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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra032357.1-P Field mustard extracellular, vacuole 98.68 98.68
CDY26296 Canola extracellular, plasma membrane, vacuole 96.56 91.48
AT1G30080.1 Thale cress vacuole 89.15 82.6
CDX90225 Canola vacuole 88.36 82.47
CDY63842 Canola golgi, vacuole 58.99 77.43
VIT_10s0003g03690.t01 Wine grape extracellular 68.25 68.8
CDX99476 Canola vacuole 62.7 59.1
CDX78840 Canola vacuole 62.7 59.1
CDX76528 Canola extracellular, vacuole 61.9 59.09
CDY01532 Canola vacuole 61.9 58.94
CDX90405 Canola vacuole 61.9 58.94
CDY34065 Canola extracellular, vacuole 61.64 57.67
Zm00001d046134_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 57.67 53.56
EER88444 Sorghum extracellular, vacuole 57.67 53.43
TraesCS7A01G349200.1 Wheat endoplasmic reticulum, extracellular 56.08 52.35
TraesCS7D01G329400.1 Wheat endoplasmic reticulum, extracellular 55.82 52.1
TraesCS7B01G233500.1 Wheat extracellular 55.82 52.1
HORVU7Hr1G079650.7 Barley extracellular, vacuole 55.29 47.61
CDY04498 Canola extracellular, vacuole 46.56 45.6
CDX83270 Canola extracellular, vacuole 45.77 44.36
CDY31181 Canola extracellular, vacuole 45.5 44.1
Os06t0531000-00 Rice vacuole 55.82 42.54
CDX93815 Canola extracellular 45.77 41.79
CDY69080 Canola extracellular 46.03 41.63
CDY13362 Canola extracellular, vacuole 44.44 40.58
CDX67530 Canola extracellular 45.24 40.05
CDY21869 Canola plasma membrane 41.01 39.64
CDY20153 Canola plasma membrane 41.01 39.64
CDY38531 Canola golgi, vacuole 38.62 38.22
CDX71449 Canola plasma membrane, vacuole 45.77 38.11
CDX83243 Canola vacuole 37.83 37.83
CDY18049 Canola extracellular, vacuole 43.92 37.56
CDY56498 Canola extracellular, vacuole 43.65 37.33
CDY20780 Canola extracellular, vacuole 44.18 37.19
CDY06601 Canola endoplasmic reticulum, extracellular 43.92 36.97
CDY17308 Canola extracellular, vacuole 43.92 36.97
CDX92794 Canola endoplasmic reticulum, extracellular 43.92 36.81
CDY46679 Canola extracellular, vacuole 43.12 36.55
CDY36734 Canola extracellular, vacuole 44.18 36.3
CDY19908 Canola extracellular, vacuole 43.92 36.17
CDY12009 Canola extracellular, vacuole 43.92 36.09
CDY22386 Canola extracellular, vacuole 41.01 35.88
CDX71547 Canola extracellular, vacuole 40.74 35.32
CDY30112 Canola cytosol 37.3 33.33
CDX87130 Canola vacuole 41.01 33.33
CDY19838 Canola extracellular, vacuole 40.21 32.55
CDY20461 Canola extracellular 37.3 31.33
CDY40219 Canola extracellular 36.51 30.67
CDY53600 Canola extracellular 36.51 30.67
CDX76097 Canola extracellular 36.51 30.6
CDX69064 Canola extracellular, plasma membrane, vacuole 40.74 30.5
CDX75437 Canola extracellular, plasma membrane, vacuole 40.48 30.24
CDY41232 Canola extracellular 35.98 30.16
CDY02936 Canola extracellular 35.98 30.09
CDY41234 Canola extracellular 35.71 29.67
CDY53692 Canola extracellular 35.19 29.62
CDY62387 Canola extracellular 35.19 29.62
CDY40218 Canola extracellular 35.45 29.58
CDY24629 Canola vacuole 35.45 29.13
CDY64970 Canola extracellular, plasma membrane, vacuole 38.62 29.03
CDY32869 Canola endoplasmic reticulum, extracellular, plasma membrane 38.62 29.03
