Factsheet for Os01t0739700-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 7
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

plasma membrane: 18260611
extracellular: 19038476
plasma membrane: 19502382

msms PMID: 19502382 doi

M Fujiwara, S Hamada, M Hiratsuka, Y Fukao, T Kawasaki, K Shimamoto

Laboratory of Plant Protein Analysis, Plant Education Unit, Nara Institute of Science and Technology, Takayama, Ikoma, Japan.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

msms PMID: 19038476 doi

XY Chen, ST Kim, WK Cho, Y Rim, S Kim, SW Kim, KY Kang, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01451	Sorghum	extracellular, plasma membrane, vacuole	89.45	88.73
Zm00001d043524_P001	Maize	plasma membrane	89.05	88.51
HORVU3Hr1G070400.1	Barley	extracellular, vacuole	81.14	87.34
TraesCS3A01G277100.2	Wheat	vacuole	86.61	86.44
TraesCS3D01G277300.4	Wheat	vacuole	87.02	80.94
TraesCS3B01G311300.2	Wheat	vacuole	86.41	80.23
HORVU3Hr1G070440.12	Barley	plastid	82.96	78.65
GSMUA_Achr4P02650_001	Banana	extracellular, vacuole	66.53	76.1
KRH41480	Soybean	extracellular, plasma membrane, vacuole	70.99	70.28
VIT_11s0016g02960.t01	Wine grape	extracellular, vacuole	69.37	69.23
KRH60198	Soybean	extracellular, plasma membrane, vacuole	69.98	69.14
Solyc12g008580.1.1	Tomato	extracellular	69.17	68.75
PGSC0003DMT400000943	Potato	extracellular, vacuole	69.17	68.75
Bra002805.1-P	Field mustard	nucleus, plastid, vacuole	63.69	63.82
CDY32869	Canola	endoplasmic reticulum, extracellular, plasma membrane	64.91	63.62
CDY64970	Canola	extracellular, plasma membrane, vacuole	64.91	63.62
AT5G56590.1	Thale cress	extracellular, plasma membrane, vacuole	64.1	62.45
Os02t0771700-01	Rice	extracellular	40.77	41.19
Os03t0221500-01	Rice	extracellular, plasma membrane, vacuole	39.15	38.29
Os01t0860800-01	Rice	extracellular	29.82	36.93
Os03t0669300-02	Rice	endoplasmic reticulum	34.69	36.85
Os02t0532900-01	Rice	endoplasmic reticulum, extracellular	29.21	36.83
Os08t0525800-00	Rice	extracellular, mitochondrion, vacuole	34.48	36.48
Os04t0681950-00	Rice	vacuole	33.27	36.36
Os07t0577300-01	Rice	extracellular	36.71	36.35
Os03t0227400-01	Rice	plasma membrane	26.57	35.89
Os11t0704600-01	Rice	extracellular	34.28	35.81
Os04t0412300-01	Rice	plasma membrane, plastid, vacuole	29.21	35.38
Os10t0160100-01	Rice	extracellular, vacuole	29.01	34.05
Os02t0200300-02	Rice	golgi, mitochondrion, vacuole	29.21	33.96
Os03t0246100-01	Rice	extracellular, vacuole	29.61	33.95
Os09t0502200-01	Rice	extracellular	32.66	33.54
Os06t0131500-01	Rice	plastid	30.02	32.96
Os07t0510200-01	Rice	plasma membrane	35.9	32.78
Os03t0845600-01	Rice	extracellular, vacuole	30.43	31.65
Os07t0538000-01	Rice	extracellular	34.89	30.82
Os07t0539100-01	Rice	extracellular	34.08	30.38
Os03t0722500-01	Rice	extracellular, plasma membrane, vacuole	27.38	30.13
Os06t0607000-01	Rice	plasma membrane	29.41	30.08
Os06t0531000-00	Rice	vacuole	30.02	29.84
Os08t0244500-00	Rice	extracellular	33.67	29.48
Os07t0539400-00	Rice	extracellular, plastid, vacuole	30.83	29.17
Os07t0539300-01	Rice	extracellular	33.87	28.94
Os07t0240200-01	Rice	endoplasmic reticulum, extracellular, plasma membrane	28.6	28.14
Os07t0539900-01	Rice	extracellular	33.47	27.41
Os04t0682050-01	Rice	plasma membrane	6.29	11.74
Os04t0681900-02	Rice	endoplasmic reticulum	5.07	7.44

