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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d004763_P001 Maize extracellular 76.19 77.97
Os03t0845600-01 Rice extracellular, vacuole 74.95 76.37
TraesCS5D01G400400.1 Wheat extracellular 76.19 74.49
TraesCS5A01G390600.1 Wheat extracellular 75.57 73.89
HORVU5Hr1G095380.1 Barley cytosol 40.99 63.06
GSMUA_Achr8P08800_001 Banana peroxisome, plastid, vacuole 46.58 57.84
EES14212 Sorghum extracellular 54.87 54.75
GSMUA_Achr11P... Banana extracellular 46.79 51.48
EER99139 Sorghum endoplasmic reticulum, plasma membrane 51.35 51.35
GSMUA_AchrUn_... Banana extracellular, vacuole 45.76 48.68
KRH46623 Soybean nucleus 45.96 47.54
KRG99621 Soybean nucleus 44.93 46.47
VIT_05s0062g01430.t01 Wine grape extracellular, vacuole 44.72 46.25
CDY08004 Canola vacuole 43.89 46.09
PGSC0003DMT400022520 Potato extracellular, vacuole 43.69 45.47
Solyc09g057630.2.1 Tomato nucleus 43.69 45.47
Bra029639.1-P Field mustard vacuole 43.27 45.43
CDY28063 Canola vacuole 43.27 45.43
CDY24629 Canola vacuole 43.06 45.22
CDY45466 Canola vacuole 42.65 44.78
AT3G07320.1 Thale cress extracellular, vacuole 42.44 44.57
CDY67322 Canola extracellular 20.29 44.34
Solyc12g098560.1.1 Tomato extracellular 41.61 43.79
AT3G23770.1 Thale cress extracellular 42.03 42.65
CDY50110 Canola extracellular, vacuole 41.41 42.02
Bra028343.1-P Field mustard extracellular, vacuole 41.2 41.81
CDY18092 Canola extracellular, vacuole 41.2 41.81
KRH20365 Soybean extracellular, vacuole 33.54 41.43
CDY53213 Canola extracellular, vacuole 40.79 41.04
CDY59775 Canola extracellular, vacuole 40.17 40.93
Bra014979.1-P Field mustard extracellular, vacuole 40.37 40.8
Bra001918.1-P Field mustard extracellular, vacuole 40.37 40.62
CDY63754 Canola extracellular, vacuole 39.96 40.38
AT4G14080.1 Thale cress vacuole 39.75 40.17
Bra037057.1-P Field mustard extracellular, vacuole 39.34 39.67
CDY06469 Canola extracellular 39.13 39.46
CDY08310 Canola extracellular, vacuole 38.92 39.25
Bra032758.1-P Field mustard vacuole 38.72 38.96
CDY01191 Canola extracellular, vacuole 38.72 38.96
CDY12732 Canola extracellular, vacuole 38.3 38.54
EES01795 Sorghum extracellular, plasma membrane, vacuole 32.51 38.48
CDY12371 Canola extracellular, vacuole 37.89 38.2
CDY27122 Canola extracellular, vacuole 37.47 37.79
EES18301 Sorghum golgi, plasma membrane, vacuole 31.88 37.56
EES07606 Sorghum extracellular, vacuole 38.1 37.47
KXG19201 Sorghum plastid 35.2 36.64
Bra001245.1-P Field mustard vacuole 42.86 36.57
CDX74052 Canola vacuole 42.86 36.51
EES10741 Sorghum golgi, plasma membrane, vacuole 30.43 35.85
EES13119 Sorghum extracellular, vacuole 34.37 35.78
EES05179 Sorghum plastid 30.23 35.7
KXG37872 Sorghum endoplasmic reticulum, extracellular, vacuole 34.99 35.58
EER88444 Sorghum extracellular, vacuole 30.02 35.54
Bra038969.1-P Field mustard extracellular, vacuole 36.65 35.05
KXG38664 Sorghum extracellular, vacuole 30.85 34.33
