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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 6
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
 extracellular: 24083427
msms PMID: 24083427 doi
T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu
Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os08t0244500-00 Rice extracellular 92.03 94.32
Os07t0539100-01 Rice extracellular 67.94 70.89
Os07t0538000-01 Rice extracellular 64.99 67.2
Os07t0539400-00 Rice extracellular, plastid, vacuole 59.62 66.03
Os07t0539900-01 Rice extracellular 64.3 61.63
TraesCS7B01G285700.2 Wheat extracellular 55.98 57.78
TraesCS2B01G241300.1 Wheat extracellular, vacuole 54.77 57.35
TraesCS2B01G241200.3 Wheat endoplasmic reticulum, extracellular, vacuole 55.63 57.32
TraesCS2A01G216200.1 Wheat extracellular, vacuole 54.59 57.17
TraesCS2D01G221800.1 Wheat extracellular, vacuole 54.42 57.09
HORVU7Hr1G091100.3 Barley vacuole 56.15 57.04
HORVU2Hr1G044450.4 Barley extracellular, vacuole 55.46 57.04
HORVU2Hr1G044460.2 Barley vacuole 54.42 56.68
TraesCS1A01G422900.1 Wheat extracellular, vacuole 52.34 54.12
HORVU1Hr1G092310.2 Barley extracellular 52.34 53.45
TraesCS1B01G454500.1 Wheat vacuole 51.82 53.3
TraesCS1D01G430700.1 Wheat extracellular, vacuole 51.82 53.11
TraesCS1D01G431200.1 Wheat extracellular, vacuole 51.13 52.87
TraesCS1D01G431300.1 Wheat vacuole 51.82 52.09
KXG36404 Sorghum vacuole 51.13 52.03
TraesCS1B01G453900.1 Wheat vacuole 51.47 52.01
TraesCS1A01G422500.1 Wheat vacuole 51.3 51.93
GSMUA_Achr9P16150_001 Banana cytosol, extracellular, plastid, vacuole 36.74 51.83
EER99489 Sorghum extracellular, vacuole 51.3 50.95
HORVU1Hr1G092240.3 Barley extracellular, vacuole 51.65 50.77
Zm00001d021690_P001 Maize extracellular 51.3 50.68
GSMUA_Achr8P22560_001 Banana extracellular, vacuole 36.4 49.88
EER99488 Sorghum extracellular, vacuole 42.98 49.6
Os02t0771700-01 Rice extracellular 41.77 49.39
TraesCS5A01G338400.3 Wheat endoplasmic reticulum, extracellular, vacuole 41.25 48.28
HORVU5Hr1G084900.2 Barley endoplasmic reticulum, extracellular, vacuole 39.69 47.61
TraesCS1B01G454200.1 Wheat extracellular, vacuole 32.93 47.38
CDY20780 Canola extracellular, vacuole 36.22 46.55
CDY17308 Canola extracellular, vacuole 36.05 46.33
CDY36734 Canola extracellular, vacuole 36.92 46.3
EER99491 Sorghum extracellular, vacuole 53.03 46.29
VIT_12s0059g01320.t01 Wine grape extracellular, vacuole 37.78 46.28
AT4G26830.2 Thale cress endoplasmic reticulum, extracellular 36.74 46.19
CDY06601 Canola endoplasmic reticulum, extracellular 35.88 46.1
CDY12009 Canola extracellular, vacuole 36.74 46.09
CDX92794 Canola endoplasmic reticulum, extracellular 35.7 45.68
Bra035561.1-P Field mustard extracellular, vacuole 36.4 45.65
VIT_19s0090g01070.t01 Wine grape extracellular, plasma membrane, vacuole 37.26 45.65
CDY18049 Canola extracellular, vacuole 34.84 45.48
CDY19908 Canola extracellular, vacuole 36.05 45.32
CDY46679 Canola extracellular, vacuole 35.01 45.29
CDY56498 Canola extracellular, vacuole 34.66 45.25
KRH14333 Soybean endoplasmic reticulum, extracellular 35.88 44.9
Solyc07g049370.2.1 Tomato extracellular, vacuole 36.4 44.87
PGSC0003DMT400001833 Potato extracellular, vacuole 36.4 44.87
AT2G05790.1 Thale cress extracellular, vacuole 36.57 44.7
Bra002927.1-P Field mustard extracellular, vacuole 35.7 44.49
PGSC0003DMT400033482 Potato extracellular, vacuole 36.22 44.09
KRH73795 Soybean extracellular, vacuole 36.05 44.07
Solyc12g014420.1.1 Tomato extracellular 36.4 43.75
Zm00001d021695_P001 Maize extracellular 49.05 43.74
AT5G55180.2 Thale cress endoplasmic reticulum, extracellular 35.18 43.66
Bra015166.1-P Field mustard extracellular, vacuole 35.53 43.34
KRH73361 Soybean extracellular, vacuole 35.36 43.22
Zm00001d021697_P001 Maize extracellular 51.99 43.17
Zm00001d006538_P001 Maize vacuole 48.18 42.84
KRH14776 Soybean extracellular, vacuole 35.36 42.77
