Factsheet for TraesCS3B01G278400.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G249500.1	Wheat	vacuole	91.82	91.12
TraesCS3D01G249500.1	Wheat	vacuole	95.4	86.74
HORVU3Hr1G067280.5	Barley	plasma membrane	91.05	83.57
Os02t0532900-01	Rice	endoplasmic reticulum, extracellular	79.28	79.28
EES05179	Sorghum	plastid	78.01	74.57
Zm00001d000117_P001	Maize	plastid, vacuole	74.68	73.55
TraesCS2B01G311200.1	Wheat	extracellular, plasma membrane, vacuole	72.38	72.38
PGSC0003DMT400067771	Potato	extracellular, plasma membrane, vacuole	56.78	57.96
Solyc11g068440.1.1	Tomato	extracellular	56.27	57.89
KRH22675	Soybean	vacuole	56.78	56.63
CDY04498	Canola	extracellular, vacuole	55.75	56.48
Bra000508.1-P	Field mustard	extracellular, vacuole	56.27	56.41
CDX83270	Canola	extracellular, vacuole	56.27	56.41
AT2G27500.1	Thale cress	vacuole	56.52	56.38
CDY31181	Canola	extracellular, vacuole	55.75	55.9
GSMUA_Achr6P13230_001	Banana	vacuole	47.83	55.65
KRH25239	Soybean	extracellular, plasma membrane, vacuole	54.22	54.08
KRH30421	Soybean	extracellular, plasma membrane, vacuole	53.45	53.18
TraesCS3B01G406200.2	Wheat	extracellular, plasma membrane, vacuole	54.73	52.45
Bra012015.1-P	Field mustard	plasma membrane, vacuole	55.5	52.04
VIT_06s0080g00420.t01	Wine grape	extracellular, mitochondrion, plastid, vacuole	53.2	50.73
KRH26646	Soybean	extracellular, plasma membrane, vacuole	55.24	50.59
TraesCS1B01G285400.2	Wheat	mitochondrion, plasma membrane, plastid, vacuole	51.66	49.15
CDX71449	Canola	plasma membrane, vacuole	56.27	48.46
TraesCS7B01G233500.1	Wheat	extracellular	45.78	44.2
GSMUA_Achr10P...	Banana	mitochondrion	41.43	43.32
TraesCS1B01G072500.1	Wheat	extracellular, vacuole	43.73	42.12
TraesCS1B01G072600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	42.97	41.69
TraesCS4B01G225100.1	Wheat	vacuole	43.99	41.15
TraesCS7B01G279900.1	Wheat	golgi, vacuole	39.13	38.35
TraesCS6B01G188000.1	Wheat	plastid	40.15	35.52
TraesCS4B01G053700.2	Wheat	vacuole	37.08	34.69
TraesCS4B01G020100.1	Wheat	extracellular	40.66	34.34
TraesCS6B01G355600.1	Wheat	vacuole	40.15	32.85
TraesCS1B01G454200.1	Wheat	extracellular, vacuole	33.25	32.42
TraesCS2B01G459400.1	Wheat	extracellular	38.11	32.39
TraesCS4B01G142000.1	Wheat	golgi	38.11	32.25
TraesCS4B01G233900.2	Wheat	plasma membrane, plastid, vacuole	34.27	29.07
TraesCS5B01G329800.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	34.78	27.76
TraesCS7B01G153600.1	Wheat	vacuole	34.53	27.38
TraesCS3B01G311300.2	Wheat	vacuole	36.32	26.74
TraesCS4B01G242300.1	Wheat	extracellular	33.76	26.4
TraesCS7B01G285700.2	Wheat	extracellular	36.32	25.4
TraesCS2B01G274900.1	Wheat	plasma membrane	33.76	24.81
TraesCS5B01G279000.2	Wheat	extracellular	35.29	24.78
TraesCS2B01G241200.3	Wheat	endoplasmic reticulum, extracellular, vacuole	35.04	24.46
TraesCS2B01G241300.1	Wheat	extracellular, vacuole	33.76	23.96
TraesCS2B01G220300.1	Wheat	plasma membrane	29.41	23.33
TraesCS5B01G153900.1	Wheat	plasma membrane	28.9	22.74
TraesCS1B01G454500.1	Wheat	vacuole	32.48	22.64
TraesCS1B01G453900.1	Wheat	vacuole	32.99	22.59

Protein Annotations

EnsemblPlants:TraesCS3B01G278400.1	EnsemblPlantsGene:TraesCS3B01G278400	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF
KEGG:00500+3.2.1.39	PANTHER:PTHR32227	PANTHER:PTHR32227:SF233	PFAM:PF00332	SEG:seg	SUPFAM:SSF51445
TMHMM:TMhelix	MapMan:50.3.2	:	:	:	:

Description

No Description!

Coordinates

chr3B:-:448576863..448579349

Molecular Weight (calculated)

41706.2 Da

IEP (calculated)

7.844

GRAVY (calculated)

0.133

Length

391 amino acids

Sequence
(BLAST)

001: MAAAREASRA ASPVAAAAGV LLVLAVLLTE HVIVANALSI GVNYGQIANN LPAPGRVSTL LRSIKISKVK LYDADPHVLR AFLGTGVEFV IGIGNEHVPA
101: MVSSTVAQAW LQQHVVPHLH AGARITCITV GNEAFKGNDT VLQASLLPAM HSVHQALGAL GLQGRVNVTT AHSLDIMGVS YPPSAGTFAP GAVSHLQPFL
201: KFLSATRAPF LINCYPFFAY KDDPARVPLD YVLFQPNAGV TDPNTGLNYD NMLYAQVDAV YSAIKALGHT DVDVKVSETG WPSRGDPDEI GATPQHAGTY
301: IGNLLRRIEM KQGTPLRPAV PIDVYVFALF NENLKPGPAS ERNYGLFYPD GTPVYNVGLR GYLPPMADSH GARQVRLLDS LARSAHAYAF T

Best Arabidopsis Sequence Match ( AT1G32860.1 )
(BLAST)

001: MELTSFHRSS LLFLISLTLI ILPTTTTSIG VNYGQIGDNL PSPTDVIPLI KSIGATKVKL YDANPQILKA FSNTGIEFII GLGNEYLSKM KDPSKALTWI
101: KQNVTPFLPA TNITCITIGN EILALNDSSL TTNLLPAMQG VHSALITAGL SDQISVTTAH SLSILKSSFP PSAGEFQPDL LDSLTPILEF HRKTDSPFLI
201: NAYPFFAYKG NPKEVPLDFV LFQPNQGIVD PATGFHYDNM LFAQIDAVYS ALAAAGFKSL RVEISETGWP SKGDDDEVGA TPENAKRYNG NLIKMMMSGK
301: KTKTPLKPNN DLSIYVFALF NENLKPGPTS ERNYGLFKPD GTQAYSLGFA LNDVVRGASG GGTGGGNSSS GGGRDKSPVF PVSPVAPDSA STGYLAISAS
401: PVTGKRKGKG AILSLVVSML LARHLL

Arabidopsis Description

Glucan endo-1,3-beta-glucosidase 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8L868]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.