EES10308 Sorghum endoplasmic reticulum, extracellular, vacuole 32.92 34.05
EER95211 Sorghum extracellular, vacuole 30.23 33.8
EER99488 Sorghum extracellular, vacuole 34.78 33.6
EER88625 Sorghum extracellular, plasma membrane, vacuole 27.12 33.42
KXG29738 Sorghum golgi, mitochondrion, vacuole 28.57 32.86
EER93548 Sorghum vacuole 30.02 32.58
EER95256 Sorghum extracellular, plasma membrane, vacuole 32.92 31.67
EES01451 Sorghum extracellular, plasma membrane, vacuole 31.47 30.58
KXG36295 Sorghum plasma membrane 33.33 29.76
KXG34744 Sorghum vacuole 30.02 28.66
EER99489 Sorghum extracellular, vacuole 33.54 27.88
KXG36404 Sorghum vacuole 31.68 26.98
OQU90151 Sorghum vacuole 27.54 26.92
EER99491 Sorghum extracellular, vacuole 34.58 25.26
OQU92921 Sorghum mitochondrion 32.3 14.26
Protein Annotations
KEGG:00500+3.2.1.39Gene3D:3.20.20.80MapMan:50.3.2EntrezGene:8060882UniProt:C5WSY5EnsemblPlants:EER90524
ProteinID:EER90524ProteinID:EER90524.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005488
GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0016020GO:GO:0016787GO:GO:0016798GO:GO:0030246GO:GO:0030247GO:GO:0046658
InterPro:Glyco_hydro_17InterPro:Glycoside_hydrolase_SFPFAM:PF00332PFAM:PF07983ScanProsite:PS00587PANTHER:PTHR32227
PANTHER:PTHR32227:SF238SMART:SM00768EnsemblPlantsGene:SORBI_3001G014700SUPFAM:SSF51445SignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0001A82540InterPro:X8RefSeq:XP_002463526.1SEG:seg::
Description
hypothetical protein
Coordinates
chr1:+:1320010..1323238
Molecular Weight (calculated)
51212.0 Da
IEP (calculated)
7.981
GRAVY (calculated)
0.080
Length
483 amino acids
Sequence
(BLAST)
001: MATPLHLLLV LAAIVTAATP SCVAAAASSA ASTAEHILGV NYGTLGDNLP LPQRGLELAR SAGASAVRFY DANATMLAAA AASGLEFVPS VPNELIPSLA
101: ASQRAADAWV ATTLLPFRGN PRLRYLFVGN EVLSDPTARS RWPRLVPAMA NVHRALHRHG LGSVKVSTTF SMHELEGQNV FPPSAGAFRP DIAGAVVRPL
201: LAFLDRTGSP LFVDAYTYFT WSANHTVVPL PYALLAPASG YVYRDPGTGL SYTNLLDQML DAVVAAMCRA GHCGVGLALA ETGWPTAGDL DQFGANVRNA
301: ATYNRNLARH LASGAGTPRR PRARVAPAMV FALFNEDLKW GPGTERHWGL FYPNGSAVYE VDLTGRRRSL PSYPPLPPAS NDRPYPGPLW CVVATDKGPV
401: NETAVRAQVA AACADVPGLC DPVRPGGACF LPDTVSAHAS YVFSAHWNRF SEDYGGCYFA GFAVETTVDP SHGSCKFPSI LLK
Best Arabidopsis Sequence Match ( AT3G07320.1 )
(BLAST)
001: MSLLLHLFAL SLLISVSGAK FSGRPGINYG QLGNNLPSPS DSVNLIKSLN AKRVKLYDAN PKILAALNGT DITVSVMVPN ELLVNISKSA SLSDDWIRSN
101: ILPFYPTTKI RYLLVGNEIL SLPDSELKSS LVPAMRKIQR SLKSLGVKKV KVGTTLATDV LQSSFPPSSG EFREDISGLI MKPMLQFLNR TKSFLFVDVY
201: PYFAWAQDPT HVDLDYAIFE STNVTVTDPV SNLTYHNLFD QMIDAFVFAM KRVGYPDIRI WVAETGWPNN GDYDQIGANI YNAATYNRNV VKKLAADPPV
301: GTPARPGKVL PAFVFALYNE NQKTGPGTER HFGLLHPNGT QVYGIDLSGK TEYKESLPAP ENNDLYKGKI WCVVAKGANW TQLGDALSYA CSQGNNTCDP
401: IQRGGPCQKP DLTVLHASYA FSSYWAQFRK IGGTCSFNGL ATQTIKDPSY GRCEFPSVTL
Arabidopsis Description
O-Glycosyl hydrolases family 17 protein [Source:UniProtKB/TrEMBL;Acc:Q9SRT4]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.