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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 7
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER99489 Sorghum extracellular, vacuole 69.84 68.16
EER99488 Sorghum extracellular, vacuole 51.32 58.2
TraesCS1D01G430700.1 Wheat extracellular, vacuole 57.67 58.08
TraesCS1D01G431300.1 Wheat vacuole 58.73 58.01
TraesCS1D01G431200.1 Wheat extracellular, vacuole 56.79 57.71
TraesCS1B01G453900.1 Wheat vacuole 58.02 57.62
TraesCS1A01G422900.1 Wheat extracellular, vacuole 56.61 57.53
HORVU1Hr1G092310.2 Barley extracellular 56.97 57.17
TraesCS2B01G241200.3 Wheat endoplasmic reticulum, extracellular, vacuole 56.44 57.14
TraesCS7B01G285700.2 Wheat extracellular 56.26 57.07
TraesCS1A01G422500.1 Wheat vacuole 57.32 57.02
EER99491 Sorghum extracellular, vacuole 66.31 56.88
HORVU2Hr1G044450.4 Barley extracellular, vacuole 56.26 56.86
TraesCS1B01G454500.1 Wheat vacuole 55.73 56.33
TraesCS2D01G221800.1 Wheat extracellular, vacuole 54.32 56.0
TraesCS2A01G216200.1 Wheat extracellular, vacuole 54.14 55.72
HORVU7Hr1G091100.3 Barley vacuole 55.56 55.46
Os07t0538000-01 Rice extracellular 54.5 55.38
TraesCS2B01G241300.1 Wheat extracellular, vacuole 53.79 55.35
Os07t0539400-00 Rice extracellular, plastid, vacuole 50.79 55.28
Zm00001d021695_P001 Maize extracellular 61.9 54.25
HORVU2Hr1G044460.2 Barley vacuole 52.73 53.97
Os07t0539100-01 Rice extracellular 52.56 53.89
Zm00001d006538_P001 Maize vacuole 61.38 53.62
HORVU1Hr1G092240.3 Barley extracellular, vacuole 55.38 53.49
TraesCS1B01G454200.1 Wheat extracellular, vacuole 37.74 53.37
Os08t0244500-00 Rice extracellular 52.38 52.75
EES07606 Sorghum extracellular, vacuole 45.33 52.34
Os07t0539300-01 Rice extracellular 52.03 51.13
GSMUA_Achr9P16150_001 Banana cytosol, extracellular, plastid, vacuole 36.68 50.86
GSMUA_Achr8P22560_001 Banana extracellular, vacuole 37.39 50.36
Os07t0539900-01 Rice extracellular 52.91 49.83
TraesCS5A01G338400.3 Wheat endoplasmic reticulum, extracellular, vacuole 43.21 49.7
HORVU5Hr1G084900.2 Barley endoplasmic reticulum, extracellular, vacuole 40.74 48.02
CDY56498 Canola extracellular, vacuole 36.68 47.06
VIT_12s0059g01320.t01 Wine grape extracellular, vacuole 38.98 46.92
CDY20780 Canola extracellular, vacuole 37.04 46.77
CDY17308 Canola extracellular, vacuole 37.04 46.77
CDY06601 Canola endoplasmic reticulum, extracellular 37.04 46.77
CDY18049 Canola extracellular, vacuole 36.33 46.61
Bra035561.1-P Field mustard extracellular, vacuole 37.74 46.52
CDY36734 Canola extracellular, vacuole 37.57 46.3
CDY19908 Canola extracellular, vacuole 37.39 46.19
CDX92794 Canola endoplasmic reticulum, extracellular 36.68 46.12
Bra002927.1-P Field mustard extracellular, vacuole 37.57 46.0
AT4G26830.2 Thale cress endoplasmic reticulum, extracellular 37.21 45.97
CDY46679 Canola extracellular, vacuole 36.16 45.96
CDY12009 Canola extracellular, vacuole 37.04 45.65
PGSC0003DMT400033482 Potato extracellular, vacuole 38.1 45.57
AT2G05790.1 Thale cress extracellular, vacuole 37.92 45.55
AT5G55180.2 Thale cress endoplasmic reticulum, extracellular 37.21 45.38
KRH14333 Soybean endoplasmic reticulum, extracellular 36.86 45.34
VIT_19s0090g01070.t01 Wine grape extracellular, plasma membrane, vacuole 37.21 44.8
KRH73795 Soybean extracellular, vacuole 37.21 44.7
Bra015166.1-P Field mustard extracellular, vacuole 37.21 44.61
Solyc12g014420.1.1 Tomato extracellular 37.57 44.38
Solyc07g049370.2.1 Tomato extracellular, vacuole 36.16 43.8
PGSC0003DMT400001833 Potato extracellular, vacuole 36.16 43.8
KRH14776 Soybean extracellular, vacuole 36.68 43.61
