Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 3
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g005590.2.1 | Tomato | nucleus | 94.26 | 94.26 |
| PGSC0003DMT400004968 | Potato | plastid | 68.85 | 67.74 |
| CDY49157 | Canola | mitochondrion | 49.18 | 64.52 |
| CDY12300 | Canola | mitochondrion | 48.36 | 63.44 |
| GSMUA_AchrUn_... | Banana | cytosol | 36.07 | 62.86 |
| AT2G35605.1 | Thale cress | mitochondrion | 55.74 | 62.39 |
| Bra023201.1-P | Field mustard | mitochondrion | 56.56 | 60.0 |
| CDY47689 | Canola | mitochondrion | 54.92 | 57.27 |
| Bra033879.1-P | Field mustard | mitochondrion | 54.1 | 56.9 |
| CDY50950 | Canola | mitochondrion | 54.1 | 56.9 |
| AT1G31760.1 | Thale cress | mitochondrion | 51.64 | 56.25 |
| KRH28989 | Soybean | mitochondrion, plastid | 57.38 | 53.03 |
| GSMUA_Achr7P17340_001 | Banana | mitochondrion | 55.74 | 52.31 |
| KRH76467 | Soybean | nucleus | 56.56 | 52.27 |
| Os02t0130000-01 | Rice | mitochondrion, plastid | 53.28 | 49.62 |
| Zm00001d015127_P001 | Maize | mitochondrion | 44.26 | 45.38 |
| GSMUA_Achr4P05700_001 | Banana | cytosol, mitochondrion | 45.9 | 43.08 |
| EES06225 | Sorghum | mitochondrion | 45.08 | 41.98 |
| Zm00001d053979_P001 | Maize | mitochondrion | 45.08 | 41.04 |
| PGSC0003DMT400059663 | Potato | plastid | 44.26 | 39.13 |
| TraesCSU01G113700.1 | Wheat | plastid | 45.9 | 38.89 |
| PGSC0003DMT400025339 | Potato | plastid | 43.44 | 38.69 |
| TraesCS6B01G116900.1 | Wheat | plastid | 45.08 | 38.46 |
| TraesCS6A01G084700.1 | Wheat | cytosol, mitochondrion, plastid | 45.08 | 37.67 |
| PGSC0003DMT400066526 | Potato | plastid | 44.26 | 37.24 |
| GSMUA_Achr4P12450_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 49.18 | 29.56 |
| HORVU6Hr1G015440.1 | Barley | plastid | 45.08 | 26.44 |
| PGSC0003DMT400001975 | Potato | nucleus | 31.15 | 12.84 |
| PGSC0003DMT400066349 | Potato | cytosol | 35.25 | 12.8 |
| PGSC0003DMT400034549 | Potato | cytosol | 27.87 | 9.37 |
Protein Annotations
| Gene3D:1.10.245.10 | EntrezGene:102600426 | MapMan:35.2 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | InterPro:IPR036885 |
| UniProt:M1BKZ2 | PFAM:PF02201 | EnsemblPlantsGene:PGSC0003DMG400018478 | PGSC:PGSC0003DMG400018478 | EnsemblPlants:PGSC0003DMT400047544 | PANTHER:PTHR13844 |
| PANTHER:PTHR13844:SF8 | SMART:SM00151 | SUPFAM:SSF47592 | InterPro:SWIB_MDM2_dom_sf | InterPro:SWIB_MDM2_domain | InterPro:SWIB_domain |
| UniParc:UPI0002956504 | RefSeq:XP_006361226.1 | : | : | : | : |
Description
SWIb domain-containing protein [Source:PGSC_GENE;Acc:PGSC0003DMG400018478]
Coordinates
chr8:-:3595557..3598481
Molecular Weight (calculated)
13220.1 Da
IEP (calculated)
10.778
GRAVY (calculated)
-0.355
Length
122 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSRVFGN YCRTLMAAAK TSTGKIPPAT STTAAGKGRS KGILKPQPIS PALQKFVGTS EIARTDAVKK IWDYIKTNNL QNPANKKEIN CDDKLKTIFA
101: GKDKVGFLEI AKLLSFHFQK AS
101: GKDKVGFLEI AKLLSFHFQK AS
001: MSRVFGACRV LMAKAASSTG AKTGRQGTGI LKVVPVSKPL ANFIGENEVS RTTAVKKIWE YIKLNNLQNP VNKREILCDE QLKTIFSGKD TVGFLEISKL
101: LSQHFPKSA
101: LSQHFPKSA
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q93W30]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.