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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • golgi 5
  • plasma membrane 5
  • endoplasmic reticulum 5
  • vacuole 6
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX67530 Canola extracellular 96.14 93.21
Bra028526.1-P Field mustard extracellular, vacuole 96.62 93.02
AT5G42100.1 Thale cress extracellular, vacuole 85.99 83.76
VIT_02s0025g02770.t01 Wine grape extracellular 55.8 57.04
PGSC0003DMT400031570 Potato extracellular, vacuole 56.28 56.01
CDY69080 Canola extracellular 55.8 55.26
Solyc08g083310.2.1 Tomato nucleus 56.28 55.08
CDX93815 Canola extracellular 54.83 54.83
KRH34248 Soybean extracellular, plasma membrane, vacuole 54.59 54.59
Solyc12g055840.1.1 Tomato nucleus 55.56 54.5
PGSC0003DMT400012898 Potato cytosol 53.62 54.01
CDY04498 Canola extracellular, vacuole 44.69 47.93
CDY31181 Canola extracellular, vacuole 44.44 47.18
CDX83270 Canola extracellular, vacuole 44.2 46.92
TraesCS1A01G055900.1 Wheat extracellular 32.13 46.02
Zm00001d028410_P001 Maize vacuole 39.37 45.15
CDX99881 Canola extracellular, vacuole 40.58 44.44
Os10t0160100-01 Rice extracellular, vacuole 44.69 44.05
TraesCS1D01G056500.1 Wheat extracellular, vacuole 43.0 43.95
TraesCS1B01G072500.1 Wheat extracellular, vacuole 43.0 43.84
TraesCS1A01G049800.1 Wheat extracellular, vacuole 42.75 43.6
Zm00001d030361_P001 Maize plasma membrane 42.51 43.56
HORVU1Hr1G010910.2 Barley extracellular, vacuole 43.24 43.45
TraesCS1B01G072600.1 Wheat endoplasmic reticulum, extracellular, vacuole 42.03 43.18
CDY63842 Canola golgi, vacuole 29.71 42.71
CDY26296 Canola extracellular, plasma membrane, vacuole 41.06 42.61
TraesCS4A01G067900.1 Wheat vacuole 42.75 42.34
TraesCS4B01G225100.1 Wheat vacuole 42.75 42.34
TraesCS4D01G225700.1 Wheat vacuole 42.75 42.34
CDX90225 Canola vacuole 40.82 41.73
Os03t0246100-01 Rice extracellular, vacuole 43.0 41.4
HORVU1Hr1G011210.1 Barley vacuole 42.51 40.93
TraesCS7A01G069700.1 Wheat extracellular, vacuole 42.03 40.56
TraesCSU01G153100.1 Wheat extracellular, vacuole 42.03 40.56
KXG38664 Sorghum extracellular, vacuole 42.51 40.55
Os06t0131500-01 Rice plastid 43.96 40.53
HORVU4Hr1G063240.7 Barley golgi, vacuole 42.27 40.42
TraesCS7D01G065400.1 Wheat extracellular, vacuole 41.79 40.33
CDX71449 Canola plasma membrane, vacuole 44.2 40.31
CDX90405 Canola vacuole 38.65 40.3
CDX83243 Canola vacuole 36.72 40.21
CDY01532 Canola vacuole 38.41 40.05
CDX78840 Canola vacuole 38.65 39.9
CDX99476 Canola vacuole 38.65 39.9
CDY38531 Canola golgi, vacuole 36.72 39.79
GSMUA_Achr11P... Banana extracellular, plasma membrane, vacuole 37.68 39.39
CDX76528 Canola extracellular, vacuole 37.2 38.89
CDY20153 Canola plasma membrane 36.72 38.87
CDY21869 Canola plasma membrane 36.72 38.87
Zm00001d036051_P001 Maize extracellular, vacuole 39.61 38.5
CDY34065 Canola extracellular, vacuole 36.96 37.87
HORVU7Hr1G012550.1 Barley vacuole 40.82 37.81
CDY18049 Canola extracellular, vacuole 38.89 36.43
CDY56498 Canola extracellular, vacuole 38.65 36.2
KXG19201 Sorghum plastid 40.1 35.78
CDY17308 Canola extracellular, vacuole 37.92 34.97
CDY20780 Canola extracellular, vacuole 37.92 34.97
CDY06601 Canola endoplasmic reticulum, extracellular 37.68 34.74
CDY22386 Canola extracellular, vacuole 36.23 34.72
CDY19908 Canola extracellular, vacuole 38.41 34.64
CDX92794 Canola endoplasmic reticulum, extracellular 37.68 34.59
CDX71547 Canola extracellular, vacuole 36.23 34.4
CDY46679 Canola extracellular, vacuole 36.96 34.3
CDY36734 Canola extracellular, vacuole 36.96 33.26
CDY30112 Canola cytosol 33.82 33.1
CDY12009 Canola extracellular, vacuole 36.72 33.04
TraesCS1A01G046000.1 Wheat extracellular, vacuole 28.74 32.78
CDX75437 Canola extracellular, plasma membrane, vacuole 39.61 32.41
CDX69064 Canola extracellular, plasma membrane, vacuole 38.65 31.68
CDY40219 Canola extracellular 34.06 31.33
CDY41232 Canola extracellular 33.82 31.04
CDX76097 Canola extracellular 33.57 30.82
CDY02936 Canola extracellular 33.33 30.53
