Factsheet for Solyc11g068440.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 7
plasma membrane 6
golgi 5
plastid 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol, nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

extracellular: 22364583

msms PMID: 22364583 doi

P Shah, AL Powell, R Orlando, C Bergmann, G Gutierrez-Sanchez

Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400067771	Potato	extracellular, plasma membrane, vacuole	97.37	96.61
KRH22675	Soybean	vacuole	68.42	66.33
KRH25239	Soybean	extracellular, plasma membrane, vacuole	66.32	64.29
KRH30421	Soybean	extracellular, plasma membrane, vacuole	65.0	62.85
CDY04498	Canola	extracellular, vacuole	61.84	60.88
VIT_06s0080g00420.t01	Wine grape	extracellular, mitochondrion, plastid, vacuole	64.47	59.76
KRH26646	Soybean	extracellular, plasma membrane, vacuole	67.11	59.72
AT2G27500.1	Thale cress	vacuole	60.79	58.93
TraesCS2D01G292500.1	Wheat	extracellular, plasma membrane, vacuole	60.26	58.72
CDX83270	Canola	extracellular, vacuole	60.0	58.46
CDY31181	Canola	extracellular, vacuole	60.0	58.46
GSMUA_Achr11P...	Banana	vacuole	59.21	58.44
Bra000508.1-P	Field mustard	extracellular, vacuole	59.74	58.21
TraesCS2B01G311200.1	Wheat	extracellular, plasma membrane, vacuole	59.74	58.06
TraesCS2A01G294700.1	Wheat	plasma membrane	59.21	57.69
Os01t0860800-01	Rice	extracellular	59.47	56.78
GSMUA_Achr6P13230_001	Banana	vacuole	50.0	56.55
TraesCS3B01G278400.1	Wheat	extracellular, vacuole	57.89	56.27
TraesCS3A01G249500.1	Wheat	vacuole	58.16	56.09
Bra012015.1-P	Field mustard	plasma membrane, vacuole	61.32	55.88
Os04t0412300-01	Rice	plasma membrane, plastid, vacuole	59.47	55.53
Os02t0532900-01	Rice	endoplasmic reticulum, extracellular	57.11	55.5
Zm00001d003784_P001	Maize	endoplasmic reticulum, extracellular, vacuole	57.63	55.44
EES18301	Sorghum	golgi, plasma membrane, vacuole	59.74	55.37
EES10741	Sorghum	golgi, plasma membrane, vacuole	59.21	54.88
TraesCS3D01G366700.2	Wheat	endoplasmic reticulum, vacuole	58.16	54.57
EES01795	Sorghum	extracellular, plasma membrane, vacuole	58.16	54.17
Zm00001d010137_P001	Maize	extracellular	57.63	54.07
TraesCS3A01G374000.2	Wheat	endoplasmic reticulum, extracellular	57.89	53.92
TraesCS3B01G406200.2	Wheat	extracellular, plasma membrane, vacuole	57.63	53.68
EES05179	Sorghum	plastid	57.37	53.3
HORVU3Hr1G084170.1	Barley	extracellular, vacuole	57.63	53.28
Zm00001d000117_P001	Maize	plastid, vacuole	55.26	52.9
HORVU3Hr1G067280.5	Barley	plasma membrane	59.21	52.82
Zm00001d042767_P001	Maize	plasma membrane	57.11	52.42
TraesCS1D01G275700.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	56.05	52.33
CDX71449	Canola	plasma membrane, vacuole	62.11	51.98
TraesCS1B01G285400.2	Wheat	mitochondrion, plasma membrane, plastid, vacuole	56.05	51.82
TraesCS3D01G249500.1	Wheat	vacuole	57.63	50.93
TraesCS1A01G276200.1	Wheat	vacuole	54.47	50.49
Solyc08g083310.2.1	Tomato	nucleus	52.89	47.52
Zm00001d012292_P001	Maize	mitochondrion	53.16	47.42
HORVU1Hr1G073820.3	Barley	mitochondrion, peroxisome, plastid, vacuole	56.58	47.25
Solyc12g055840.1.1	Tomato	nucleus	52.37	47.16
Solyc02g070450.1.1	Tomato	endoplasmic reticulum, extracellular, vacuole	47.89	45.61
GSMUA_Achr10P...	Banana	mitochondrion	42.11	42.78
HORVU2Hr1G072890.1	Barley	mitochondrion	59.74	42.51
Solyc11g071520.1.1	Tomato	extracellular	41.32	40.99
Solyc03g082900.2.1	Tomato	extracellular	39.21	39.42
Solyc06g073710.2.1	Tomato	golgi, mitochondrion, plastid, vacuole	40.53	37.38
Solyc07g008150.2.1	Tomato	extracellular, vacuole	38.16	37.18
Solyc04g080260.2.1	Tomato	extracellular	41.32	35.6
Solyc12g014420.1.1	Tomato	extracellular	44.47	35.21
Solyc12g040860.1.1	Tomato	extracellular, plasma membrane, vacuole	40.79	33.99
Solyc06g076170.2.1	Tomato	extracellular	40.0	33.85
Solyc07g049370.2.1	Tomato	extracellular, vacuole	40.26	32.69
Solyc01g109570.2.1	Tomato	extracellular	39.74	31.92
Solyc07g005330.2.1	Tomato	extracellular	36.32	30.07
Solyc12g008580.1.1	Tomato	extracellular	39.21	30.04
Solyc09g057630.2.1	Tomato	nucleus	35.26	28.88
Solyc12g098560.1.1	Tomato	extracellular	33.95	28.1
Solyc05g054440.2.1	Tomato	unclear	36.84	26.62
Solyc04g007910.2.1	Tomato	extracellular	32.11	24.16
Solyc08g005000.2.1	Tomato	extracellular	26.84	23.29
Solyc02g080660.2.1	Tomato	golgi, plasma membrane, vacuole	24.21	22.28

