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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY27122 Canola extracellular, vacuole 97.08 97.08
CDY08310 Canola extracellular, vacuole 87.68 87.68
CDY06469 Canola extracellular 86.64 86.64
CDY12732 Canola extracellular, vacuole 85.8 85.62
CDY01191 Canola extracellular, vacuole 85.39 85.21
AT4G14080.1 Thale cress vacuole 83.3 83.47
CDY67322 Canola extracellular 35.28 76.47
CDY59775 Canola extracellular, vacuole 72.03 72.78
CDY50110 Canola extracellular, vacuole 72.23 72.69
CDY18092 Canola extracellular, vacuole 72.03 72.48
CDY63754 Canola extracellular, vacuole 72.03 72.18
CDY53213 Canola extracellular, vacuole 70.56 70.42
KRH20365 Soybean extracellular, vacuole 46.97 57.54
Solyc12g098560.1.1 Tomato extracellular 53.86 56.21
CDY24629 Canola vacuole 48.23 50.22
CDY28063 Canola vacuole 47.81 49.78
CDY45466 Canola vacuole 47.39 49.35
GSMUA_Achr8P08800_001 Banana peroxisome, plastid, vacuole 39.67 48.84
CDY08004 Canola vacuole 46.35 48.26
EER99139 Sorghum endoplasmic reticulum, plasma membrane 46.56 46.17
Zm00001d021024_P001 Maize extracellular 45.72 45.72
GSMUA_Achr11P... Banana extracellular 41.13 44.87
TraesCS7D01G257600.1 Wheat extracellular, vacuole 43.42 44.26
HORVU5Hr1G075510.2 Barley plasma membrane, vacuole 44.68 43.85
Os09t0502200-01 Rice extracellular 43.84 43.75
Os08t0525800-00 Rice extracellular, mitochondrion, vacuole 42.17 43.35
EES14212 Sorghum extracellular 43.63 43.18
Zm00001d031571_P001 Maize extracellular 42.8 42.53
GSMUA_AchrUn_... Banana extracellular, vacuole 40.08 42.29
TraesCS7B01G153600.1 Wheat vacuole 43.42 42.19
TraesCS7A01G256800.1 Wheat vacuole 43.01 41.7
Os03t0845600-01 Rice extracellular, vacuole 40.29 40.72
TraesCS5D01G400400.1 Wheat extracellular 40.71 39.47
Zm00001d004763_P001 Maize extracellular 38.62 39.19
CDX74052 Canola vacuole 45.93 38.8
TraesCS5A01G390600.1 Wheat extracellular 39.87 38.66
HORVU5Hr1G095380.1 Barley cytosol 24.84 37.9
EER90524 Sorghum extracellular 38.2 37.89
TraesCS5B01G279000.2 Wheat extracellular 43.84 37.7
CDY18049 Canola extracellular, vacuole 32.78 35.52
CDY56498 Canola extracellular, vacuole 32.57 35.29
CDY13362 Canola extracellular, vacuole 30.06 34.78
CDX92794 Canola endoplasmic reticulum, extracellular 32.36 34.37
CDY53692 Canola extracellular 32.15 34.3
CDY62387 Canola extracellular 31.94 34.08
CDY46679 Canola extracellular, vacuole 31.52 33.86
CDX99881 Canola extracellular, vacuole 26.51 33.6
CDX76097 Canola extracellular 31.32 33.26
CDY20153 Canola plasma membrane 27.14 33.25
CDY21869 Canola plasma membrane 27.14 33.25
CDY26296 Canola extracellular, plasma membrane, vacuole 27.56 33.08
CDY02936 Canola extracellular 31.11 32.96
CDY06601 Canola endoplasmic reticulum, extracellular 30.9 32.96
CDY17308 Canola extracellular, vacuole 30.9 32.96
CDY20780 Canola extracellular, vacuole 30.9 32.96
CDY40218 Canola extracellular 31.11 32.89
CDX67530 Canola extracellular 29.23 32.79
CDY19908 Canola extracellular, vacuole 31.32 32.68
CDY40219 Canola extracellular 30.69 32.67
CDY53600 Canola extracellular 30.69 32.67
CDY41232 Canola extracellular 30.69 32.59
CDX76528 Canola extracellular, vacuole 26.93 32.58
CDY20461 Canola extracellular 30.48 32.44
CDX93815 Canola extracellular 27.97 32.37
CDY41234 Canola extracellular 30.69 32.31
CDY69080 Canola extracellular 28.18 32.3
CDX90405 Canola vacuole 26.72 32.24
CDY01532 Canola vacuole 26.51 31.99
CDY63842 Canola golgi, vacuole 19.21 31.94
CDY34065 Canola extracellular, vacuole 26.93 31.93
CDY04498 Canola extracellular, vacuole 25.68 31.87
CDX87130 Canola vacuole 30.9 31.83
CDX83270 Canola extracellular, vacuole 25.89 31.79
CDY31181 Canola extracellular, vacuole 25.89 31.79