Bra019084.1-P Field mustard endoplasmic reticulum, extracellular 35.53 41.58
PGSC0003DMT400033484 Potato extracellular, vacuole 27.73 40.1
Bra028988.1-P Field mustard extracellular, vacuole 36.57 36.7
Os02t0532900-01 Rice endoplasmic reticulum, extracellular 24.61 36.32
Os03t0669300-02 Rice endoplasmic reticulum 29.12 36.21
Os01t0860800-01 Rice extracellular 24.78 35.93
Os08t0525800-00 Rice extracellular, mitochondrion, vacuole 28.08 34.76
Os04t0412300-01 Rice plasma membrane, plastid, vacuole 24.44 34.64
Os04t0681950-00 Rice vacuole 26.86 34.37
Os11t0704600-01 Rice extracellular 27.73 33.9
Os01t0739700-01 Rice plasma membrane 28.94 33.87
Os07t0577300-01 Rice extracellular 29.12 33.73
Os03t0246100-01 Rice extracellular, vacuole 25.13 33.72
Os10t0160100-01 Rice extracellular, vacuole 24.44 33.57
Os09t0502200-01 Rice extracellular 27.04 32.5
Os03t0221500-01 Rice extracellular, plasma membrane, vacuole 28.08 32.14
Os03t0227400-01 Rice plasma membrane 20.28 32.05
Os02t0200300-02 Rice golgi, mitochondrion, vacuole 23.4 31.84
Os06t0131500-01 Rice plastid 24.61 31.63
Os03t0845600-01 Rice extracellular, vacuole 25.48 31.01
Os03t0722500-01 Rice extracellular, plasma membrane, vacuole 22.53 29.02
Os07t0510200-01 Rice plasma membrane 27.04 28.89
Os07t0240200-01 Rice endoplasmic reticulum, extracellular, plasma membrane 24.96 28.74
Os06t0531000-00 Rice vacuole 24.61 28.63
Os06t0607000-01 Rice plasma membrane 23.4 28.01
Os04t0682050-01 Rice plasma membrane 4.85 10.61
Os04t0681900-02 Rice endoplasmic reticulum 5.55 9.52
Protein Annotations
KEGG:00500+3.2.1.39Gene3D:3.20.20.80MapMan:50.3.2EntrezGene:9268304EMBL:AK066237ProteinID:BAC84503.1
ProteinID:BAH93966.1ProteinID:BAT01952.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005488
GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0016020GO:GO:0016787GO:GO:0030246GO:GO:0030247GO:GO:0046658InterPro:Glyco_hydro_17
InterPro:Glycoside_hydrolase_SFEnsemblPlantsGene:Os07g0539300EnsemblPlants:Os07t0539300-01PFAM:PF00332PFAM:PF07983PANTHER:PTHR32227
PANTHER:PTHR32227:SF235UniProt:Q6YVU4SMART:SM00768SUPFAM:SSF51445SignalP:SignalP-noTMUniParc:UPI00001BF6F2
InterPro:X8RefSeq:XP_015647405.1RefSeq:XP_015647406.1SEG:seg::
Description
beta-1, 3-glucanase 13Glycoside hydrolase, family 17 protein. (Os07t0539300-01);Glycoside hydrolase, family 17 protein. (Os07t0539300-02)
Coordinates
chr7:-:21238284..21241263
Molecular Weight (calculated)
60900.8 Da
IEP (calculated)
4.932
GRAVY (calculated)
-0.005
Length
577 amino acids
Sequence
(BLAST)
001: MAFSHLLHAL LVAAALPLLL LPRAADAGEI GVCYGRDANN LIDPPAAVSL LKANGISAVR IFDADQTVLD AMANTGIKVM VAIPNADLAA AGQDLRSATD
101: WVTNNVVPYR SRGTLINGVA VGNEVFRQRP ELTGMLVSAM RNLHKALENL NLANDVKVST PIAFDALKQS SPPSAGEFKD EIAQSVMKPM IDFLKQTGSY
201: FMVNLYPYFA YVAQPDKISL EFATFRPNAG VLDGNTGIRY FSLFDAQLDA VYAAINRVSG GSLTVSMARR DGILSVQASE SGHPSGGTFP LFSMLAAADT
301: DSIATIADAQ AYNNGLIRRV VSGASGMRDV SAYIFSLFNE NEKPGPAIER NFGLFYPNGQ KVYEVDFRGG GGGGACPTKT SWCVARTDVG SAALQSALDF
401: ACGNGADCSA IRQGSVCFEP NTLVAHASYA FNDYYQRKGQ ASGTCNFSGA ASIVFKPSPS ICDPNPSWCV AKSEVGDAQL QNALDYACGS CADCSAIQPG
501: ARCFDPDTKV AHATYAFNDF YQTTGRASGS CDFAGAASIV NQQPKIGNCV LPPNNAGTEQ TAIEDQSTAN LPATAWQ
Best Arabidopsis Sequence Match ( AT4G26830.2 )
(BLAST)
001: MSVSVFAVST TLFLFCVFFV FVSTDSGMVG VNYGRIANNL PSPEKVVNLL KSQGINRIKI FDTDKNVLTA LANSKIKVIV ALPNELLSSA ASHQSFADNW
101: IKTHIMPYFP ATEIEAIAVG NEVFVDPTIT PYLVNAMKNI HTSLVKYKLD KAIKISSPIA LSALANSYPP SSGSFKPELI EPVVKPMLAL LQQTSSYLMV
201: NAYPFFAYAA NADKISLDYA LFKENAGNID SGTGLKYNSL FDAQIDAVYA ALSAVGFKGV KVMVTETGWP SVGDENEIGA SESNAAAYNA GLVKRVLTGK
301: GTPLRPTEPL NVYLFALFNE NQKPGPTSER NYGLFYPNEG KVYNVPFTKK STTPVNGNRG KVPVTHEGHT WCVSNGEVAK EKLQEALDYA CGEGGADCRP
401: IQPGATCYHP ESLEAHASYA FNSYYQKNSR RVGTCFFGGA AHVVTQPPRY GKCEFPTGH
Arabidopsis Description
O-Glycosyl hydrolases family 17 protein [Source:TAIR;Acc:AT4G26830]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.