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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 7
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX76554
CDX90440
CDY01498
CDY07739
CDY08877
CDY14471
CDY69797
CDY70860

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G18340.1 CDY07739 AT2G38310.1 19407142
AT4G18340.1 CDY14471 AT2G38310.1 19407142
AT4G18340.1 CDX76554 AT4G17870.1 19407142
AT4G18340.1 CDX90440 AT4G17870.1 19407142
AT4G18340.1 CDY01498 AT4G17870.1 19407142
AT4G18340.1 CDY08877 AT4G17870.1 19407142
AT4G18340.1 CDY69797 AT4G17870.1 19407142
AT4G18340.1 CDY70860 AT4G17870.1 19407142
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra012604.1-P Field mustard vacuole 99.75 99.75
CDY01532 Canola vacuole 99.24 99.24
CDX99476 Canola vacuole 94.46 93.52
CDX78840 Canola vacuole 94.21 93.27
AT4G18340.1 Thale cress vacuole 91.18 91.18
CDX76528 Canola extracellular, vacuole 88.92 89.14
CDY34065 Canola extracellular, vacuole 88.41 86.88
CDX99881 Canola extracellular, vacuole 58.94 61.9
CDY26296 Canola extracellular, plasma membrane, vacuole 60.96 60.65
CDX90225 Canola vacuole 61.71 60.49
KRH11184 Soybean endoplasmic reticulum, extracellular, vacuole 59.7 59.55
Solyc02g070450.1.1 Tomato endoplasmic reticulum, extracellular, vacuole 59.45 59.15
KRH21069 Soybean vacuole 59.45 59.15
KRG89350 Soybean extracellular, vacuole 58.69 58.25
CDY63842 Canola golgi, vacuole 40.05 55.21
KRH50394 Soybean extracellular, vacuole 59.95 54.71
EER88444 Sorghum extracellular, vacuole 51.89 50.49
Zm00001d046134_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 51.13 49.88
TraesCS7A01G349200.1 Wheat endoplasmic reticulum, extracellular 49.87 48.89
TraesCS7D01G329400.1 Wheat endoplasmic reticulum, extracellular 49.62 48.64
TraesCS7B01G233500.1 Wheat extracellular 49.62 48.64
CDY04498 Canola extracellular, vacuole 43.58 44.82
HORVU7Hr1G079650.7 Barley extracellular, vacuole 49.12 44.42
CDX83270 Canola extracellular, vacuole 43.32 44.1
CDY31181 Canola extracellular, vacuole 43.07 43.85
Os06t0531000-00 Rice vacuole 52.14 41.73
CDX93815 Canola extracellular 42.82 41.06
CDY69080 Canola extracellular 42.82 40.67
CDY21869 Canola plasma membrane 39.55 40.15
CDY20153 Canola plasma membrane 39.55 40.15
CDY13362 Canola extracellular, vacuole 40.3 38.65
CDX71449 Canola plasma membrane, vacuole 43.32 37.89
CDX67530 Canola extracellular 40.55 37.7
CDX83243 Canola vacuole 35.52 37.3
CDY38531 Canola golgi, vacuole 35.26 36.65
CDY56498 Canola extracellular, vacuole 38.54 34.62
CDX92794 Canola endoplasmic reticulum, extracellular 39.04 34.37
CDY18049 Canola extracellular, vacuole 38.04 34.16
CDY46679 Canola extracellular, vacuole 37.78 33.63
CDY20780 Canola extracellular, vacuole 38.04 33.63
CDY06601 Canola endoplasmic reticulum, extracellular 38.04 33.63
CDY17308 Canola extracellular, vacuole 37.78 33.41
CDY30112 Canola cytosol 35.26 33.1
CDY19908 Canola extracellular, vacuole 38.04 32.9
CDY36734 Canola extracellular, vacuole 38.04 32.83
CDY12009 Canola extracellular, vacuole 38.04 32.83
CDY22386 Canola extracellular, vacuole 33.0 30.32
CDX71547 Canola extracellular, vacuole 33.0 30.05
CDX87130 Canola vacuole 34.76 29.68
CDY19838 Canola extracellular, vacuole 34.76 29.55
CDY20461 Canola extracellular 33.0 29.11
CDX69064 Canola extracellular, plasma membrane, vacuole 37.03 29.11
CDY62387 Canola extracellular 32.75 28.95
CDY53692 Canola extracellular 32.75 28.95
CDY37244 Canola vacuole 37.28 28.91
CDY26761 Canola vacuole 37.28 28.91
CDX75437 Canola extracellular, plasma membrane, vacuole 36.78 28.85
CDY64970 Canola extracellular, plasma membrane, vacuole 36.52 28.83
