Factsheet for Solyc06g073710.2.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plastid, vacuole, mitochondrion

Predictor Summary:

plastid 2
mitochondrion 3
vacuole 1
extracellular 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400015234	Potato	cytosol, peroxisome, plastid	86.17	95.69
KRH09724	Soybean	extracellular, plasma membrane, vacuole	64.08	68.39
KRH23581	Soybean	extracellular, vacuole	58.01	66.57
VIT_09s0002g06880.t01	Wine grape	vacuole	64.08	66.17
KRH47445	Soybean	extracellular, vacuole	62.62	66.15
KRH44462	Soybean	extracellular, vacuole	62.38	66.07
Solyc11g071520.1.1	Tomato	extracellular	61.16	65.8
Bra021137.1-P	Field mustard	plasma membrane	59.47	63.47
CDY21869	Canola	plasma membrane	59.71	62.92
CDY20153	Canola	plasma membrane	59.71	62.92
AT3G15800.1	Thale cress	golgi, plastid, vacuole	58.98	60.9
Solyc07g008150.2.1	Tomato	extracellular, vacuole	51.46	54.36
CDY30112	Canola	cytosol	52.67	51.3
CDX97707	Canola	plastid	55.58	41.71
Solyc11g068440.1.1	Tomato	extracellular	37.38	40.53
Bra027207.1-P	Field mustard	plastid	51.7	40.34
Solyc02g070450.1.1	Tomato	endoplasmic reticulum, extracellular, vacuole	38.35	39.6
Solyc12g055840.1.1	Tomato	nucleus	39.56	38.63
Solyc08g083310.2.1	Tomato	nucleus	39.56	38.53
Solyc03g082900.2.1	Tomato	extracellular	31.8	34.66
Solyc12g014420.1.1	Tomato	extracellular	37.38	32.08
Solyc04g080260.2.1	Tomato	extracellular	33.98	31.75
Solyc07g049370.2.1	Tomato	extracellular, vacuole	35.92	31.62
Solyc12g040860.1.1	Tomato	extracellular, plasma membrane, vacuole	33.01	29.82
Solyc12g008580.1.1	Tomato	extracellular	35.68	29.64
Solyc06g076170.2.1	Tomato	extracellular	31.55	28.95
Solyc01g109570.2.1	Tomato	extracellular	32.77	28.54
Solyc09g057630.2.1	Tomato	nucleus	32.04	28.45
Solyc12g098560.1.1	Tomato	extracellular	31.07	27.89
Solyc07g005330.2.1	Tomato	extracellular	29.13	26.14
Solyc04g007910.2.1	Tomato	extracellular	31.07	25.35
Solyc08g005000.2.1	Tomato	extracellular	26.46	24.89
Solyc05g054440.2.1	Tomato	unclear	26.21	20.53
Solyc02g080660.2.1	Tomato	golgi, plasma membrane, vacuole	19.17	19.13

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:3.20.20.80	MapMan:50.3.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016787	GO:GO:0030246	GO:GO:0030247	GO:GO:0046658
InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	UniProt:K4C989	PFAM:PF00332	PANTHER:PTHR32227	PANTHER:PTHR32227:SF129
SUPFAM:SSF51445	EnsemblPlantsGene:Solyc06g073710.2	EnsemblPlants:Solyc06g073710.2.1	UniParc:UPI0002765F9F	SEG:seg	:

Description

No Description!

Coordinates

chr6:+:45472546..45474087

Molecular Weight (calculated)

46122.5 Da

IEP (calculated)

9.280

GRAVY (calculated)

-0.084

Length

412 amino acids

Sequence
(BLAST)

001: MHSTTYVRQL MLSWRLASSW PPTRPLYKRI LNGVTWIVRI HIAILVADAF TGTYGINYGR IADNIPAPES VVTLLRANKI KNVRIYDADH SVLTAFKDSE
101: IQIIIGLGNE FLKDISVNED RAVEWVKINV QPYLPGTLIR GIAVGNEVLG GGDTELWEVL VPAVKNVYNA LEKLDLSHKI EVSSPHSEAV FDNTYPPSAG
201: AFKESILPYM LPLLNFSKQI GSPFYINAYP FLAYKSDPSH IDLNYALFEK SSGIYDAKTK LHYDNMFEAM IDAAYFALEK TGFEKMAVIC SETGWASQGD
301: ENEAGANVKN ARTYNKNLHK LLLKKKGTPH RPKMVMRAYV FALFNENQKR GPTSERNFGL FKADGSIAYK IGFRGLVPSS ASKDFVLRGG FWSSQWFIAL
401: ASAVVLTQFL DL

Best Arabidopsis Sequence Match ( AT3G15800.1 )
(BLAST)

001: MGYCVPLRKS PTSHMVFSSF FLSFLLVFSI LSSQTAVAFI GTYGVNYGRI ADNLPSPDAV ATLLKSAKIR NTRIYDADHS VLTAFRGTGI EIIVGLGNEF
101: LKDISVGEDR AMNWIKENVE PFIRGGTKIS GIAVGNEILG GTDIGLWEAL LPAAKNVYSA LRRLGLHNVV EVSSPHSEAV FANSYPPSSC TFRDDVAPFM
201: KPLLAFFWQI QSPFYINAYP FLAYKSDPIT IDINYALFEH NKGILDPKTK LHYDNMFDAM VDASYAALEK AGYTKVPVIV SETGWASKGD ADEPGASVKN
301: ARTYNRNLRK RLQKRKGTPY RPDMVVRAYV FALFNENSKP GPTSERNFGL FKPDGTIAYD IGLTGLKSSS ATRYRFKSSL VSASAFTCLL LLFHRLFHL

Arabidopsis Description

Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J030]
SUBAcon: [golgi,vacuole,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.