Factsheet for Solyc02g070450.1.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc06g061180.1.1
Solyc09g015380.1.1
Solyc10g076410.1.1
Solyc10g085310.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G18340.1	Solyc09g015380.1.1	AT2G38310.1	19407142
AT4G18340.1	Solyc10g076410.1.1	AT2G38310.1	19407142
AT4G18340.1	Solyc10g085310.1.1	AT2G38310.1	19407142
AT4G18340.1	Solyc06g061180.1.1	AT4G17870.1	19407142

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0003g03690.t01	Wine grape	extracellular	66.92	71.2
KRH21069	Soybean	vacuole	62.91	62.91
KRH11184	Soybean	endoplasmic reticulum, extracellular, vacuole	62.66	62.81
KRG89350	Soybean	extracellular, vacuole	61.9	61.75
Bra012604.1-P	Field mustard	vacuole	59.15	59.45
CDX90405	Canola	vacuole	59.15	59.45
AT4G18340.1	Thale cress	vacuole	59.15	59.45
CDY01532	Canola	vacuole	58.65	58.94
CDX78840	Canola	vacuole	58.65	58.35
CDX99476	Canola	vacuole	58.65	58.35
CDX76528	Canola	extracellular, vacuole	57.64	58.08
Bra013297.1-P	Field mustard	vacuole	58.15	57.86
KRH50394	Soybean	extracellular, vacuole	62.41	57.24
CDY34065	Canola	extracellular, vacuole	57.64	56.93
Zm00001d046134_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	55.14	54.05
EER88444	Sorghum	extracellular, vacuole	54.39	53.19
TraesCS7A01G349200.1	Wheat	endoplasmic reticulum, extracellular	53.63	52.84
TraesCS7B01G233500.1	Wheat	extracellular	53.13	52.35
TraesCS7D01G329400.1	Wheat	endoplasmic reticulum, extracellular	52.88	52.1
Solyc11g068440.1.1	Tomato	extracellular	45.61	47.89
HORVU7Hr1G079650.7	Barley	extracellular, vacuole	51.63	46.92
Os06t0531000-00	Rice	vacuole	52.63	42.34
Solyc08g083310.2.1	Tomato	nucleus	44.61	42.08
Solyc12g055840.1.1	Tomato	nucleus	43.61	41.23
Solyc03g082900.2.1	Tomato	extracellular	38.85	41.01
Solyc11g071520.1.1	Tomato	extracellular	39.35	40.99
Solyc06g073710.2.1	Tomato	golgi, mitochondrion, plastid, vacuole	39.6	38.35
Solyc07g008150.2.1	Tomato	extracellular, vacuole	36.34	37.18
Solyc12g040860.1.1	Tomato	extracellular, plasma membrane, vacuole	39.35	34.43
Solyc07g049370.2.1	Tomato	extracellular, vacuole	40.35	34.4
Solyc04g080260.2.1	Tomato	extracellular	37.84	34.24
Solyc12g014420.1.1	Tomato	extracellular	41.1	34.17
Solyc06g076170.2.1	Tomato	extracellular	37.34	33.18
Solyc09g057630.2.1	Tomato	nucleus	36.34	31.25
Solyc12g008580.1.1	Tomato	extracellular	38.35	30.85
Solyc07g005330.2.1	Tomato	extracellular	35.34	30.72
Solyc12g098560.1.1	Tomato	extracellular	34.09	29.63
Solyc01g109570.2.1	Tomato	extracellular	35.09	29.6
Solyc05g054440.2.1	Tomato	unclear	36.59	27.76
Solyc04g007910.2.1	Tomato	extracellular	33.83	26.73
Solyc08g005000.2.1	Tomato	extracellular	26.07	23.74
Solyc02g080660.2.1	Tomato	golgi, plasma membrane, vacuole	21.05	20.34

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:3.20.20.80	MapMan:50.3.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0030246	GO:GO:0030247
GO:GO:0046658	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	UniProt:K4B826	PFAM:PF00332	PANTHER:PTHR32227
PANTHER:PTHR32227:SF85	SUPFAM:SSF51445	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc02g070450.1	EnsemblPlants:Solyc02g070450.1.1	TMHMM:TMhelix
UniParc:UPI000276884C	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2:-:40185199..40186946

Molecular Weight (calculated)

44696.9 Da

IEP (calculated)

6.520

GRAVY (calculated)

0.017

Length

399 amino acids

Sequence
(BLAST)

001: MDAPLRSTTS LLSFFLLFFL GLNMFKQVES LGINYGQVAN NLPPPEKVLQ LLHALKITKA RIYDTNPQVL TTFANTNIEL IVTVENQMLA TLCDQQQAVQ
101: WVTSHIRPYF PATNITGIAV GNEIFTDENM SLMTYLVPAM VSIHAALVKT GLSQYIQVSS PNSLAVLANS YPPSAGSFRS DLSEIMQQFL QFLATTKSPF
201: WINAYPYFAY KDNPNKISLD YVLFNSNEGM IDPYTKLHYD NMLYAQVDAA IFAIARMGFN GLEVKISETG WPSKGDTNEI GATLQNAAIY NRNILRRQLL
301: NEGTPLRPTV RLDIYLFALF NEDMKPGPTS ERNYGLFQPD GTMAYNVGLL STTSSNTEPA SASISLASSA PPKVKRVGYQ SLINWMMMMF VYFWWLCKC

Best Arabidopsis Sequence Match ( AT1G30080.1 )
(BLAST)

001: MSNMFSRIAM TNSIVLLLFS LTFLEHGLLF QRVSSLGINY GQVGDNLPPP DKVLQLLSSL HINKTRIYDT NPRVLTSFAN SNIELFVTVE NEMLPSLVDP
101: QQALQWVTTR IKPYFPATKI GGIAVGNELY TDDDSSLIGY LMPAMMSIHG ALVQTGLDKY IQVSTPNSLS VLQESYPPSA GCFRPEVAGV MTQLLGFLRN
201: TNSPFWINAY PYFAYKDSPT KIPLDYVLFN PNPGMVDPYT KYRYDNMLYA QVDAVIFAMA RLGFKDIEVG VSETGWPSKG DGDEVGATVA NAAVYNKNIL
301: RRQLQNEGTP LRPNLSFDVY LFALFNEDLK PGPTSERNYG LYQPDETMTY NVGLLSSSSL TSTSTTSSTS IISLTSSAST ALKKGKQRLM YWTCVYLLAI
401: HMLIRRSY

Arabidopsis Description

Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I4R0]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.