KRH73361 Soybean extracellular, vacuole 36.16 43.43
Bra019084.1-P Field mustard endoplasmic reticulum, extracellular 36.68 42.19
PGSC0003DMT400033484 Potato extracellular, vacuole 29.45 41.85
EES01795 Sorghum extracellular, plasma membrane, vacuole 26.98 37.5
EER88444 Sorghum extracellular, vacuole 26.81 37.25
Bra028988.1-P Field mustard extracellular, vacuole 36.86 36.35
EER99139 Sorghum endoplasmic reticulum, plasma membrane 30.86 36.23
EES14212 Sorghum extracellular 30.51 35.74
EES18301 Sorghum golgi, plasma membrane, vacuole 25.75 35.61
EER88625 Sorghum extracellular, plasma membrane, vacuole 24.16 34.95
KXG37872 Sorghum endoplasmic reticulum, extracellular, vacuole 29.1 34.74
EER95256 Sorghum extracellular, plasma membrane, vacuole 30.69 34.66
EES01451 Sorghum extracellular, plasma membrane, vacuole 30.34 34.61
EES05179 Sorghum plastid 24.69 34.23
EES13119 Sorghum extracellular, vacuole 27.87 34.05
KXG29738 Sorghum golgi, mitochondrion, vacuole 24.87 33.57
EES10741 Sorghum golgi, plasma membrane, vacuole 23.81 32.93
EES10308 Sorghum endoplasmic reticulum, extracellular, vacuole 26.98 32.76
KXG38664 Sorghum extracellular, vacuole 25.04 32.72
OQU90151 Sorghum vacuole 28.4 32.59
EER90524 Sorghum extracellular 26.98 31.68
KXG19201 Sorghum plastid 25.75 31.47
KXG36295 Sorghum plasma membrane 29.1 30.5
EER93548 Sorghum vacuole 22.75 28.99
EER95211 Sorghum extracellular, vacuole 21.69 28.47
KXG34744 Sorghum vacuole 23.99 26.88
OQU92921 Sorghum mitochondrion 26.45 13.71
Protein Annotations
KEGG:00500+3.2.1.39Gene3D:3.20.20.80MapMan:50.3.2UniProt:A0A1B6QEQ7GO:GO:0003674GO:GO:0003824
GO:GO:0004553GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016787InterPro:Glyco_hydro_17
InterPro:Glycoside_hydrolase_SFEnsemblPlants:KXG36404ProteinID:KXG36404ProteinID:KXG36404.1PFAM:PF00332PFAM:PF07983
PANTHER:PTHR32227PANTHER:PTHR32227:SF235SMART:SM00768EnsemblPlantsGene:SORBI_3002G327900SUPFAM:SSF51445SignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI000220712AInterPro:X8SEG:seg::
Description
hypothetical protein
Coordinates
chr2:+:69745886..69752061
Molecular Weight (calculated)
60546.9 Da
IEP (calculated)
5.179
GRAVY (calculated)
-0.144
Length
567 amino acids
Sequence
(BLAST)
001: MQHIMAFTRL LVVLLGAAFP LLLLFSPAVA SELGVSYGRV ANDLPDPSSV VKLLGDNGIT MVRIYDANSN VLSSLANTGI KVMVMLPNEN LADAASSSDK
101: ALQWVQNNVA AYYPATNIHG VAVGNEVFNS KPDQNLNLVP AMTNIQKALA QLNLADAIKV TTPIAFNAVA VSWPPSSGAF GDDIAQLVMK PMLQFLQQTG
201: SYLSVNYYPY LTYMAQPDTF NLDYVLGNNP NPGAVDPDTQ FKYNSLLDAQ RDATYYAMDK LGASYSNMAV HHTEHGAPSG GSLRGGGGGH RRLLQAGGVA
301: TIANAQTYIN NLMNRVLSGN TGTPHRPNAD MNVYIFALFN EDQKGTGAGD VEQHFGLFYP NMQKVYEFDF RGGGVPPAPG AESWCVANAS VGESWLQAAL
401: EYACGHGADC SAIQPGAACF EPDTVVAHAS YAFNSYYQRN GRSNGTCDFN GAGYIVYQEP AGTCDPNASW CVANAEVGDA RLQNALDYAC GNGADCSAIQ
501: PGGQCFQPDT KPSHASYAFN SYYQHKGRAS GTCDFSGAAS VVYQQPSEST GFLTRRHFLS PCPQTFV
Best Arabidopsis Sequence Match ( AT2G05790.1 )
(BLAST)
001: MDLLTPLIFL LLLLSPFSLS DAGSIGVNYG RISDELPSAF KVVQLLKSQG ITRVKIFDAD PSVLKALSGS GIKVTVDLPN ELLFSAAKRT SFAVSWVKRN
101: VAAYHPSTQI ESIAVGNEVF VDTHNTTSFL IPAMRNIHKA LMSFNLHSDI KISSPLALSA LQNSYPSSSG SFRPELIDSV IKPMLDFLRE TGSRLMINVY
201: PFFAYEGNSD VIPLDYALLR ENPGMVDSGN GLRYFNLFDA QIDAVFAAMS ALKYDDIEII VTETGWPSKG DENEVGATLA NAASYNGNLI RRILTRGGTP
301: LRPKADLTVY LFALFNENKK LGPTSERNYG LFFPDEKKVY DIPFTTEGLK HYRDGGHTPV TGGDQVTKPP MSGGVSKSLN GYTWCVANGD AGEERLQGGL
401: DYACGEGGAD CRPIQPGANC YSPDTLEAHA SFAFNSYYQK KGRAGGSCYF GGAAYVVSQP PKYGRCEFPT GY
Arabidopsis Description
O-Glycosyl hydrolases family 17 protein [Source:UniProtKB/TrEMBL;Acc:F4IHD3]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.