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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • mitochondrion 2
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plasma membrane, plastid, vacuole
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:vacuole
Predotar:plastid
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra027207.1-P Field mustard plastid 92.9 96.59
CDY30112 Canola cytosol 72.5 94.09
CDY21869 Canola plasma membrane 54.1 75.96
CDY20153 Canola plasma membrane 53.92 75.7
AT3G15800.1 Thale cress golgi, plastid, vacuole 52.46 72.18
KRH09724 Soybean extracellular, plasma membrane, vacuole 44.81 63.73
KRH47445 Soybean extracellular, vacuole 45.17 63.59
PGSC0003DMT400015234 Potato cytosol, peroxisome, plastid 41.89 61.99
KRH44462 Soybean extracellular, vacuole 43.9 61.95
KRH23581 Soybean extracellular, vacuole 39.16 59.89
VIT_09s0002g06880.t01 Wine grape vacuole 42.81 58.9
Solyc06g073710.2.1 Tomato golgi, mitochondrion, plastid, vacuole 41.71 55.58
CDX83243 Canola vacuole 34.79 50.53
CDY38531 Canola golgi, vacuole 34.97 50.26
CDY63842 Canola golgi, vacuole 20.77 39.58
CDY04498 Canola extracellular, vacuole 26.23 37.31
CDX99881 Canola extracellular, vacuole 25.68 37.3
CDX83270 Canola extracellular, vacuole 26.05 36.67
CDY31181 Canola extracellular, vacuole 25.87 36.41
CDX90405 Canola vacuole 26.23 36.27
CDX90225 Canola vacuole 26.59 36.05
CDY01532 Canola vacuole 26.05 36.02
CDX99476 Canola vacuole 26.23 35.91
CDX78840 Canola vacuole 26.23 35.91
CDX76528 Canola extracellular, vacuole 25.68 35.61
CDY26296 Canola extracellular, plasma membrane, vacuole 25.68 35.34
CDX93815 Canola extracellular 26.41 35.02
CDY34065 Canola extracellular, vacuole 25.68 34.9
CDY13362 Canola extracellular, vacuole 26.23 34.78
CDY69080 Canola extracellular 26.41 34.69
CDX67530 Canola extracellular 26.59 34.19
CDY22386 Canola extracellular, vacuole 24.59 31.25
CDX71449 Canola plasma membrane, vacuole 25.68 31.06
CDX71547 Canola extracellular, vacuole 24.59 30.96
CDY17308 Canola extracellular, vacuole 24.95 30.51
CDY56498 Canola extracellular, vacuole 24.41 30.32
CDY06601 Canola endoplasmic reticulum, extracellular 24.77 30.29
CDY20780 Canola extracellular, vacuole 24.77 30.29
CDY18049 Canola extracellular, vacuole 24.23 30.09
CDY19908 Canola extracellular, vacuole 24.77 29.63
CDY46679 Canola extracellular, vacuole 23.86 29.37
CDY36734 Canola extracellular, vacuole 24.59 29.35
CDY12009 Canola extracellular, vacuole 24.41 29.13
CDX92794 Canola endoplasmic reticulum, extracellular 23.86 29.05
CDX75437 Canola extracellular, plasma membrane, vacuole 25.32 27.47
CDY28063 Canola vacuole 22.95 27.39
CDY20461 Canola extracellular 22.4 27.33
CDY45466 Canola vacuole 22.77 27.17
CDY24629 Canola vacuole 22.77 27.17
CDX69064 Canola extracellular, plasma membrane, vacuole 24.95 27.13
CDY53600 Canola extracellular 22.04 26.89
CDY26761 Canola vacuole 24.77 26.56
CDY37244 Canola vacuole 24.77 26.56
CDY08004 Canola vacuole 22.22 26.52
CDY59775 Canola extracellular, vacuole 22.77 26.37
CDY19838 Canola extracellular, vacuole 22.22 26.12
CDX87130 Canola vacuole 22.04 26.02
CDY63754 Canola extracellular, vacuole 22.59 25.94
CDY18092 Canola extracellular, vacuole 22.4 25.84
CDY53692 Canola extracellular 21.13 25.84
CDY62387 Canola extracellular 21.13 25.84
CDY50110 Canola extracellular, vacuole 22.22 25.63
CDX76097 Canola extracellular 20.95 25.5
CDY41232 Canola extracellular 20.95 25.5