CDY20461 Canola extracellular 33.09 30.44
CDY41234 Canola extracellular 33.33 30.33
CDX87130 Canola vacuole 34.06 30.32
CDY53692 Canola extracellular 32.85 30.29
CDY62387 Canola extracellular 32.85 30.29
CDY40218 Canola extracellular 33.09 30.24
CDY28063 Canola vacuole 33.57 30.22
CDY12732 Canola extracellular, vacuole 35.02 30.21
CDY08310 Canola extracellular, vacuole 34.78 30.06
CDY12371 Canola extracellular, vacuole 34.78 30.06
CDY01191 Canola extracellular, vacuole 34.78 30.0
CDY24629 Canola vacuole 33.33 30.0
CDY45466 Canola vacuole 33.33 30.0
CDY53213 Canola extracellular, vacuole 34.78 30.0
CDY19838 Canola extracellular, vacuole 33.57 29.76
CDY26761 Canola vacuole 36.72 29.69
CDY37244 Canola vacuole 36.72 29.69
CDY06469 Canola extracellular 34.3 29.65
CDY27122 Canola extracellular, vacuole 34.3 29.65
CDY53600 Canola extracellular 32.13 29.56
CDY18092 Canola extracellular, vacuole 33.82 29.41
CDY50110 Canola extracellular, vacuole 33.82 29.41
CDY08004 Canola vacuole 32.61 29.35
CDY59775 Canola extracellular, vacuole 33.57 29.32
CDY63754 Canola extracellular, vacuole 33.33 28.87
CDY09427 Canola extracellular 34.3 28.57
CDY48807 Canola extracellular 34.3 28.57
CDY32869 Canola endoplasmic reticulum, extracellular, plasma membrane 32.61 26.84
CDY64970 Canola extracellular, plasma membrane, vacuole 32.61 26.84
CDY14214 Canola endoplasmic reticulum, extracellular, vacuole 32.85 26.51
CDY67322 Canola extracellular 14.01 26.24
CDX97707 Canola plastid 34.78 26.23
CDY06818 Canola extracellular, plasma membrane, vacuole 31.64 26.1
CDY62033 Canola extracellular, plasma membrane, vacuole 33.33 25.89
CDY68826 Canola cytosol, endoplasmic reticulum, peroxisome 26.33 25.71
CDY58676 Canola extracellular, vacuole 31.16 25.6
CDY16440 Canola extracellular 30.92 25.4
CDY21013 Canola extracellular 31.4 25.05
CDY31214 Canola vacuole 30.92 24.52
CDX74052 Canola vacuole 32.13 23.46
CDY59252 Canola extracellular, plasma membrane, vacuole 22.46 22.79
CDY23618 Canola endoplasmic reticulum, plasma membrane, vacuole 22.95 22.57
OQU92921 Sorghum mitochondrion 43.24 16.36
Protein Annotations
KEGG:00500+3.2.1.39Gene3D:3.20.20.80MapMan:50.3.2GO:A0A078FK28UniProt:A0A078FK28EnsemblPlants:CDY13362
ProteinID:CDY13362ProteinID:CDY13362.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0016798EnsemblPlantsGene:GSBRNA2T00071384001InterPro:Glyco_hydro_17
InterPro:Glycoside_hydrolase_SFPFAM:PF00332ScanProsite:PS00587PANTHER:PTHR32227PANTHER:PTHR32227:SF236SUPFAM:SSF51445
SignalP:SignalP-TMTMHMM:TMhelixUniParc:UPI0004EED0C1SEG:seg::
Description
BnaC06g13950DBnaC06g13950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FK28]
Coordinates
chrLK032034:+:665178..666564
Molecular Weight (calculated)
44012.3 Da
IEP (calculated)
6.945
GRAVY (calculated)
-0.039
Length
414 amino acids
Sequence
(BLAST)
001: MAPSQISFSL VCVALLFFSF LLTVTSIGIN YGQVANNLPP PKNVIPLLKS VGATKVKLYD ADPQALRAFS GSGFDLTISL GNEYLAQMKD SDKARDWVKQ
101: NVQAYLPGTK IVAIVVGNEV LTSNQSDLSA ALFPAMQSIH GALVDCGLNK QIFVTTAHSL AILDVSYPPS ATSFRHDLLG TLTPILDFHV KTGSPILINA
201: YPFFAYEGNP KHISLDFVLF QPNQGFTDPG SNFHYDNMLF AQVDAVYHAL DAVGISYKKV PIVVSETGWP SNGDPQEVGA NCDNARKYNG NLIKMMMSKK
301: MRTPIRPDCD LTIFVFALFN ENMKPGPTSE RNYGLFHPDG TPVYSLGIKT SSSSGGSSGS KNSTGGGGSS SSGGTTGGSP GGGGGGGIYT PENPSPDYMS
401: ISSARVYSGW LITA
Best Arabidopsis Sequence Match ( AT5G42100.2 )
(BLAST)
001: MASSSLQSLF SLFCLALFSL PLIVSSIGIN YGQVANNLPP PKNVIPLLKS VGATKVKLYD ADPQALRAFA GSGFELTVAL GNEYLAQMSD PIKAQGWVKE
101: NVQAYLPNTK IVAIVVGNEV LTSNQSALTA ALFPAMQSIH GALVDCGLNK QIFVTTAHSL AILDVSYPPS ATSFRRDLLG SLTPILDFHV KTGSPILINA
201: YPFFAYEENP KHVSLDFVLF QPNQGFTDPG SNFHYDNMLF AQVDAVYHAL DAVGISYKKV PIVVSETGWP SNGDPQEVGA TCDNARKYNG NLIKMMMSKK
301: MRTPIRPECD LTIFVFALFN ENMKPGPTSE RNYGLFNPDG TPVYSLGIKT SSTHSSGSGS SNSTGGSSSG GGGNTGGSSS GGGIYQPVTG NPSPDYMSIS
401: SAGVTFSTLH FICCFTLTIF VDI
Arabidopsis Description
ATBG_PPAPGlucan endo-1,3-beta-glucosidase 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHX5]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.