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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 6
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d021690_P001 Maize extracellular 85.8 73.46
EER99489 Sorghum extracellular, vacuole 63.2 54.39
EES07606 Sorghum extracellular, vacuole 53.0 53.97
KXG36404 Sorghum vacuole 58.2 51.32
GSMUA_Achr9P16150_001 Banana cytosol, extracellular, plastid, vacuole 41.6 50.86
EER99491 Sorghum extracellular, vacuole 64.4 48.71
TraesCS1B01G454200.1 Wheat extracellular, vacuole 39.0 48.63
GSMUA_Achr8P22560_001 Banana extracellular, vacuole 40.8 48.46
HORVU5Hr1G084900.2 Barley endoplasmic reticulum, extracellular, vacuole 46.4 48.23
TraesCS7B01G285700.2 Wheat extracellular 53.8 48.12
TraesCS5A01G338400.3 Wheat endoplasmic reticulum, extracellular, vacuole 47.4 48.07
CDY20780 Canola extracellular, vacuole 42.6 47.44
CDY17308 Canola extracellular, vacuole 42.2 46.99
CDY06601 Canola endoplasmic reticulum, extracellular 42.2 46.99
Os07t0538000-01 Rice extracellular 52.4 46.95
TraesCS1A01G422900.1 Wheat extracellular, vacuole 52.2 46.77
Bra035561.1-P Field mustard extracellular, vacuole 42.6 46.3
CDY36734 Canola extracellular, vacuole 42.6 46.3
CDY12009 Canola extracellular, vacuole 42.4 46.09
TraesCS1B01G454500.1 Wheat vacuole 51.6 45.99
TraesCS1D01G430700.1 Wheat extracellular, vacuole 51.6 45.83
TraesCS1D01G431300.1 Wheat vacuole 52.6 45.82
HORVU7Hr1G091100.3 Barley vacuole 52.0 45.77
CDY19908 Canola extracellular, vacuole 42.0 45.75
HORVU1Hr1G092310.2 Barley extracellular 51.6 45.66
CDY56498 Canola extracellular, vacuole 40.2 45.48
TraesCS2B01G241300.1 Wheat extracellular, vacuole 50.0 45.37
TraesCS1B01G453900.1 Wheat vacuole 51.8 45.36
TraesCS2B01G241200.3 Wheat endoplasmic reticulum, extracellular, vacuole 50.8 45.36
TraesCS1D01G431200.1 Wheat extracellular, vacuole 50.6 45.34
CDY18049 Canola extracellular, vacuole 40.0 45.25
TraesCS2A01G216200.1 Wheat extracellular, vacuole 49.8 45.19
CDY46679 Canola extracellular, vacuole 40.2 45.07
CDX92794 Canola endoplasmic reticulum, extracellular 40.6 45.01
Bra002927.1-P Field mustard extracellular, vacuole 41.6 44.92
TraesCS1A01G422500.1 Wheat vacuole 51.2 44.91
TraesCS2D01G221800.1 Wheat extracellular, vacuole 49.4 44.91
HORVU2Hr1G044460.2 Barley vacuole 49.4 44.58
AT5G55180.2 Thale cress endoplasmic reticulum, extracellular 41.4 44.52
VIT_19s0090g01070.t01 Wine grape extracellular, plasma membrane, vacuole 41.8 44.37
HORVU1Hr1G092240.3 Barley extracellular, vacuole 52.0 44.29
KRH14333 Soybean endoplasmic reticulum, extracellular 40.8 44.25
Os08t0244500-00 Rice extracellular 49.8 44.23
HORVU2Hr1G044450.4 Barley extracellular, vacuole 49.6 44.21
VIT_12s0059g01320.t01 Wine grape extracellular, vacuole 41.6 44.16
PGSC0003DMT400033484 Potato extracellular, vacuole 34.8 43.61
AT4G26830.2 Thale cress endoplasmic reticulum, extracellular 39.8 43.36
PGSC0003DMT400033482 Potato extracellular, vacuole 41.0 43.25
KRH73795 Soybean extracellular, vacuole 40.8 43.22
Os07t0539400-00 Rice extracellular, plastid, vacuole 45.0 43.19
Solyc07g049370.2.1 Tomato extracellular, vacuole 40.4 43.16
Os07t0539100-01 Rice extracellular 47.6 43.04
Os07t0539300-01 Rice extracellular 49.6 42.98
KRH73361 Soybean extracellular, vacuole 40.4 42.8
PGSC0003DMT400001833 Potato extracellular, vacuole 40.0 42.73
AT2G05790.1 Thale cress extracellular, vacuole 40.2 42.58
Bra015166.1-P Field mustard extracellular, vacuole 40.2 42.49
Solyc12g014420.1.1 Tomato extracellular 40.4 42.08
KRH14776 Soybean extracellular, vacuole 39.8 41.72
