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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • mitochondrion 1
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra027207.1-P Field mustard plastid 90.54 72.54
CDX97707 Canola plastid 94.09 72.5
CDY21869 Canola plasma membrane 65.48 70.84
CDY20153 Canola plasma membrane 65.25 70.59
AT3G15800.1 Thale cress golgi, plastid, vacuole 63.59 67.42
KRH47445 Soybean extracellular, vacuole 55.32 60.0
KRH09724 Soybean extracellular, plasma membrane, vacuole 54.14 59.33
PGSC0003DMT400015234 Potato cytosol, peroxisome, plastid 52.01 59.3
KRH44462 Soybean extracellular, vacuole 53.66 58.35
VIT_09s0002g06880.t01 Wine grape vacuole 53.43 56.64
KRH23581 Soybean extracellular, vacuole 47.28 55.71
Solyc06g073710.2.1 Tomato golgi, mitochondrion, plastid, vacuole 51.3 52.67
CDX83243 Canola vacuole 42.55 47.62
CDY38531 Canola golgi, vacuole 42.79 47.38
CDY63842 Canola golgi, vacuole 26.95 39.58
CDX99881 Canola extracellular, vacuole 33.33 37.3
CDY04498 Canola extracellular, vacuole 33.57 36.79
CDX90225 Canola vacuole 34.52 36.05
CDX83270 Canola extracellular, vacuole 33.1 35.9
CDY31181 Canola extracellular, vacuole 32.86 35.64
CDY26296 Canola extracellular, plasma membrane, vacuole 33.33 35.34
CDX90405 Canola vacuole 33.1 35.26
CDX99476 Canola vacuole 33.33 35.16
CDX78840 Canola vacuole 33.33 35.16
CDY01532 Canola vacuole 32.86 35.01
CDX76528 Canola extracellular, vacuole 32.39 34.6
CDX93815 Canola extracellular 33.57 34.3
CDY69080 Canola extracellular 33.57 33.97
CDY13362 Canola extracellular, vacuole 33.1 33.82
CDY34065 Canola extracellular, vacuole 32.15 33.66
CDX67530 Canola extracellular 33.57 33.26
CDX71449 Canola plasma membrane, vacuole 32.86 30.62
CDY22386 Canola extracellular, vacuole 30.97 30.32
CDX71547 Canola extracellular, vacuole 31.21 30.28
CDY17308 Canola extracellular, vacuole 31.44 29.62
CDY06601 Canola endoplasmic reticulum, extracellular 31.21 29.4
CDY20780 Canola extracellular, vacuole 31.21 29.4
CDY56498 Canola extracellular, vacuole 30.5 29.19
CDY18049 Canola extracellular, vacuole 30.5 29.19
CDY46679 Canola extracellular, vacuole 30.26 28.7
CDY19908 Canola extracellular, vacuole 30.97 28.54
CDY36734 Canola extracellular, vacuole 30.97 28.48
CDX92794 Canola endoplasmic reticulum, extracellular 30.26 28.38
CDY12009 Canola extracellular, vacuole 30.73 28.26
CDY28063 Canola vacuole 30.02 27.61
CDY45466 Canola vacuole 29.79 27.39
CDY24629 Canola vacuole 29.79 27.39
CDY08004 Canola vacuole 29.31 26.96
CDY20461 Canola extracellular 28.37 26.67
CDX69064 Canola extracellular, plasma membrane, vacuole 31.68 26.53
CDX75437 Canola extracellular, plasma membrane, vacuole 31.68 26.48
CDY53600 Canola extracellular 28.13 26.44
CDY26761 Canola vacuole 30.97 25.59
CDY37244 Canola vacuole 30.97 25.59
CDY41232 Canola extracellular 27.19 25.5
CDY62387 Canola extracellular 26.95 25.39
CDY53692 Canola extracellular 26.95 25.39
CDY67322 Canola extracellular 13.24 25.34
CDY59775 Canola extracellular, vacuole 28.37 25.32
CDX76097 Canola extracellular 26.95 25.28
CDY19838 Canola extracellular, vacuole 27.9 25.27
CDY18092 Canola extracellular, vacuole 28.37 25.21
CDY40218 Canola extracellular 26.95 25.17
CDX87130 Canola vacuole 27.66 25.16
CDY40219 Canola extracellular 26.71 25.11
CDY41234 Canola extracellular 26.95 25.05
CDY02936 Canola extracellular 26.71 25.0