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:3.20.20.80	MapMan:50.3.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005886	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0030246	GO:GO:0030247	GO:GO:0046658	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF
UniProt:K4DA02	PFAM:PF00332	PANTHER:PTHR32227	PANTHER:PTHR32227:SF236	SUPFAM:SSF51445	SignalP:SignalP-noTM
EnsemblPlantsGene:Solyc11g068440.1	EnsemblPlants:Solyc11g068440.1.1	TMHMM:TMhelix	UniParc:UPI000276A486	SEG:seg	:

Description

No Description!

Coordinates

chr11:+:53170046..53173336

Molecular Weight (calculated)

42562.1 Da

IEP (calculated)

6.512

GRAVY (calculated)

-0.056

Length

380 amino acids

Sequence
(BLAST)

001: MAILFFKALP LLLLLSFTDL FASTLSLGIG INYGQIANNL PTPSRVSFLL RSLNVTRVKL YDADPNVLTA FANTNVEFVI GLGNEYLQRM SDPQQAQAWI
101: QQHVQPYHTQ TKITCITVGN EVLTGTDTQL KSYLLPAMQG VYRALVNLGL SNEIYVAHPH SAGILENSFP PSSCSFRQDL SEYIHGMLNF HVQTKSPFLI
201: NFYPFFAYKD KPNEVPLDYV LFQPNQGTTD PITNLKYDNM LYAQIDAVYS AIKAMGHTDI PVKVSETGWP SKGDPNEFGA TPENAALYNG NLFQRMQQNQ
301: GTPAKPSEPI DVYVFALFNE NLKPGPASER NYGLYYPDGT PVYNIGLRGF LPRMDYSAAK KNAFFISAFL LLMMIFLIHF

Best Arabidopsis Sequence Match ( AT2G27500.2 )
(BLAST)

001: MATHSLSFFF RVLLLLFLTL SERIKGQGVG INYGQIANNL PSPARVAVLL RSLNITRVKL YDADPNVLFS FSNSQVDFMI GLGNEYLQNM STDPTKAQDW
101: LQQRLEPHIS KTRITSIVVG NEIFKTNDHV LIQSLLPAMK SVYAALTNLG LEKQVTVTSA HSLDILSTSY PPSSGSFKEE FIQYLQPLLD FHSQIESPFL
201: INAYPFFAYK DSPKEVPLEY VLFQPNQGMV DPNTNLHYDN MLFAQVDALY SAIKTLGHTD IEVRISETGW PSKGDENEIG ASPENAALYN GNLLKLIQQR
301: KGTPAKQSVP IDVYVFALFN ENLKPGPVSE RNYGLFYPDG KPVYNVGMQG YLPDIIYTSR ATTIKVNSSF HFLYLHF

Arabidopsis Description

Glucan endo-1,3-beta-glucosidase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQG9]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.