CDY32869 Canola endoplasmic reticulum, extracellular, plasma membrane 36.52 28.83
CDY08004 Canola vacuole 33.25 28.7
CDY24629 Canola vacuole 33.25 28.7
CDY59775 Canola extracellular, vacuole 34.26 28.69
CDY14214 Canola endoplasmic reticulum, extracellular, vacuole 37.03 28.66
CDY28063 Canola vacuole 33.0 28.48
CDY53600 Canola extracellular 32.24 28.44
CDX76097 Canola extracellular 31.99 28.16
CDY18092 Canola extracellular, vacuole 33.75 28.15
CDY50110 Canola extracellular, vacuole 33.75 28.15
CDY63754 Canola extracellular, vacuole 33.75 28.03
CDY40219 Canola extracellular 31.74 28.0
CDY02936 Canola extracellular 31.74 27.88
CDY45466 Canola vacuole 32.24 27.83
CDY06469 Canola extracellular 33.5 27.77
CDY08310 Canola extracellular, vacuole 33.5 27.77
CDY41232 Canola extracellular 31.49 27.72
CDY53213 Canola extracellular, vacuole 33.5 27.71
CDY01191 Canola extracellular, vacuole 33.5 27.71
CDY12732 Canola extracellular, vacuole 33.5 27.71
CDY48807 Canola extracellular 34.51 27.57
CDY41234 Canola extracellular 31.49 27.47
CDY40218 Canola extracellular 31.23 27.37
CDY09427 Canola extracellular 34.26 27.36
CDY62033 Canola extracellular, plasma membrane, vacuole 36.52 27.2
CDY16440 Canola extracellular 34.01 26.79
CDY12371 Canola extracellular, vacuole 32.24 26.72
CDY27122 Canola extracellular, vacuole 31.99 26.51
CDY58676 Canola extracellular, vacuole 33.5 26.39
CDY06818 Canola extracellular, plasma membrane, vacuole 33.25 26.29
CDX97707 Canola plastid 36.27 26.23
CDY67322 Canola extracellular 13.6 24.43
CDY68826 Canola cytosol, endoplasmic reticulum, peroxisome 25.44 23.82
CDY23618 Canola endoplasmic reticulum, plasma membrane, vacuole 25.19 23.75
CDY59252 Canola extracellular, plasma membrane, vacuole 24.18 23.53
CDX74052 Canola vacuole 32.49 22.75
CDY21013 Canola extracellular 29.22 22.35
CDY31214 Canola vacuole 29.22 22.22
Protein Annotations
KEGG:00500+3.2.1.39Gene3D:3.20.20.80MapMan:50.3.2GO:A0A078DMM3EnsemblPlants:CDX90405ProteinID:CDX90405
ProteinID:CDX90405.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00151007001InterPro:Glyco_hydro_17InterPro:Glycoside_hydrolase_SFPFAM:PF00332
PANTHER:PTHR32227PANTHER:PTHR32227:SF229SUPFAM:SSF51445SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EE97B2
SEG:seg:::::
Description
BnaA03g43760D
Coordinates
chrLK031863:+:2419..4397
Molecular Weight (calculated)
44153.2 Da
IEP (calculated)
8.514
GRAVY (calculated)
-0.062
Length
397 amino acids
Sequence
(BLAST)
001: MTSRTVARLP NLINVFLLLS LVLSGNILQK ATSLGINYGQ VGNNLPSPDK VINLLRSLRI TKTRIYDTNP QILTSFANSN IEIIVTIENQ VLTLLQDPQQ
101: ALQWVDSHIK PYIPATRITG IMVGNELFTD EDSSLIGYMM PAIINIHKAL VQLGLDRYIE VSSPSSLAVL AESYPPSAGS FKPEVSSVMQ QLLQFLEATR
201: SPFWINAYPY FAYKDNPNKI PIDYVLFNRN IGMTDPNTRL HYDNMMYAQV DAVAFAAAKL GYRNIEVRVA ETGWPSKGDA GEVGASPTNA ATYNRNLMMR
301: QFAGEGTPAR RNSRLDVYIF ALFNEDMKPG PTSEKNYGIF RPDGSLAYNL GFSTMSTTTA NSESVTYSSY ATKAKMTLEY WTILMLAMIQ VVVSRLS
Best Arabidopsis Sequence Match ( AT4G18340.1 )
(BLAST)
001: MTSRTFTRHS SLIHVFLLLS LVFSGNILQT VTSLGINYGQ VGNNLPSPDK VINLLRSLRI TKTRIYDTNP QILSAFANSN IEIIVTIENQ VLPLLQDPQQ
101: ATQWVDSHIK PYVPATRITG IMVGNELFTD DDSSLIGYMM PAIINIHKAL VQLGLDRYIQ VSSPSSLAVL GESYPPSAGS FKPEVSSVMQ QLLDFLEATK
201: SPFWINAYPY FAYKDNPQEI PVDYVLFNRN IGMTDPNTRL HYDNMMYAQV DAVAFAAAKL GYRNIEVRVA ETGWPSKGDV GEIGASPVNA ATYNRNLMMR
301: QFAGEGTPAR RNARLDVYIF ALFNEDMKPG PTSEKNYGIF QPDGSLAYNL GFSTMSTTTA NSESVTYSSS ATKAKRSLEY WTILILAMVQ VVMLRLF
Arabidopsis Description
Beta-1,3-glucanase-like protein [Source:UniProtKB/TrEMBL;Acc:Q8L837]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.