CDY32869 Canola endoplasmic reticulum, extracellular, plasma membrane 23.32 25.45
CDY64970 Canola extracellular, plasma membrane, vacuole 23.32 25.45
CDY53213 Canola extracellular, vacuole 22.22 25.42
CDY09427 Canola extracellular 22.95 25.35
CDY48807 Canola extracellular 22.95 25.35
CDY67322 Canola extracellular 10.2 25.34
CDY02936 Canola extracellular 20.77 25.22
CDY40218 Canola extracellular 20.77 25.17
CDY40219 Canola extracellular 20.58 25.11
CDY41234 Canola extracellular 20.77 25.05
CDY12371 Canola extracellular, vacuole 21.49 24.63
CDY27122 Canola extracellular, vacuole 21.13 24.22
CDY58676 Canola extracellular, vacuole 22.22 24.21
CDY06469 Canola extracellular 20.95 24.01
CDY16440 Canola extracellular 22.04 24.01
CDY14214 Canola endoplasmic reticulum, extracellular, vacuole 22.4 23.98
CDY08310 Canola extracellular, vacuole 20.77 23.8
CDY12732 Canola extracellular, vacuole 20.58 23.54
CDY01191 Canola extracellular, vacuole 20.58 23.54
CDY62033 Canola extracellular, plasma membrane, vacuole 22.4 23.08
CDY68826 Canola cytosol, endoplasmic reticulum, peroxisome 17.67 22.88
CDY59252 Canola extracellular, plasma membrane, vacuole 16.58 22.3
CDY23618 Canola endoplasmic reticulum, plasma membrane, vacuole 16.76 21.85
CDY06818 Canola extracellular, plasma membrane, vacuole 19.85 21.71
CDY31214 Canola vacuole 20.4 21.46
CDX74052 Canola vacuole 22.04 21.34
CDY21013 Canola extracellular 20.04 21.19
Protein Annotations
KEGG:00500+3.2.1.39MapMan:12.5.4.3Gene3D:3.20.20.80Gene3D:3.30.890.10GO:A0A078E9K4EnsemblPlants:CDX97707
ProteinID:CDX97707ProteinID:CDX97707.1InterPro:DNA-bd_dom_sfGO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0003824GO:GO:0004553GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00104957001
InterPro:Glyco_hydro_17InterPro:Glycoside_hydrolase_SFInterPro:IPR001739InterPro:Methyl_CpG_DNA-bdPFAM:PF00332PFAM:PF01429
PFscan:PS50982PANTHER:PTHR32227PANTHER:PTHR32227:SF129SUPFAM:SSF51445SUPFAM:SSF54171TMHMM:TMhelix
UniParc:UPI0004EDE5E0SEG:seg::::
Description
BnaA05g23720D
Coordinates
chrLK031900:+:1085009..1091857
Molecular Weight (calculated)
61112.2 Da
IEP (calculated)
9.971
GRAVY (calculated)
-0.263
Length
549 amino acids
Sequence
(BLAST)
001: MATALFNTTR SSNLYHHHSV LPPFSQRFHL HRQNFFFLAT PRCLRRLAVV GGPPSPPSPD PPPPENTTQL EGVVGAVTRV EDRVKIFLAV LIWMSLFFWV
101: TVVDGMGFSE FSFASVFKGL QQQQKMGTDD EIVSVELPAP SSWKKLVFFP NKVKKTEIVF VSPTGEEISN RKQLEQYLKS HPGIPGSAKF DWTTSGTPRR
201: RSARISEKTK STPSPDKEPP KKRGRTKSSG SKKDTDEGIE IIVGLGNEFL KDISVGEDRA MNWVKENVEP FIRSGTIISG IAVGNEILGG TTVELWEVLL
301: PAAKNVYSAL RRLGLPTRVE VSSPHSEAVF ANSYPPSACT FRDDVVPFMK PLLAFFWQIG SPFYINAYPF LAYKSDPSHI DLNYALFEHS DGIYDAKTKL
401: RYDNMFDAMV DASYAALEKA GFPKVPVIVS DTGWASKGDA DEAGATVKNA RTYNRNLRKR LNKRKGTPHR PDMVARAYVF ALFNENLKPG STSERNFGLF
501: KPDGSIAYDI GFTGLKYSSA TRSRFGTSLN ALVSACVFMF LVLHRLLPL
Best Arabidopsis Sequence Match ( AT3G15800.1 )
(BLAST)
001: MGYCVPLRKS PTSHMVFSSF FLSFLLVFSI LSSQTAVAFI GTYGVNYGRI ADNLPSPDAV ATLLKSAKIR NTRIYDADHS VLTAFRGTGI EIIVGLGNEF
101: LKDISVGEDR AMNWIKENVE PFIRGGTKIS GIAVGNEILG GTDIGLWEAL LPAAKNVYSA LRRLGLHNVV EVSSPHSEAV FANSYPPSSC TFRDDVAPFM
201: KPLLAFFWQI QSPFYINAYP FLAYKSDPIT IDINYALFEH NKGILDPKTK LHYDNMFDAM VDASYAALEK AGYTKVPVIV SETGWASKGD ADEPGASVKN
301: ARTYNRNLRK RLQKRKGTPY RPDMVVRAYV FALFNENSKP GPTSERNFGL FKPDGTIAYD IGLTGLKSSS ATRYRFKSSL VSASAFTCLL LLFHRLFHL
Arabidopsis Description
Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J030]
SUBAcon: [golgi,plastid,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.