Os07t0539900-01 Rice extracellular 49.4 41.03
Bra019084.1-P Field mustard endoplasmic reticulum, extracellular 40.4 40.97
EES01795 Sorghum extracellular, plasma membrane, vacuole 32.0 39.22
EER88444 Sorghum extracellular, vacuole 31.2 38.24
EES18301 Sorghum golgi, plasma membrane, vacuole 30.2 36.83
EES14212 Sorghum extracellular 35.4 36.57
Bra028988.1-P Field mustard extracellular, vacuole 41.4 36.0
EES13119 Sorghum extracellular, vacuole 33.4 35.99
KXG38664 Sorghum extracellular, vacuole 31.2 35.94
EES10741 Sorghum golgi, plasma membrane, vacuole 29.4 35.85
EER88625 Sorghum extracellular, plasma membrane, vacuole 28.0 35.71
KXG29738 Sorghum golgi, mitochondrion, vacuole 29.8 35.48
EES05179 Sorghum plastid 28.6 34.96
EER90524 Sorghum extracellular 33.6 34.78
EER99139 Sorghum endoplasmic reticulum, plasma membrane 33.0 34.16
KXG37872 Sorghum endoplasmic reticulum, extracellular, vacuole 31.6 33.26
EES01451 Sorghum extracellular, plasma membrane, vacuole 32.8 33.0
KXG19201 Sorghum plastid 30.6 32.97
EES10308 Sorghum endoplasmic reticulum, extracellular, vacuole 30.2 32.33
EER95256 Sorghum extracellular, plasma membrane, vacuole 32.4 32.27
OQU90151 Sorghum vacuole 31.6 31.98
EER93548 Sorghum vacuole 26.6 29.89
EER95211 Sorghum extracellular, vacuole 25.8 29.86
KXG34744 Sorghum vacuole 29.6 29.25
KXG36295 Sorghum plasma membrane 29.6 27.36
OQU92921 Sorghum mitochondrion 32.4 14.81
Protein Annotations
KEGG:00500+3.2.1.39Gene3D:3.20.20.80MapMan:50.3.2EntrezGene:8084081UniProt:C5XAS3EnsemblPlants:EER99488
ProteinID:EER99488ProteinID:EER99488.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005488
GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0016020GO:GO:0016787GO:GO:0030246GO:GO:0030247GO:GO:0046658InterPro:Glyco_hydro_17
InterPro:Glycoside_hydrolase_SFPFAM:PF00332PFAM:PF07983PANTHER:PTHR32227PANTHER:PTHR32227:SF235SMART:SM00768
EnsemblPlantsGene:SORBI_3002G328200SUPFAM:SSF51445SignalP:SignalP-noTMUniParc:UPI0001A8413DInterPro:X8RefSeq:XP_002462967.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr2:-:69766491..69768834
Molecular Weight (calculated)
53041.3 Da
IEP (calculated)
6.188
GRAVY (calculated)
-0.139
Length
500 amino acids
Sequence
(BLAST)
001: MALSNLVVVL LGTASVLLPF SPADAGVVGV SYGRLGNHLP DTASTVKLLQ KSGITSVRLY DANSKVLKAL ANTGITVMVM LPNDNLAAAA ADPSSARRWV
101: RRNVAAYYPA TRIHGVAVGN EVFEEANKNL TAQLVPAMAN VHDALVKLGL DEAVKVSTPI AFTALQASWP PSAGRFRDDV AASVMKPMLD FLERTGSYLT
201: VNAYPFFAYV EEPDKISLDY ALGNSNAAGV RDPVTGLVYH SLLDAQLDAT YFAMEKLGTS SSSAQEPNFM ARKGPRAYVS ESGWPSAGRP KPGGRPRPRG
301: GGSGRRCLEE EEAGDEAASV ANARAYNNYL INRVLSGDTG TPYRPGADMD VYVFALFNEN QKGDGADDIE QHFGLFYPNQ TKVYEFDFRG GALPSWCVAN
401: ASVGDARLQA ALEYACGHGA DCGAIQPGGA CFEPDTVVAH ASYAFNSYYQ RNGRGSGTCD FAGAASVVHH APKVGHCVLP SNGWVQETTA TAKSEGYTAI
Best Arabidopsis Sequence Match ( AT5G55180.1 )
(BLAST)
001: MAVFVLSLLI LSSFSAIPFT YADSGMIGVN YGRIADNLPA PEKVVELLKT QGINRIKLYD TETTVLTALA NSGIKVVVSL PNENLASAAA DQSYTDTWVQ
101: DNIKKYIPAT DIEAIAVGNE VFVDPRNTTT YLVPAMKNVQ SSLVKFNLDK SIKISSPIAL SALASSYPPS AGSFKPELIE PVIKPMLDLL RKTSSHLMVN
201: AYPFFAYAAN ADKISLDYAL FKENAGNVDS GNGLKYNSLL DAQIDAVFAA MSAVGFNDVK LVVTETGWPS AGDENEIGAG SANAAAYNGG LVKRVLTGNG
301: TPLKPKEPLN VYLFALFNEN QKTGPTSERN YGLFYPNENK VYDVSLNGKS TPVNDNKEKV VPVKPSLVGQ TWCVANGKTT KEKLQEGLDY ACGEGGADCR
401: PIQPGATCYN PESLEAHASY AFNSYYQKNA RGVGTCNFGG AAYVVSQPPK YGKCEFPTGH
Arabidopsis Description
O-Glycosyl hydrolases family 17 protein [Source:UniProtKB/TrEMBL;Acc:F4K3D8]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.