CDY36734 Canola extracellular, vacuole 30.48 31.74
CDY12009 Canola extracellular, vacuole 30.27 31.52
CDX90225 Canola vacuole 26.51 31.36
CDX78840 Canola vacuole 26.1 31.17
CDX99476 Canola vacuole 26.1 31.17
CDY19838 Canola extracellular, vacuole 30.27 31.05
CDY38531 Canola golgi, vacuole 24.63 30.89
CDY16440 Canola extracellular 32.36 30.75
CDY58676 Canola extracellular, vacuole 32.36 30.75
CDY32869 Canola endoplasmic reticulum, extracellular, plasma membrane 32.15 30.62
CDY64970 Canola extracellular, plasma membrane, vacuole 32.15 30.62
CDY09427 Canola extracellular 31.73 30.58
CDX83243 Canola vacuole 24.01 30.42
CDY48807 Canola extracellular 31.52 30.38
CDY14214 Canola endoplasmic reticulum, extracellular, vacuole 32.15 30.02
CDY26761 Canola vacuole 31.94 29.88
CDY62033 Canola extracellular, plasma membrane, vacuole 33.19 29.83
CDY37244 Canola vacuole 31.52 29.49
CDY31214 Canola vacuole 31.73 29.12
CDY68826 Canola cytosol, endoplasmic reticulum, peroxisome 25.68 29.01
CDY21013 Canola extracellular 31.11 28.71
CDY59252 Canola extracellular, plasma membrane, vacuole 24.43 28.68
CDY06818 Canola extracellular, plasma membrane, vacuole 29.65 28.29
CDX75437 Canola extracellular, plasma membrane, vacuole 29.85 28.26
CDY22386 Canola extracellular, vacuole 25.47 28.24
CDX71547 Canola extracellular, vacuole 25.68 28.21
CDX69064 Canola extracellular, plasma membrane, vacuole 29.65 28.12
CDY23618 Canola endoplasmic reticulum, plasma membrane, vacuole 24.01 27.32
CDY30112 Canola cytosol 23.8 26.95
CDX71449 Canola plasma membrane, vacuole 25.47 26.87
CDX97707 Canola plastid 24.63 21.49
Protein Annotations
KEGG:00500+3.2.1.39Gene3D:3.20.20.80MapMan:50.3.2GO:A0A078FGM5UniProt:A0A078FGM5EnsemblPlants:CDY12371
ProteinID:CDY12371ProteinID:CDY12371.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0016798EnsemblPlantsGene:GSBRNA2T00061568001InterPro:Glyco_hydro_17
InterPro:Glycoside_hydrolase_SFPFAM:PF00332PFAM:PF07983ScanProsite:PS00587PANTHER:PTHR32227PANTHER:PTHR32227:SF122
SMART:SM00768SUPFAM:SSF51445SignalP:SignalP-noTMUniParc:UPI0004EBBBE9InterPro:X8SEG:seg
Description
BnaC08g08340DBnaC08g08340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FGM5]
Coordinates
chrLK032021:+:274350..277905
Molecular Weight (calculated)
53523.2 Da
IEP (calculated)
8.915
GRAVY (calculated)
-0.175
Length
479 amino acids
Sequence
(BLAST)
001: MSGVAFFLFT LIYFSSSCCS AARFQHRHRY MERKLMIALA SKIGINYGRQ GKDLPSPYQS INFIKSIKAG HVKLYDADPE TLTLLSHTNL YVSITVHNHQ
101: ITSLGTNQTT AEDWVKTNIL PYYPQTQIRF VLVGNEILSV QDRNITANLV PAMRKIVNAL RAHGIHNIKV GTPLPMDSLR STFPPSNSTF REDIAGPLML
201: PLLKFLNGTN SYFFINLQPY YRWLRNPMNT SLDFALFQGN STYTDPRTGL VYHNLVDQML DSVILAMIKL GYPHIRIAIS ETGWPNSGDI DETGANILNA
301: ATYNRNLIKK MTAIPPIGTP ARPALPIPTF VFSLFNENQK SGSGTQRHWG ILHPDGTPIY DIDFTGQKPL TGFNPLPKPT NNVPYKGQVW CVLVEGANEA
401: ELEEALRIAC GRSNTTCAAL APGKECYDPV SIYWHASYAV SSYWAQFRTQ NVGCYFNGLA HESTINPGND RCKFPSVTL
Best Arabidopsis Sequence Match ( AT4G14080.1 )
(BLAST)
001: MSLLAFFLFT ILVFSSSCCS ATRFQGHRYM QRKTMLDLAS KIGINYGRRG NNLPSPYQSI NFIKSIKAGH VKLYDADPES LTLLSQTNLY VTITVPNHQI
101: TALSSNQTIA DEWVRTNILP YYPQTQIRFV LVGNEILSYN SGNVSVNLVP AMRKIVNSLR LHGIHNIKVG TPLAMDSLRS SFPPSNGTFR EEITGPVMLP
201: LLKFLNGTNS YFFLNVHPYF RWSRNPMNTS LDFALFQGHS TYTDPQTGLV YRNLLDQMLD SVLFAMTKLG YPHMRLAISE TGWPNFGDID ETGANILNAA
301: TYNRNLIKKM SASPPIGTPS RPGLPIPTFV FSLFNENQKS GSGTQRHWGI LHPDGSPIYD VDFTGQTPLT GFNPLPKPTN NVPYKGQVWC VPVEGANETE
401: LEETLRMACA QSNTTCAALA PGRECYEPVS IYWHASYALN SYWAQFRNQS IQCFFNGLAH ETTTNPGNDR CKFPSVTL
Arabidopsis Description
A6Probable glucan endo-1,3-beta-glucosidase A6 [Source:UniProtKB/Swiss-Prot;Acc:Q06915]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.