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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 3
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, vacuole
Any Predictor:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
TargetP:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G338400.3 Wheat endoplasmic reticulum, extracellular, vacuole 90.02 87.83
HORVU7Hr1G091100.3 Barley vacuole 56.13 47.54
GSMUA_Achr9P16150_001 Banana cytosol, extracellular, plastid, vacuole 39.5 46.45
EER99488 Sorghum extracellular, vacuole 48.23 46.4
HORVU2Hr1G044450.4 Barley extracellular, vacuole 53.64 45.99
CDY56498 Canola extracellular, vacuole 42.2 45.93
GSMUA_Achr8P22560_001 Banana extracellular, vacuole 39.92 45.61
HORVU2Hr1G044460.2 Barley vacuole 52.39 45.49
CDY18049 Canola extracellular, vacuole 41.79 45.48
CDY06601 Canola endoplasmic reticulum, extracellular 42.2 45.21
Os07t0538000-01 Rice extracellular 52.39 45.16
CDY20780 Canola extracellular, vacuole 41.79 44.77
CDY17308 Canola extracellular, vacuole 41.58 44.54
CDY36734 Canola extracellular, vacuole 42.2 44.13
CDY19908 Canola extracellular, vacuole 41.79 43.79
CDY12009 Canola extracellular, vacuole 41.79 43.7
Bra035561.1-P Field mustard extracellular, vacuole 41.79 43.7
AT2G05790.1 Thale cress extracellular, vacuole 42.83 43.64
Os07t0539400-00 Rice extracellular, plastid, vacuole 46.99 43.38
VIT_12s0059g01320.t01 Wine grape extracellular, vacuole 42.41 43.31
Bra015166.1-P Field mustard extracellular, vacuole 42.41 43.13
CDY46679 Canola extracellular, vacuole 39.92 43.05
KRH73361 Soybean extracellular, vacuole 42.2 43.01
Zm00001d021690_P001 Maize extracellular 51.98 42.81
KRH14776 Soybean extracellular, vacuole 42.41 42.77
KRH14333 Soybean endoplasmic reticulum, extracellular 40.96 42.73
AT4G26830.2 Thale cress endoplasmic reticulum, extracellular 40.75 42.7
HORVU1Hr1G092310.2 Barley extracellular 49.9 42.48
CDX92794 Canola endoplasmic reticulum, extracellular 39.71 42.35
Bra002927.1-P Field mustard extracellular, vacuole 40.75 42.33
Solyc07g049370.2.1 Tomato extracellular, vacuole 41.16 42.31
VIT_19s0090g01070.t01 Wine grape extracellular, plasma membrane, vacuole 41.37 42.25
EER99489 Sorghum extracellular, vacuole 50.94 42.17
HORVU1Hr1G092240.3 Barley extracellular, vacuole 51.14 41.91
PGSC0003DMT400001833 Potato extracellular, vacuole 40.75 41.88
Os07t0539100-01 Rice extracellular 47.82 41.59
KRH73795 Soybean extracellular, vacuole 40.75 41.53
AT5G55180.2 Thale cress endoplasmic reticulum, extracellular 40.12 41.51
PGSC0003DMT400033482 Potato extracellular, vacuole 40.33 40.93
KXG36404 Sorghum vacuole 48.02 40.74
Os08t0244500-00 Rice extracellular 47.4 40.5
Solyc12g014420.1.1 Tomato extracellular 40.12 40.21
Os07t0539300-01 Rice extracellular 47.61 39.69
PGSC0003DMT400033484 Potato extracellular, vacuole 32.64 39.35
Os07t0539900-01 Rice extracellular 48.44 38.7
Bra019084.1-P Field mustard endoplasmic reticulum, extracellular 39.5 38.54
HORVU6Hr1G079630.2 Barley mitochondrion, plastid, vacuole 43.04 38.26
Zm00001d006538_P001 Maize vacuole 50.31 37.29
EER99491 Sorghum extracellular, vacuole 50.94 37.07
HORVU1Hr1G010910.2 Barley extracellular, vacuole 30.77 35.92
HORVU5Hr1G075510.2 Barley plasma membrane, vacuole 36.38 35.86
Zm00001d021695_P001 Maize extracellular 47.82 35.55
Bra028988.1-P Field mustard extracellular, vacuole 42.0 35.13