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:3.20.20.80	EntrezGene:4327203	MapMan:50.3.2	EMBL:AK063960	ProteinID:BAD86947.1
ProteinID:BAF06112.1	ProteinID:BAS74263.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488
GO:GO:0005575	GO:GO:0005618	GO:GO:0005623	GO:GO:0005886	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009505	GO:GO:0016020	GO:GO:0016787	GO:GO:0016798	GO:GO:0030246
GO:GO:0030247	GO:GO:0030312	GO:GO:0046658	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	EnsemblPlantsGene:Os01g0739700
EnsemblPlants:Os01t0739700-01	PFAM:PF00332	PFAM:PF07983	ScanProsite:PS00587	PANTHER:PTHR32227	PANTHER:PTHR32227:SF88
UniProt:Q5JNL0	SMART:SM00768	SUPFAM:SSF51445	SignalP:SignalP-noTM	UniParc:UPI00004C2814	InterPro:X8
RefSeq:XP_015628437.1	SEG:seg	:	:	:	:

Description

Glycoside hydrolase, family 17 protein. (Os01t0739700-01)

Coordinates

chr1:+:30897747..30901040

Molecular Weight (calculated)

53823.8 Da

IEP (calculated)

5.025

GRAVY (calculated)

-0.045

Length

493 amino acids

Sequence
(BLAST)

001: MAHVAFVALL FLLLVGHCLG GKVGICYGRN ADDLPAPDKV VQLIQQQSLK YVRIYDTNID VIKAFANTGV ELMVGVPNSD LLPFAQYQSN VDTWLKNSIL
101: PYYPATMITY ITVGAEVTES PVNVSALVVP AMRNVHTALK KAGLHKKITI SSTHSLGILS RSFPPSAGAF NSSYAYFLKP MLEFLVENQA PFMVDLYPYY
201: AYQNSPSNVS LNYALFSPQS QDVIDPNTGL VYTNMFDAQI DSIFFALMAL NFKTLKIMVT ETGWPNKGAA KETGATPDNA QTYNTNLIRH VVNDSGTPAK
301: PGEEIDVYIF SLFNENRKPG IESERNWGLF FPDQSSIYSL DWTGRGNVDI MTGGNITNAN GTWCVASANA SETDLQNGLN WACGPGNVDC SAIQPSQPCY
401: QPDTLASHAS YAFNSYYQQN GANDVACDFG GTGVRTTKDP SYDTCVYMAA GSKMSTTNSS NLPVQSGFSP SRFDKNFYLL FSMLPIMIAA CIV

Best Arabidopsis Sequence Match ( AT5G56590.1 )
(BLAST)

001: MARDFKLIFS ISILLLLLDC CYGGKVGVCY GRSADDLPTP SKVVQLIQQH NIKYVRIYDY NSQVLKAFGN TSIELMIGVP NSDLNAFSQS QSNVDTWLKN
101: SVLPYYPTTK ITYITVGAES TDDPHINASS FVVPAMQNVL TALRKVGLSR RIKVSTTLSL GILSRSFPPS AGAFNSSYAY FLRPMLEFLA ENKSPFMIDL
201: YPYYAYRDSP NNVSLDYVLF ESSSEVIDPN TGLLYKNMFD AQVDALYYAL TALNFRTIKI MVTETGWPTK GSPKEKAAAS SDNAETYNSN IIRHVVTNQG
301: TPAKPGEAMN VYIFSLFNEN RKAGLDSERN WGLFYPDQTS VYQLDFTGKS NGFHSNSSGT NSSGSSNSWC IASSKASERD LKGALDWACG PGNVDCTAIQ
401: PSQPCFQPDT LVSHASFVFN SYFQQNRATD VACSFGGAGV KVNKDPSYDK CIYITAGGNK TKATNATALT SSASTPRGNE LLQWILKLCL MISLFFSLQT
501: MNSQAL

Arabidopsis Description

Glucan endo-1,3-beta-glucosidase 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJU9]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.