Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 7
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400031570 | Potato | extracellular, vacuole | 91.96 | 93.51 |
| Solyc12g055840.1.1 | Tomato | nucleus | 72.58 | 72.75 |
| VIT_02s0025g02770.t01 | Wine grape | extracellular | 64.3 | 67.16 |
| KRH34248 | Soybean | extracellular, plasma membrane, vacuole | 62.65 | 64.01 |
| CDX93815 | Canola | extracellular | 59.81 | 61.11 |
| Bra023293.1-P | Field mustard | extracellular | 59.57 | 60.87 |
| CDY69080 | Canola | extracellular | 59.57 | 60.29 |
| AT1G32860.1 | Thale cress | extracellular, plasma membrane, vacuole | 58.87 | 58.45 |
| CDY13362 | Canola | extracellular, vacuole | 55.08 | 56.28 |
| AT5G42100.1 | Thale cress | extracellular, vacuole | 56.5 | 56.24 |
| Bra028526.1-P | Field mustard | extracellular, vacuole | 56.74 | 55.81 |
| CDX67530 | Canola | extracellular | 56.03 | 55.5 |
| Solyc11g068440.1.1 | Tomato | extracellular | 47.52 | 52.89 |
| TraesCS1A01G055900.1 | Wheat | extracellular | 34.28 | 50.17 |
| Zm00001d028410_P001 | Maize | vacuole | 41.37 | 48.48 |
| TraesCS1D01G056500.1 | Wheat | extracellular, vacuole | 44.68 | 46.67 |
| Zm00001d030361_P001 | Maize | plasma membrane | 44.44 | 46.53 |
| TraesCS1B01G072500.1 | Wheat | extracellular, vacuole | 44.44 | 46.31 |
| HORVU1Hr1G010910.2 | Barley | extracellular, vacuole | 44.92 | 46.12 |
| TraesCS1A01G049800.1 | Wheat | extracellular, vacuole | 44.21 | 46.06 |
| TraesCS1B01G072600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 43.74 | 45.91 |
| Os10t0160100-01 | Rice | extracellular, vacuole | 45.15 | 45.48 |
| TraesCS4A01G067900.1 | Wheat | vacuole | 44.21 | 44.74 |
| TraesCS4B01G225100.1 | Wheat | vacuole | 44.21 | 44.74 |
| TraesCS4D01G225700.1 | Wheat | vacuole | 44.21 | 44.74 |
| Solyc02g070450.1.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 42.08 | 44.61 |
| Solyc11g071520.1.1 | Tomato | extracellular | 39.72 | 43.86 |
| TraesCS7A01G069700.1 | Wheat | extracellular, vacuole | 44.44 | 43.82 |
| TraesCSU01G153100.1 | Wheat | extracellular, vacuole | 44.44 | 43.82 |
| HORVU1Hr1G011210.1 | Barley | vacuole | 44.44 | 43.72 |
| TraesCS7D01G065400.1 | Wheat | extracellular, vacuole | 44.21 | 43.59 |
| KXG38664 | Sorghum | extracellular, vacuole | 44.68 | 43.55 |
| Os03t0246100-01 | Rice | extracellular, vacuole | 43.97 | 43.26 |
| HORVU4Hr1G063240.7 | Barley | golgi, vacuole | 43.97 | 42.96 |
| Os06t0131500-01 | Rice | plastid | 45.39 | 42.76 |
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane, vacuole | 39.24 | 41.92 |
| Zm00001d036051_P001 | Maize | extracellular, vacuole | 42.08 | 41.78 |
| HORVU7Hr1G012550.1 | Barley | vacuole | 42.32 | 40.04 |
| Solyc07g008150.2.1 | Tomato | extracellular, vacuole | 36.88 | 40.0 |
| Solyc06g073710.2.1 | Tomato | golgi, mitochondrion, plastid, vacuole | 38.53 | 39.56 |
| Solyc03g082900.2.1 | Tomato | extracellular | 34.99 | 39.15 |
| KXG19201 | Sorghum | plastid | 42.79 | 39.01 |
| TraesCS1A01G046000.1 | Wheat | extracellular, vacuole | 30.26 | 35.26 |
| Solyc07g049370.2.1 | Tomato | extracellular, vacuole | 38.3 | 34.62 |
| Solyc12g040860.1.1 | Tomato | extracellular, plasma membrane, vacuole | 36.88 | 34.21 |
| Solyc04g080260.2.1 | Tomato | extracellular | 35.22 | 33.79 |
| Solyc06g076170.2.1 | Tomato | extracellular | 34.75 | 32.74 |
| Solyc01g109570.2.1 | Tomato | extracellular | 36.41 | 32.56 |