HORVU2Hr1G102010.1 Barley golgi, mitochondrion, vacuole 24.95 34.09
HORVU3Hr1G070400.1 Barley extracellular, vacuole 32.43 34.06
Zm00001d021697_P001 Maize extracellular 49.06 33.96
HORVU3Hr1G084170.1 Barley extracellular, vacuole 28.69 33.58
HORVU1Hr1G011210.1 Barley vacuole 29.94 33.49
HORVU2Hr1G036980.5 Barley plasma membrane 33.89 33.13
HORVU4Hr1G008950.1 Barley vacuole 27.86 32.13
HORVU7Hr1G079650.7 Barley extracellular, vacuole 29.31 32.12
HORVU7Hr1G012550.1 Barley vacuole 29.52 31.77
HORVU5Hr1G048630.2 Barley plasma membrane, vacuole 32.64 31.65
HORVU4Hr1G063240.7 Barley golgi, vacuole 28.48 31.64
HORVU4Hr1G067180.3 Barley extracellular, vacuole 33.06 31.55
HORVU4Hr1G027740.1 Barley vacuole 32.64 31.46
HORVU1Hr1G073820.3 Barley mitochondrion, peroxisome, plastid, vacuole 29.73 31.43
HORVU4Hr1G003090.3 Barley extracellular, vacuole 34.72 31.16
HORVU3Hr1G067280.5 Barley plasma membrane 27.23 30.75
HORVU4Hr1G065340.1 Barley extracellular, vacuole 27.44 30.63
HORVU3Hr1G070440.12 Barley plastid 33.06 30.58
HORVU0Hr1G021950.4 Barley golgi, vacuole 25.36 30.5
HORVU6Hr1G032490.1 Barley plastid 27.65 29.82
HORVU5Hr1G083710.1 Barley golgi, mitochondrion, vacuole 28.9 27.63
HORVU5Hr1G095380.1 Barley cytosol 17.46 26.75
HORVU2Hr1G072890.1 Barley mitochondrion 28.48 25.66
HORVU2Hr1G047410.3 Barley vacuole 18.71 14.93
Protein Annotations
KEGG:00500+3.2.1.39Gene3D:3.20.20.80MapMan:50.3.2UniProt:A0A287S2W4GO:GO:0003674GO:GO:0003824
GO:GO:0004553GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016787InterPro:Glyco_hydro_17
InterPro:Glycoside_hydrolase_SFEnsemblPlantsGene:HORVU5Hr1G084900EnsemblPlants:HORVU5Hr1G084900.2PFAM:PF00332PFAM:PF07983PANTHER:PTHR32227
PANTHER:PTHR32227:SF235SMART:SM00768SUPFAM:SSF51445SignalP:SignalP-noTMUniParc:UPI000B484EB7InterPro:X8
SEG:seg:::::
Description
No Description!
Coordinates
chrchr5H:+:573580036..573583228
Molecular Weight (calculated)
51577.0 Da
IEP (calculated)
5.797
GRAVY (calculated)
-0.153
Length
481 amino acids
Sequence
(BLAST)
001: MALPKLLLLL LVVGGALSLT FFPGSEAGDV GVCYGMMGDN LPQPPAVVQL LKQHGITMVR LFNADAGGLR ALANTGIKVG VSLPNDNVAE AASSMSYAVR
101: WVQSNVQAYP GTWIDSVSVG NEVFHQAPWL THQLLPAMKN IQAALAGAGL GDAVKVVTPI AMDALKVPSF PPSVGEFRDD LAWSVMRPMV DFLEQTGSHL
201: TFNVYPYFAY KYDSHVDPDF AFFRPNNGQH DPGTGLTYFN LFDAMVDAVF HAVEKLGNSG GRTRGRRRGG VTSTMGVPES GAPAGKGKTG VALAGSASTE
301: NARAYNSNLI SKVLRGAGTP YNPDADISVY IFSLFNENLK PGDDDERNFG LFYPNGTQVY DVDFTRPGPE PEGPSWCVAN AAVGDGRLRD ALDYACGHGA
401: DCSGIQPGGW CFDPNTMVAH ASYAFNDYYQ RNGRSEEACR FGGCGSVVHQ QPRFGNCVLP QWRDGLKRLG GPPYVQLSQD L
Best Arabidopsis Sequence Match ( AT2G05790.1 )
(BLAST)
001: MDLLTPLIFL LLLLSPFSLS DAGSIGVNYG RISDELPSAF KVVQLLKSQG ITRVKIFDAD PSVLKALSGS GIKVTVDLPN ELLFSAAKRT SFAVSWVKRN
101: VAAYHPSTQI ESIAVGNEVF VDTHNTTSFL IPAMRNIHKA LMSFNLHSDI KISSPLALSA LQNSYPSSSG SFRPELIDSV IKPMLDFLRE TGSRLMINVY
201: PFFAYEGNSD VIPLDYALLR ENPGMVDSGN GLRYFNLFDA QIDAVFAAMS ALKYDDIEII VTETGWPSKG DENEVGATLA NAASYNGNLI RRILTRGGTP
301: LRPKADLTVY LFALFNENKK LGPTSERNYG LFFPDEKKVY DIPFTTEGLK HYRDGGHTPV TGGDQVTKPP MSGGVSKSLN GYTWCVANGD AGEERLQGGL
401: DYACGEGGAD CRPIQPGANC YSPDTLEAHA SFAFNSYYQK KGRAGGSCYF GGAAYVVSQP PKYGRCEFPT GY
Arabidopsis Description
O-Glycosyl hydrolases family 17 protein [Source:UniProtKB/TrEMBL;Acc:F4IHD3]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.