CDY28063 Canola vacuole 35.19 28.91
CDY37244 Canola vacuole 39.15 28.91
CDY26761 Canola vacuole 39.15 28.91
CDY14214 Canola endoplasmic reticulum, extracellular, vacuole 39.15 28.85
CDY48807 Canola extracellular 37.57 28.57
CDY09427 Canola extracellular 37.57 28.57
CDY59775 Canola extracellular, vacuole 35.71 28.48
CDY08004 Canola vacuole 34.66 28.48
CDY45466 Canola vacuole 34.39 28.26
CDY63754 Canola extracellular, vacuole 35.45 28.03
CDY53213 Canola extracellular, vacuole 35.45 27.92
CDY62033 Canola extracellular, plasma membrane, vacuole 39.15 27.77
CDY01191 Canola extracellular, vacuole 35.19 27.71
CDY50110 Canola extracellular, vacuole 34.66 27.52
CDY18092 Canola extracellular, vacuole 34.66 27.52
CDY12732 Canola extracellular, vacuole 34.92 27.5
CDY06469 Canola extracellular 33.86 26.72
CDY06818 Canola extracellular, plasma membrane, vacuole 35.45 26.69
CDY08310 Canola extracellular, vacuole 33.6 26.51
CDY12371 Canola extracellular, vacuole 33.6 26.51
CDY27122 Canola extracellular, vacuole 33.33 26.3
CDY16440 Canola extracellular 34.39 25.79
CDY58676 Canola extracellular, vacuole 34.39 25.79
CDX97707 Canola plastid 37.3 25.68
CDY68826 Canola cytosol, endoplasmic reticulum, peroxisome 28.04 25.0
CDY21013 Canola extracellular 33.6 24.47
CDY31214 Canola vacuole 33.6 24.33
CDY67322 Canola extracellular 14.02 23.98
CDY59252 Canola extracellular, plasma membrane, vacuole 25.4 23.53
CDY23618 Canola endoplasmic reticulum, plasma membrane, vacuole 25.66 23.04
CDX74052 Canola vacuole 34.39 22.93
Protein Annotations
KEGG:00500+3.2.1.39Gene3D:3.20.20.80MapMan:50.3.2GO:A0A078EFH1EnsemblPlants:CDX99881ProteinID:CDX99881
ProteinID:CDX99881.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00108635001InterPro:Glyco_hydro_17InterPro:Glycoside_hydrolase_SFPFAM:PF00332
PANTHER:PTHR32227PANTHER:PTHR32227:SF85SUPFAM:SSF51445SignalP:SignalP-noTMUniParc:UPI0004EB0B96SEG:seg
Description
BnaC05g23030D
Coordinates
chrLK031914:-:915243..916544
Molecular Weight (calculated)
41646.5 Da
IEP (calculated)
4.952
GRAVY (calculated)
-0.090
Length
378 amino acids
Sequence
(BLAST)
001: MTNSIVLLLF FLTFLEHGLF FQRVSSLGIN YGQVGDNLPP PNKVLQLLSS LNINKTRIYD TNPQVLTSFA NSNIELFVTV ENEMLPSLVD PQKALQWVTS
101: RMKPYFPATK IGGIAVGNEL YTDDDSSLIG YLVPAMTSIH AALVQTGLDK YIQVSTPSSL SVLQESYPPS AGCFRPQVAG VMTQLLSFLR STKSPFWINA
201: YPYFAYKDSP TKIPLDYVLY NPNPGMVDPY TKYHYDNMLY AQVDAVIFAM ARLGFKDIEV GVSETGWPSK GDGDEIGATV ANAAVYNKNL LKRQLHGEGT
301: PLRPNMSLDV YLFALFNEDL KPGPTSERNY GLYQPDENMT YNVGLLSSSS TSSQSSTSTN SFMSITSSAS TVCTNTGF
Best Arabidopsis Sequence Match ( AT1G30080.2 )
(BLAST)
001: MSNMFSRIAM TNSIVLLLFS LTFLEHGLLF QRVSSLGINY GQVGDNLPPP DKVLQLLSSL HINKTRIYDT NPRVLTSFAN SNIELFVTVE NEMLPSLVDP
101: QQALQWVTTR IKPYFPATKI GGIAVGNELY TDDDSSLIGY LMPAMMSIHG ALVQTGLDKY IQVSTPNSLS VLQESYPPSA GCFRPEVAGV MTQLLGFLRN
201: TNSPFWINAY PYFAYKDSPT KIPLDYVLFN PNPGMVDPYT KYRYDNMLYA QVDAVIFAMA RLGFKDIEVG VSETGWPSKG DGDEVGATVA NAAVYNKNIL
301: RRQLQNEGTP LRPNLSFDVY LFALFNEDLK PGPTSERNYG LYQPDETMTY NVGLLSSSSL TSTSTTSSTS IISLTSSAST VCINI
Arabidopsis Description
Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I4R0]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.