field mustard nucleus 56.25 7.98
AT3G19080.4 Thale cress nucleus 57.81 7.97
CDX92300 Canola nucleus 56.25 7.96
CDX99270 Canola nucleus 56.25 7.76
GSMUA_Achr1P19520_001 Banana cytosol 39.06 6.78
GSMUA_Achr3P11900_001 Banana cytosol 37.5 6.58
Protein Annotations
EnsemblPlants:GSMUA_Achr2P13370_001EnsemblPlants:GSMUA_Achr2T13370_001EnsemblPlantsGene:GSMUA_Achr2G13370_001Gene3D:1.10.245.10GO:GO:0003674GO:GO:0005488
GO:GO:0005515InterPro:IPR036885InterPro:SWIB_MDM2_dom_sfInterPro:SWIB_MDM2_domainPANTHER:PTHR13844PANTHER:PTHR13844:SF23
PFAM:PF02201SUPFAM:SSF47592UniParc:UPI000296E587UniProt:M0S7M8MapMan:35.2:
Description
upstream activation factor subunit spp27, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G13370_001]
Coordinates
chr2:+:15536132..15536693
Molecular Weight (calculated)
7347.0 Da
IEP (calculated)
8.918
GRAVY (calculated)
-0.239
Length
64 amino acids
Sequence
(BLAST)
1: MSFCVIDVRS NKLSDEVRKR GGGFTKLCSL SPLLQDFVGK SELARTEVVK WLWPYICEKK LQDP
Best Arabidopsis Sequence Match ( AT1G49520.1 )
(BLAST)
001: MVSDSDLVTQ LREILRSSDL ETTTPASVRR QLEVYFGVEL TDKKAFVREQ IDAFLESDAL LESKPEQEEE DCNGDQNDEE GSENDDDKTE LPVKAKKRGG
101: GFNKICQLSP QLEKFLGTSQ LARTEVVKKM WAYIREHDLQ DPTNRRNILC DESLHSLFRV KTINMFQMNK ALAKHIWALN DGDGCFKNVK EEDVDETSGE
201: RDEKDVKIEE ALENNEEESR EEEDRSVRKR KRKKRKPAKS EEKPKKKGGG FTKVCSLSPE LQAFTGTPQL ARTEVVKMLW KYIKENNLQD PSDKRTIICD
301: ESLRSLFPVE SINMFQMNKQ LAKHIWPLVQ EDEAGTTNDP EKGKQKMKME TDEDNDESNE EKATSSRIKT EE
Arabidopsis Description
At1g49520 [Source:UniProtKB/TrEMBL;Acc:Q501B9]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.