Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 7
- golgi 5
- plasma membrane 5
- endoplasmic reticulum 6
- vacuole 6
- peroxisome 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400012898 | Potato | cytosol | 85.78 | 88.08 |
| Solyc08g083310.2.1 | Tomato | nucleus | 72.75 | 72.58 |
| VIT_02s0025g02770.t01 | Wine grape | extracellular | 62.56 | 65.19 |
| KRH34248 | Soybean | extracellular, plasma membrane, vacuole | 58.77 | 59.9 |
| Bra023293.1-P | Field mustard | extracellular | 55.69 | 56.76 |
| CDY69080 | Canola | extracellular | 56.16 | 56.7 |
| CDX93815 | Canola | extracellular | 55.45 | 56.52 |
| CDY13362 | Canola | extracellular, vacuole | 54.5 | 55.56 |
| AT5G42100.1 | Thale cress | extracellular, vacuole | 55.45 | 55.06 |
| AT1G32860.1 | Thale cress | extracellular, plasma membrane, vacuole | 55.45 | 54.93 |
| CDX67530 | Canola | extracellular | 54.74 | 54.1 |
| Bra028526.1-P | Field mustard | extracellular, vacuole | 54.98 | 53.95 |
| Solyc11g068440.1.1 | Tomato | extracellular | 47.16 | 52.37 |
| TraesCS1A01G055900.1 | Wheat | extracellular | 32.23 | 47.06 |
| Zm00001d028410_P001 | Maize | vacuole | 40.05 | 46.81 |
| Zm00001d030361_P001 | Maize | plasma membrane | 43.36 | 45.3 |
| TraesCS1A01G049800.1 | Wheat | extracellular, vacuole | 43.13 | 44.83 |
| TraesCS4A01G067900.1 | Wheat | vacuole | 44.08 | 44.5 |
| Os10t0160100-01 | Rice | extracellular, vacuole | 44.08 | 44.29 |
| TraesCS4D01G225700.1 | Wheat | vacuole | 43.84 | 44.26 |
| TraesCS4B01G225100.1 | Wheat | vacuole | 43.84 | 44.26 |
| TraesCS1D01G056500.1 | Wheat | extracellular, vacuole | 42.42 | 44.2 |
| TraesCS1B01G072500.1 | Wheat | extracellular, vacuole | 42.42 | 44.09 |
| HORVU1Hr1G010910.2 | Barley | extracellular, vacuole | 42.89 | 43.93 |
| TraesCS7A01G069700.1 | Wheat | extracellular, vacuole | 44.55 | 43.82 |
| TraesCS1B01G072600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 41.71 | 43.67 |
| Solyc02g070450.1.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 41.23 | 43.61 |
| TraesCS7D01G065400.1 | Wheat | extracellular, vacuole | 44.31 | 43.59 |
| HORVU4Hr1G063240.7 | Barley | golgi, vacuole | 44.55 | 43.42 |
| TraesCSU01G153100.1 | Wheat | extracellular, vacuole | 43.84 | 43.12 |
| Solyc11g071520.1.1 | Tomato | extracellular | 38.86 | 42.82 |
| Os03t0246100-01 | Rice | extracellular, vacuole | 43.6 | 42.79 |
| Zm00001d036051_P001 | Maize | extracellular, vacuole | 42.65 | 42.25 |
| KXG38664 | Sorghum | extracellular, vacuole | 43.13 | 41.94 |
| Os06t0131500-01 | Rice | plastid | 44.55 | 41.87 |
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane, vacuole | 39.1 | 41.67 |
| HORVU1Hr1G011210.1 | Barley | vacuole | 42.42 | 41.63 |
| Solyc03g082900.2.1 | Tomato | extracellular | 36.97 | 41.27 |
| Solyc07g008150.2.1 | Tomato | extracellular, vacuole | 37.2 | 40.26 |
| KXG19201 | Sorghum | plastid | 43.84 | 39.87 |
| Solyc06g073710.2.1 | Tomato | golgi, mitochondrion, plastid, vacuole | 38.63 | 39.56 |
| HORVU7Hr1G012550.1 | Barley | vacuole | 41.71 | 39.37 |
| TraesCS1A01G046000.1 | Wheat | extracellular, vacuole | 30.81 | 35.81 |
| Solyc04g080260.2.1 | Tomato | extracellular | 36.49 | 34.92 |
| Solyc01g109570.2.1 | Tomato | extracellular | 38.39 | 34.25 |
| Solyc07g049370.2.1 | Tomato | extracellular, vacuole | 37.2 | 33.55 |
| Solyc12g014420.1.1 | Tomato | extracellular | 37.2 | 32.71 |
| Solyc12g040860.1.1 | Tomato | extracellular, plasma membrane, vacuole | 35.31 | 32.68 |
| Solyc06g076170.2.1 | Tomato | extracellular | 34.6 | 32.52 |
