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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY64970 Canola extracellular, plasma membrane, vacuole 98.61 98.61
AT5G56590.1 Thale cress extracellular, plasma membrane, vacuole 90.66 90.12
VIT_11s0016g02960.t01 Wine grape extracellular, vacuole 71.37 72.67
KRH41480 Soybean extracellular, plasma membrane, vacuole 71.77 72.49
KRH60198 Soybean extracellular, plasma membrane, vacuole 71.17 71.74
Solyc12g008580.1.1 Tomato extracellular 69.18 70.16
PGSC0003DMT400000943 Potato extracellular, vacuole 68.99 69.96
HORVU3Hr1G070400.1 Barley extracellular, vacuole 61.23 67.25
TraesCS3A01G277100.2 Wheat vacuole 63.82 64.98
Os01t0739700-01 Rice plasma membrane 63.62 64.91
GSMUA_Achr4P02650_001 Banana extracellular, vacuole 54.87 64.04
EES01451 Sorghum extracellular, plasma membrane, vacuole 63.22 63.98
Zm00001d043524_P001 Maize plasma membrane 62.82 63.71
TraesCS3D01G277300.4 Wheat vacuole 64.02 60.75
TraesCS3B01G311300.2 Wheat vacuole 64.02 60.64
HORVU3Hr1G070440.12 Barley plastid 61.83 59.81
CDY14214 Canola endoplasmic reticulum, extracellular, vacuole 58.65 57.5
CDY62033 Canola extracellular, plasma membrane, vacuole 59.44 56.1
CDY68826 Canola cytosol, endoplasmic reticulum, peroxisome 46.12 54.72
CDY06818 Canola extracellular, plasma membrane, vacuole 53.68 53.78
CDY56498 Canola extracellular, vacuole 35.98 40.95
CDY18049 Canola extracellular, vacuole 35.39 40.27
CDY20780 Canola extracellular, vacuole 35.79 40.09
CDY17308 Canola extracellular, vacuole 35.39 39.64
CDY06601 Canola endoplasmic reticulum, extracellular 35.39 39.64
CDY48807 Canola extracellular 38.97 39.44
CDY09427 Canola extracellular 38.57 39.03
CDX99881 Canola extracellular, vacuole 29.03 38.62
CDY46679 Canola extracellular, vacuole 34.19 38.56
CDY19908 Canola extracellular, vacuole 35.19 38.56
CDX92794 Canola endoplasmic reticulum, extracellular 34.39 38.36
CDY36734 Canola extracellular, vacuole 34.99 38.26
CDY04498 Canola extracellular, vacuole 29.22 38.08
CDY12009 Canola extracellular, vacuole 34.59 37.83
CDY16440 Canola extracellular 37.38 37.3
CDY31181 Canola extracellular, vacuole 28.83 37.18
CDX83243 Canola vacuole 27.83 37.04
CDY08004 Canola vacuole 33.8 36.96
CDX83270 Canola extracellular, vacuole 28.63 36.92
CDY38531 Canola golgi, vacuole 28.03 36.91
CDY26296 Canola extracellular, plasma membrane, vacuole 29.22 36.84
CDY58676 Canola extracellular, vacuole 36.78 36.71
CDX90405 Canola vacuole 28.83 36.52
CDY21869 Canola plasma membrane 28.23 36.32
CDY20153 Canola plasma membrane 28.23 36.32
CDY01532 Canola vacuole 28.63 36.27
CDX93815 Canola extracellular 29.82 36.23
CDX78840 Canola vacuole 28.83 36.16
CDX99476 Canola vacuole 28.83 36.16
CDY69080 Canola extracellular 30.02 36.12
CDY63842 Canola golgi, vacuole 20.68 36.11
CDX76528 Canola extracellular, vacuole 28.43 36.11
CDX90225 Canola vacuole 29.03 36.05
CDY53692 Canola extracellular 32.01 35.86
CDY40219 Canola extracellular 32.01 35.78
CDY40218 Canola extracellular 32.21 35.76
CDX76097 Canola extracellular 32.01 35.7
CDY24629 Canola vacuole 32.6 35.65
CDY62387 Canola extracellular 31.81 35.63
CDY02936 Canola extracellular 32.01 35.62
CDX69064 Canola extracellular, plasma membrane, vacuole 35.59 35.45
CDY28063 Canola vacuole 32.41 35.43
CDY41234 Canola extracellular 32.01 35.38
CDY41232 Canola extracellular 31.61 35.26
CDY45466 Canola vacuole 32.21 35.22
CDX75437 Canola extracellular, plasma membrane, vacuole 35.39 35.18
CDY34065 Canola extracellular, vacuole 28.23 35.15
CDY53600 Canola extracellular 31.41 35.11