CDY50110 Canola extracellular, vacuole 28.13 25.0
CDY63754 Canola extracellular, vacuole 28.13 24.9
CDY32869 Canola endoplasmic reticulum, extracellular, plasma membrane 29.55 24.85
CDY64970 Canola extracellular, plasma membrane, vacuole 29.55 24.85
CDY53213 Canola extracellular, vacuole 27.9 24.58
CDY09427 Canola extracellular 28.37 24.14
CDY48807 Canola extracellular 28.37 24.14
CDY12371 Canola extracellular, vacuole 26.95 23.8
CDY27122 Canola extracellular, vacuole 26.48 23.38
CDY08310 Canola extracellular, vacuole 26.48 23.38
CDY06469 Canola extracellular 26.48 23.38
CDY12732 Canola extracellular, vacuole 26.48 23.33
CDY01191 Canola extracellular, vacuole 26.48 23.33
CDY14214 Canola endoplasmic reticulum, extracellular, vacuole 28.13 23.2
CDY58676 Canola extracellular, vacuole 27.42 23.02
CDY16440 Canola extracellular 27.42 23.02
CDY68826 Canola cytosol, endoplasmic reticulum, peroxisome 22.7 22.64
CDY62033 Canola extracellular, plasma membrane, vacuole 28.13 22.33
CDX74052 Canola vacuole 29.08 21.69
CDY59252 Canola extracellular, plasma membrane, vacuole 20.57 21.32
CDY31214 Canola vacuole 25.77 20.88
CDY21013 Canola extracellular 25.53 20.81
CDY06818 Canola extracellular, plasma membrane, vacuole 24.59 20.72
CDY23618 Canola endoplasmic reticulum, plasma membrane, vacuole 20.33 20.43
Protein Annotations
KEGG:00500+3.2.1.39MapMan:12.5.4.3Gene3D:3.20.20.80Gene3D:3.30.890.10GO:A0A078GY27UniProt:A0A078GY27
EnsemblPlants:CDY30112ProteinID:CDY30112ProteinID:CDY30112.1InterPro:DNA-bd_dom_sfGO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0003824GO:GO:0004553GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016787
EnsemblPlantsGene:GSBRNA2T00044676001InterPro:Glyco_hydro_17InterPro:Glycoside_hydrolase_SFInterPro:IPR001739InterPro:Methyl_CpG_DNA-bdPFAM:PF00332
PFAM:PF01429PFscan:PS50982PANTHER:PTHR32227PANTHER:PTHR32227:SF129SUPFAM:SSF51445SUPFAM:SSF54171
UniParc:UPI0004EEFDC1SEG:seg::::
Description
BnaC05g37500DBnaC05g37500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GY27]
Coordinates
chrLK032249:+:144068..147575
Molecular Weight (calculated)
47340.5 Da
IEP (calculated)
9.747
GRAVY (calculated)
-0.352
Length
423 amino acids
Sequence
(BLAST)
001: MGTEDEIVSV ELPAPSSWKK LFFPNKVKTE IVFVSPTGEE FSNRNQLEQY LKSHPRSPAI AEFDWTTSGT PRRRSARISE KTKSTPSPDK EPPKKRGRTK
101: SPGSKKDTDE EIEIIVGLGN EFLKDISVGE DRAMNWVKEN VEPFIRSGTK ISGIAVGNEI LGGTTVELWE VLFPAAKNVY SALRRLGLHT RVEVLHTRRL
201: AVFANSYPPS ACTFRDDVVP FMKPLLAFFW QIGSPFYINA YPFLAYKSDP SHIDLNYALF EHSDGIYDAK TKLRYDNMFD AMVDASYAAL EKAGFPKVPV
301: IVSETGWASK GDADEAGATV KNAITYNRNL RKRLNKRKGT PYRPDMVARA YVFALFNENL KPGPTSERNF GLFKPDGSIA YDVGFTGLKY SSATRSRFGT
401: SLNALVSACV FMFLVLHRLL PLS
Best Arabidopsis Sequence Match ( AT3G15800.1 )
(BLAST)
001: MGYCVPLRKS PTSHMVFSSF FLSFLLVFSI LSSQTAVAFI GTYGVNYGRI ADNLPSPDAV ATLLKSAKIR NTRIYDADHS VLTAFRGTGI EIIVGLGNEF
101: LKDISVGEDR AMNWIKENVE PFIRGGTKIS GIAVGNEILG GTDIGLWEAL LPAAKNVYSA LRRLGLHNVV EVSSPHSEAV FANSYPPSSC TFRDDVAPFM
201: KPLLAFFWQI QSPFYINAYP FLAYKSDPIT IDINYALFEH NKGILDPKTK LHYDNMFDAM VDASYAALEK AGYTKVPVIV SETGWASKGD ADEPGASVKN
301: ARTYNRNLRK RLQKRKGTPY RPDMVVRAYV FALFNENSKP GPTSERNFGL FKPDGTIAYD IGLTGLKSSS ATRYRFKSSL VSASAFTCLL LLFHRLFHL
Arabidopsis Description
Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J030]
SUBAcon: [golgi,vacuole,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.