CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053979_P001	Maize	mitochondrion	78.63	76.87
Zm00001d015127_P001	Maize	mitochondrion	68.7	75.63
Os02t0130000-01	Rice	mitochondrion, plastid	56.49	56.49
GSMUA_AchrUn_...	Banana	cytosol	29.77	55.71
GSMUA_Achr7P17340_001	Banana	mitochondrion	47.33	47.69
AT2G35605.1	Thale cress	mitochondrion	38.17	45.87
AT1G31760.1	Thale cress	mitochondrion	38.93	45.54
VIT_02s0087g00810.t01	Wine grape	mitochondrion	39.69	45.22
PGSC0003DMT400047544	Potato	plastid	41.98	45.08
Solyc08g005590.2.1	Tomato	nucleus	41.22	44.26
KRH76467	Soybean	nucleus	44.27	43.94
CDY47689	Canola	mitochondrion	38.93	43.59
Bra033879.1-P	Field mustard	mitochondrion	38.17	43.1
CDY50950	Canola	mitochondrion	38.17	43.1
CDY12300	Canola	mitochondrion	30.53	43.01
Bra023201.1-P	Field mustard	mitochondrion	37.4	42.61
TraesCS6A01G084700.1	Wheat	cytosol, mitochondrion, plastid	47.33	42.47
KRH28989	Soybean	mitochondrion, plastid	42.75	42.42
VIT_15s0024g00650.t01	Wine grape	mitochondrion	41.22	42.19
AT3G03590.1	Thale cress	mitochondrion, plastid	45.8	41.96
CDY49157	Canola	mitochondrion	29.77	41.94
TraesCSU01G113700.1	Wheat	plastid	45.8	41.67
TraesCS6B01G116900.1	Wheat	plastid	44.27	40.56
Solyc08g075400.2.1	Tomato	plastid	38.17	40.32
PGSC0003DMT400004968	Potato	plastid	38.17	40.32
EES17082	Sorghum	plastid	44.27	39.46
CDY51761	Canola	mitochondrion	38.93	38.06
GSMUA_Achr4P05700_001	Banana	cytosol, mitochondrion	36.64	36.92
Bra031985.1-P	Field mustard	mitochondrion	42.75	36.6
EER90846	Sorghum	plastid	39.69	36.36
CDY50651	Canola	plastid	39.69	35.62
HORVU6Hr1G015440.1	Barley	plastid	45.8	28.85
GSMUA_Achr4P12450_001	Banana	endoplasmic reticulum, extracellular, vacuole	38.17	24.63
EER93399	Sorghum	nucleus	26.72	10.74
KXG27277	Sorghum	cytosol	28.24	9.37
KXG25652	Sorghum	nucleus	29.77	9.11

Protein Annotations

EnsemblPlants:EES06225	EnsemblPlantsGene:SORBI_3004G028400	EntrezGene:8057506	Gene3D:1.10.245.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR036885	InterPro:SWIB_MDM2_dom_sf	InterPro:SWIB_MDM2_domain	InterPro:SWIB_domain	PANTHER:PTHR13844
PANTHER:PTHR13844:SF8	PFAM:PF02201	ProteinID:EES06225	ProteinID:EES06225.1	RefSeq:XP_002453249.1	SEG:seg
SMART:SM00151	SUPFAM:SSF47592	UniParc:UPI0001A85F85	UniProt:C5XTT3	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr4:-:2267899..2269984

Molecular Weight (calculated)

13771.0 Da

IEP (calculated)

11.560

GRAVY (calculated)

-0.061

Length

131 amino acids

Sequence
(BLAST)

001: MAAVARVFRG SLFLMSPAAG TGKAAGAKAA AAAATKKRTK APSTEPRVPT GISKPIPVSA ELSRFAGGAP EVARSQAVKL IWAHIKAHGL QDPAKKTEIN
101: CDATLKSLFG GRDRIGMLEI MKLLRPHFLK N

Best Arabidopsis Sequence Match ( AT2G14880.1 )
(BLAST)

001: MAVSSGTFST FLCIKTTSFR NPSTPLSSLR FASHPAAKLR LVRAVTSATE SSEPTATNKR VPRGIMKPRP VSPEMQDIVE LPEIARTQAL KRIWAYIKEH
101: DLQDPQNKRE ILCDEKLKKI FEGRDRVGFL EIAKLIGPHF L

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:O82326]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.