CDY20461 Canola extracellular 31.41 35.11
CDY67322 Canola extracellular 15.11 34.39
CDY26761 Canola vacuole 34.99 34.38
CDY59775 Canola extracellular, vacuole 32.21 34.18
CDY53213 Canola extracellular, vacuole 32.6 34.17
CDY37244 Canola vacuole 34.59 33.98
CDY59252 Canola extracellular, plasma membrane, vacuole 27.44 33.82
CDY63754 Canola extracellular, vacuole 32.01 33.68
CDY22386 Canola extracellular, vacuole 28.83 33.56
CDX87130 Canola vacuole 31.01 33.55
CDY23618 Canola endoplasmic reticulum, plasma membrane, vacuole 28.03 33.49
CDX71547 Canola extracellular, vacuole 28.83 33.26
CDY18092 Canola extracellular, vacuole 31.41 33.19
CDY08310 Canola extracellular, vacuole 31.41 32.99
CDY19838 Canola extracellular, vacuole 30.62 32.98
CDY50110 Canola extracellular, vacuole 31.01 32.77
CDY21013 Canola extracellular 33.8 32.76
CDY13362 Canola extracellular, vacuole 26.84 32.61
CDY31214 Canola vacuole 33.8 32.57
CDY27122 Canola extracellular, vacuole 30.82 32.36
CDY06469 Canola extracellular 30.62 32.15
CDY12371 Canola extracellular, vacuole 30.62 32.15
CDX71449 Canola plasma membrane, vacuole 28.83 31.94
CDX67530 Canola extracellular 27.04 31.85
CDY12732 Canola extracellular, vacuole 30.22 31.67
CDY01191 Canola extracellular, vacuole 30.02 31.46
CDY30112 Canola cytosol 24.85 29.55
CDX74052 Canola vacuole 33.2 29.45
CDX97707 Canola plastid 25.45 23.32
Protein Annotations
KEGG:00500+3.2.1.39Gene3D:3.20.20.80MapMan:50.3.2GO:A0A078H5W3UniProt:A0A078H5W3EnsemblPlants:CDY32869
ProteinID:CDY32869ProteinID:CDY32869.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0016798EnsemblPlantsGene:GSBRNA2T00052998001InterPro:Glyco_hydro_17
InterPro:Glycoside_hydrolase_SFPFAM:PF00332PFAM:PF07983ScanProsite:PS00587PANTHER:PTHR32227PANTHER:PTHR32227:SF88
SMART:SM00768SUPFAM:SSF51445SignalP:SignalP-noTMUniParc:UPI0004EDF4B0InterPro:X8SEG:seg
Description
BnaC09g33160DBnaC09g33160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H5W3]
Coordinates
chrLK032301:+:130284..132592
Molecular Weight (calculated)
55054.9 Da
IEP (calculated)
6.874
GRAVY (calculated)
-0.186
Length
503 amino acids
Sequence
(BLAST)
001: MEKLIFSISL LLLLLDGCYG GKVGVCYGRS ADDLPTPAKV VQLIKQHNIK YVRIYDYNSQ VLKAFANTSI ELMIGVPNSD LKPFSQFQSN ADTWLKNSVL
101: PYYPTTKITY ITVGAESTDD PHTNASSFVV PAMQNVLTAL KKVGLSRRIK VSTTLSLGVL SRSFPPSAGA FNSSYAYFLR PMLEFLAENQ SPFMVDLYPY
201: YAYRDSPNNV SLDYVLFESS SEVIDPNTGL LYKNMFDAQV DALYYALTAL NFRTIKIMVT ETGWPTKGSP KEKGAASPDN AETYNSNIIR HTVTNQGTPS
301: KPGEAMDVYI FSLFNENRKT GLDSERNWGL FYPDQTSVYQ LDFTGKNGGF RSNSSGGNSR GRSESWCIAS SKASEIELRG ALDWACGPGN VDCTAIQPSQ
401: PCFQPDTLVS HASFVFNSYF QQNGGTDVAC SFGGVGVKVN KDPSYDKCVY ITAGGNNTKA TNASALNSSA STSRGNESLV WNLSLCLVIL LLFSLQTTNS
501: QAL
Best Arabidopsis Sequence Match ( AT5G56590.1 )
(BLAST)
001: MARDFKLIFS ISILLLLLDC CYGGKVGVCY GRSADDLPTP SKVVQLIQQH NIKYVRIYDY NSQVLKAFGN TSIELMIGVP NSDLNAFSQS QSNVDTWLKN
101: SVLPYYPTTK ITYITVGAES TDDPHINASS FVVPAMQNVL TALRKVGLSR RIKVSTTLSL GILSRSFPPS AGAFNSSYAY FLRPMLEFLA ENKSPFMIDL
201: YPYYAYRDSP NNVSLDYVLF ESSSEVIDPN TGLLYKNMFD AQVDALYYAL TALNFRTIKI MVTETGWPTK GSPKEKAAAS SDNAETYNSN IIRHVVTNQG
301: TPAKPGEAMN VYIFSLFNEN RKAGLDSERN WGLFYPDQTS VYQLDFTGKS NGFHSNSSGT NSSGSSNSWC IASSKASERD LKGALDWACG PGNVDCTAIQ
401: PSQPCFQPDT LVSHASFVFN SYFQQNRATD VACSFGGAGV KVNKDPSYDK CIYITAGGNK TKATNATALT SSASTPRGNE LLQWILKLCL MISLFFSLQT
501: MNSQAL
Arabidopsis Description
Glucan endo-1,3-beta-glucosidase 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJU9]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.