Factsheet for Solyc03g082900.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
golgi 5
plasma membrane 5
endoplasmic reticulum 5
vacuole 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400047660	Potato	extracellular	97.09	96.07
KRH52523	Soybean	extracellular, plasma membrane, vacuole	54.23	59.25
VIT_16s0098g01560.t01	Wine grape	extracellular	69.31	56.83
Bra036510.1-P	Field mustard	cytoskeleton, extracellular, plastid, vacuole	59.79	50.33
AT5G24318.1	Thale cress	extracellular	60.58	50.0
CDX87130	Canola	vacuole	60.05	48.82
CDY19838	Canola	extracellular, vacuole	59.79	48.39
Solyc06g076170.2.1	Tomato	extracellular	53.17	44.77
Zm00001d001791_P001	Maize	endoplasmic reticulum, extracellular, vacuole	49.21	41.33
EES13119	Sorghum	extracellular, vacuole	49.74	40.52
TraesCS2B01G459400.1	Wheat	extracellular	49.21	40.43
TraesCS2A01G439500.1	Wheat	extracellular	49.21	40.43
TraesCS2D01G436800.1	Wheat	vacuole	41.8	40.1
Os04t0681950-00	Rice	vacuole	47.62	39.91
HORVU2Hr1G102010.1	Barley	golgi, mitochondrion, vacuole	36.77	39.49
Solyc11g068440.1.1	Tomato	extracellular	39.42	39.21
Solyc02g070450.1.1	Tomato	endoplasmic reticulum, extracellular, vacuole	41.01	38.85
Solyc07g005330.2.1	Tomato	extracellular	46.3	38.13
Solyc12g055840.1.1	Tomato	nucleus	41.27	36.97
GSMUA_Achr3P14330_001	Banana	cytosol, plasma membrane, vacuole	48.94	36.63
Solyc04g080260.2.1	Tomato	extracellular	42.59	36.51
Solyc01g109570.2.1	Tomato	extracellular	44.18	35.31
Solyc11g071520.1.1	Tomato	extracellular	35.71	35.25
Solyc08g083310.2.1	Tomato	nucleus	39.15	34.99
Solyc07g049370.2.1	Tomato	extracellular, vacuole	41.8	33.76
Solyc07g008150.2.1	Tomato	extracellular, vacuole	34.39	33.33
Solyc05g054440.2.1	Tomato	unclear	46.03	33.08
Solyc12g040860.1.1	Tomato	extracellular, plasma membrane, vacuole	38.89	32.24
Solyc06g073710.2.1	Tomato	golgi, mitochondrion, plastid, vacuole	34.66	31.8
Solyc12g098560.1.1	Tomato	extracellular	37.57	30.94
Solyc12g014420.1.1	Tomato	extracellular	38.62	30.42
Solyc09g057630.2.1	Tomato	nucleus	35.71	29.09
Solyc12g008580.1.1	Tomato	extracellular	38.1	29.03
Solyc04g007910.2.1	Tomato	extracellular	38.62	28.91
Solyc08g005000.2.1	Tomato	extracellular	30.42	26.26
Solyc02g080660.2.1	Tomato	golgi, plasma membrane, vacuole	24.07	22.03

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:3.20.20.80	MapMan:50.3.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016787	GO:GO:0016798	GO:GO:0030246	GO:GO:0030247
GO:GO:0046658	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	UniProt:K4BI66	PFAM:PF00332	ScanProsite:PS00587
PANTHER:PTHR32227	PANTHER:PTHR32227:SF62	SUPFAM:SSF51445	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc03g082900.2	EnsemblPlants:Solyc03g082900.2.1
TMHMM:TMhelix	UniParc:UPI0002768763	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3:+:52788024..52789291

Molecular Weight (calculated)

41683.6 Da

IEP (calculated)

5.002

GRAVY (calculated)

0.226

Length

378 amino acids

Sequence
(BLAST)

001: MDKVFNTPLA HLLGALLVLL APIFLQGVEG TIGVNYGTVA DNLPPPVQVA SFLRESTFIR RVRLFDANPE ILKAFANTGI SVTVNVPNDL IPQLTMLSFA
101: QQWVEINVLP YVPATNIVRI LVGNEVISTA NKLLIVSLVP AMETLHAVLV EKSLDRHIQI STPHFLGILS NSSPPSTGKF RPGYDIHVLK PLLDFLRATN
201: SPFMVNPYPF FDSSDNTLDY ALFRPNSGVF DETTQLTYTN MLDAQLDAVF SALKLLDFED IEIVIAETGW PSRGDPGQAG VDTGIAAEYN RKLIQHVMSG
301: IGTPLMPNRT FETYIFALFN EDLKPGPTCE RNFGLFKPDM TPVYDIGILH PRVANAAANT DHSRTNLLLL LLVCLMCF

Best Arabidopsis Sequence Match ( AT5G24318.4 )
(BLAST)

001: MNYVLPFFSL SMFTIVGVLL ILSTGSEASI GVNYGTLANN LPPPQQVAEF LLHSTVINRI RLFDTDPQIL QAFANTGIAV TVTVPNDQIP HLTNLSSAKQ
101: WISDHIQPHF PSTNIIRILV GNEVISTADH LLIRTLIPAM QSLHTALVSA SLHRRIQIST PHSLGTLTNS TPPSSAKFRR GYDAQVLKPL LSFLRSTSSP
201: FVVNPYPFFG YSIETLDFAL FRPNPGLFDQ HTKLLYTNML DAQLDSVYSA MDKLGFSDVE IVIGEIGWPS EGDIDQIGVD VDTAAEFNKN LIARVDSGTG
301: TPLMPNRTFE TYIFALFNEN LKSGPTSERN FGIFRSDLTP IYDIGILRPT VINHRRNSQH YLVSYMLTNL FL

Arabidopsis Description

O-Glycosyl hydrolases family 17 protein [Source:UniProtKB/TrEMBL;Acc:F4KH28]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.