| Solyc12g008580.1.1 | Tomato | extracellular | 34.12 | 29.03 |
| Solyc07g005330.2.1 | Tomato | extracellular | 31.52 | 28.98 |
| Solyc12g098560.1.1 | Tomato | extracellular | 31.04 | 28.54 |
| Solyc09g057630.2.1 | Tomato | nucleus | 30.81 | 28.02 |
| Solyc04g007910.2.1 | Tomato | extracellular | 32.46 | 27.13 |
| Solyc08g005000.2.1 | Tomato | extracellular | 27.49 | 26.48 |
| Solyc05g054440.2.1 | Tomato | unclear | 31.04 | 24.9 |
| Solyc02g080660.2.1 | Tomato | golgi, plasma membrane, vacuole | 20.62 | 21.07 |
| OQU92921 | Sorghum | mitochondrion | 44.31 | 17.09 |
Protein Annotations
| KEGG:00500+3.2.1.39 | Gene3D:3.20.20.80 | MapMan:50.3.2 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005975 |
| GO:GO:0007154 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009505 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016787 | GO:GO:0030246 | GO:GO:0030247 | GO:GO:0030312 | GO:GO:0042973 | GO:GO:0046658 |
| InterPro:Glyco_hydro_17 | InterPro:Glycoside_hydrolase_SF | UniProt:K4DFR5 | PFAM:PF00332 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF236 |
| SUPFAM:SSF51445 | SignalP:SignalP-TM | EnsemblPlantsGene:Solyc12g055840.1 | EnsemblPlants:Solyc12g055840.1.1 | TMHMM:TMhelix | UniParc:UPI0002769D1B |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr12:+:61841459..61842844
Molecular Weight (calculated)
45546.3 Da
IEP (calculated)
7.000
GRAVY (calculated)
0.006
Length
422 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTMDSIINI LYASLILVFL FSTVMATSIG INYGQIADNL PPPEKVVPLV KSMGANRVKL YDADPHVLKA FANSGVEFIV SLGNEYLSDM KDPAKAQAWV
101: KTNVQAYLPA TKITCIAVGN EVLTFNNTAL SDNLLPAMEN VYAALVSMNL DKQVSVTTAH SVAILETSYP PSSGAFRRDL VSCVTQVVDF HCKTGSPFLI
201: NAYPYFAYKA DPKQVQLDFV LFQPNQGIVD PVTNLHYDNM LFAQIDAVHS ALASIGYKNV CVQISETGWP SKGDADELGA TPDNARKYNC NLIKLVSQKK
301: GTPLKPNSNL NIYVFALFNE NLKPGPMSER NYGLFKPDGT PSYPLGFSGI NSGGSTNSSS GNRPATGGGS STPASWSPQD GSSSSGYMSI TSNSGRVLFC
401: WKSWILQLYI TVGSISVLFS QL
101: KTNVQAYLPA TKITCIAVGN EVLTFNNTAL SDNLLPAMEN VYAALVSMNL DKQVSVTTAH SVAILETSYP PSSGAFRRDL VSCVTQVVDF HCKTGSPFLI
201: NAYPYFAYKA DPKQVQLDFV LFQPNQGIVD PVTNLHYDNM LFAQIDAVHS ALASIGYKNV CVQISETGWP SKGDADELGA TPDNARKYNC NLIKLVSQKK
301: GTPLKPNSNL NIYVFALFNE NLKPGPMSER NYGLFKPDGT PSYPLGFSGI NSGGSTNSSS GNRPATGGGS STPASWSPQD GSSSSGYMSI TSNSGRVLFC
401: WKSWILQLYI TVGSISVLFS QL
001: MELTSFHRSS LLFLISLTLI ILPTTTTSIG VNYGQIGDNL PSPTDVIPLI KSIGATKVKL YDANPQILKA FSNTGIEFII GLGNEYLSKM KDPSKALTWI
101: KQNVTPFLPA TNITCITIGN EILALNDSSL TTNLLPAMQG VHSALITAGL SDQISVTTAH SLSILKSSFP PSAGEFQPDL LDSLTPILEF HRKTDSPFLI
201: NAYPFFAYKG NPKEVPLDFV LFQPNQGIVD PATGFHYDNM LFAQIDAVYS ALAAAGFKSL RVEISETGWP SKGDDDEVGA TPENAKRYNG NLIKMMMSGK
301: KTKTPLKPNN DLSIYVFALF NENLKPGPTS ERNYGLFKPD GTQAYSLGFA LNDVVRGASG GGTGGGNSSS GGGRDKSPVF PVSPVAPDSA STGYLAISAS
401: PVTGKRKGKG AILSLVVSML LARHLL
101: KQNVTPFLPA TNITCITIGN EILALNDSSL TTNLLPAMQG VHSALITAGL SDQISVTTAH SLSILKSSFP PSAGEFQPDL LDSLTPILEF HRKTDSPFLI
201: NAYPFFAYKG NPKEVPLDFV LFQPNQGIVD PATGFHYDNM LFAQIDAVYS ALAAAGFKSL RVEISETGWP SKGDDDEVGA TPENAKRYNG NLIKMMMSGK
301: KTKTPLKPNN DLSIYVFALF NENLKPGPTS ERNYGLFKPD GTQAYSLGFA LNDVVRGASG GGTGGGNSSS GGGRDKSPVF PVSPVAPDSA STGYLAISAS
401: PVTGKRKGKG AILSLVVSML LARHLL
Arabidopsis Description
Glucan endo-1,3-beta-glucosidase 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8L868]
SUBAcon: [extracellular,plasma membrane,vacuole]
SUBAcon: [extracellular,plasma membrane,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.