| Solyc12g014420.1.1 | Tomato | extracellular | 36.64 | 32.29 |
| Solyc07g005330.2.1 | Tomato | extracellular | 32.39 | 29.85 |
| Solyc09g057630.2.1 | Tomato | nucleus | 31.68 | 28.88 |
| Solyc12g008580.1.1 | Tomato | extracellular | 33.33 | 28.43 |
| Solyc12g098560.1.1 | Tomato | extracellular | 29.79 | 27.45 |
| Solyc04g007910.2.1 | Tomato | extracellular | 31.68 | 26.53 |
| Solyc05g054440.2.1 | Tomato | unclear | 32.62 | 26.24 |
| Solyc08g005000.2.1 | Tomato | extracellular | 25.53 | 24.66 |
| Solyc02g080660.2.1 | Tomato | golgi, plasma membrane, vacuole | 20.57 | 21.07 |
| OQU92921 | Sorghum | mitochondrion | 45.39 | 17.55 |
Protein Annotations
| KEGG:00500+3.2.1.39 | Gene3D:3.20.20.80 | MapMan:50.3.2 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005975 |
| GO:GO:0007154 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009505 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016787 | GO:GO:0030246 | GO:GO:0030247 | GO:GO:0030312 | GO:GO:0042973 | GO:GO:0046658 |
| InterPro:Glyco_hydro_17 | InterPro:Glycoside_hydrolase_SF | UniProt:K4CPX5 | PFAM:PF00332 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF236 |
| SUPFAM:SSF51445 | SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc08g083310.2 | EnsemblPlants:Solyc08g083310.2.1 | TMHMM:TMhelix | UniParc:UPI000276ACF4 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr8:-:65813638..65815391
Molecular Weight (calculated)
45501.5 Da
IEP (calculated)
8.039
GRAVY (calculated)
0.026
Length
423 amino acids
Sequence
(BLAST)
(BLAST)
001: MESNPNPISS SLLLFLLFFT PTMVAPLGIN YGQIANNLPL PENVVPLVKS IGATRIKLYD ADPHVLKAFA NTGVEFIVSL GNEYLAKMKD PSKAQSWVKN
101: NVQPYLPATK ITCIAVGNEV LTFNDTILTD NLLPAMQSVH TALVNLKLDK QVTVTTAHSL AILQTSYPPS AGAFRRDLVN CVTRIVDFHC KTGSPFLINA
201: YPYFAYKGNP KQVSLDFVLF QPNSGIVDPQ SNLHYDNMLF AQIDAVHSAL ASIGYKNVCV QISETGWPSK GDADEAGATP ENARKYNCNL MKLIGQKKGT
301: PMRPNSDLNI YVFALFNENL KPGPSSERNY GLFKPDGSQA YPLGVPAINA ASTNSSSSGG SGSTPSASVP LPPASSSSGY LAITSDSVKS LSTVQLLYLA
401: PFISLAHFVS FGYTTCNTNV CIL
101: NVQPYLPATK ITCIAVGNEV LTFNDTILTD NLLPAMQSVH TALVNLKLDK QVTVTTAHSL AILQTSYPPS AGAFRRDLVN CVTRIVDFHC KTGSPFLINA
201: YPYFAYKGNP KQVSLDFVLF QPNSGIVDPQ SNLHYDNMLF AQIDAVHSAL ASIGYKNVCV QISETGWPSK GDADEAGATP ENARKYNCNL MKLIGQKKGT
301: PMRPNSDLNI YVFALFNENL KPGPSSERNY GLFKPDGSQA YPLGVPAINA ASTNSSSSGG SGSTPSASVP LPPASSSSGY LAITSDSVKS LSTVQLLYLA
401: PFISLAHFVS FGYTTCNTNV CIL
001: MELTSFHRSS LLFLISLTLI ILPTTTTSIG VNYGQIGDNL PSPTDVIPLI KSIGATKVKL YDANPQILKA FSNTGIEFII GLGNEYLSKM KDPSKALTWI
101: KQNVTPFLPA TNITCITIGN EILALNDSSL TTNLLPAMQG VHSALITAGL SDQISVTTAH SLSILKSSFP PSAGEFQPDL LDSLTPILEF HRKTDSPFLI
201: NAYPFFAYKG NPKEVPLDFV LFQPNQGIVD PATGFHYDNM LFAQIDAVYS ALAAAGFKSL RVEISETGWP SKGDDDEVGA TPENAKRYNG NLIKMMMSGK
301: KTKTPLKPNN DLSIYVFALF NENLKPGPTS ERNYGLFKPD GTQAYSLGFA LNDVVRGASG GGTGGGNSSS GGGRDKSPVF PVSPVAPDSA STGYLAISAS
401: PVTGKRKGKG AILSLVVSML LARHLL
101: KQNVTPFLPA TNITCITIGN EILALNDSSL TTNLLPAMQG VHSALITAGL SDQISVTTAH SLSILKSSFP PSAGEFQPDL LDSLTPILEF HRKTDSPFLI
201: NAYPFFAYKG NPKEVPLDFV LFQPNQGIVD PATGFHYDNM LFAQIDAVYS ALAAAGFKSL RVEISETGWP SKGDDDEVGA TPENAKRYNG NLIKMMMSGK
301: KTKTPLKPNN DLSIYVFALF NENLKPGPTS ERNYGLFKPD GTQAYSLGFA LNDVVRGASG GGTGGGNSSS GGGRDKSPVF PVSPVAPDSA STGYLAISAS
401: PVTGKRKGKG AILSLVVSML LARHLL
Arabidopsis Description
Glucan endo-1,3-beta-glucosidase 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8L868]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.