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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 2
  • vacuole 2
  • extracellular 3
  • endoplasmic reticulum 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:vacuole
Plant-mPloc:extracellular
PProwler:secretory
TargetP:plastid
YLoc:extracellular
 plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER95211 Sorghum extracellular, vacuole 85.48 72.22
TraesCS4A01G077800.1 Wheat vacuole 80.82 67.82
TraesCS4D01G235000.1 Wheat plasma membrane, vacuole 81.37 67.81
HORVU4Hr1G065340.1 Barley extracellular, vacuole 79.45 67.29
TraesCS4B01G233900.2 Wheat plasma membrane, plastid, vacuole 80.82 63.99
Zm00001d028331_P001 Maize plastid 84.38 59.23
Os03t0722500-01 Rice extracellular, plasma membrane, vacuole 60.55 49.33
GSMUA_Achr6P31650_001 Banana extracellular, vacuole 59.45 47.28
Solyc04g080260.2.1 Tomato extracellular 56.44 46.71
PGSC0003DMT400013154 Potato extracellular, vacuole 56.16 46.49
Os03t0669300-02 Rice endoplasmic reticulum 58.9 46.34
Bra033641.1-P Field mustard extracellular, vacuole 53.15 44.91
CDY22386 Canola extracellular, vacuole 52.88 44.68
KRH51533 Soybean endoplasmic reticulum, extracellular, vacuole 55.62 44.23
CDX71547 Canola extracellular, vacuole 52.33 43.81
KRH60849 Soybean endoplasmic reticulum, extracellular, vacuole 55.07 43.79
VIT_18s0001g12390.t01 Wine grape extracellular, vacuole 55.62 43.66
AT5G42720.1 Thale cress extracellular, plasma membrane, vacuole 51.51 42.92
KRH24481 Soybean cytosol 42.19 42.78
PGSC0003DMT400001908 Potato extracellular 54.79 42.55
Solyc01g109570.2.1 Tomato extracellular 55.07 42.49
VIT_03s0063g02490.t01 Wine grape endoplasmic reticulum, extracellular 54.25 40.41
KRH15221 Soybean extracellular 53.15 40.08
CDX69064 Canola extracellular, plasma membrane, vacuole 54.52 39.41
AT4G34480.1 Thale cress extracellular, plasma membrane, vacuole 54.25 39.29
Bra039852.1-P Field mustard vacuole 50.14 39.27
Bra011537.1-P Field mustard extracellular, plasma membrane, vacuole 54.25 39.13
CDX75437 Canola extracellular, plasma membrane, vacuole 54.25 39.13
AT2G16230.1 Thale cress vacuole 50.96 36.98
CDY37244 Canola vacuole 50.41 35.94
Os02t0532900-01 Rice endoplasmic reticulum, extracellular 38.08 35.55
CDY26761 Canola vacuole 49.86 35.55
Bra017659.1-P Field mustard vacuole 53.15 35.02
Os01t0860800-01 Rice extracellular 37.53 34.42
Os06t0131500-01 Rice plastid 42.19 34.3
Os04t0412300-01 Rice plasma membrane, plastid, vacuole 38.08 34.15
Os02t0200300-02 Rice golgi, mitochondrion, vacuole 37.81 32.55
Os08t0525800-00 Rice extracellular, mitochondrion, vacuole 40.27 31.55
Os10t0160100-01 Rice extracellular, vacuole 35.07 30.48
Os09t0502200-01 Rice extracellular 39.45 30.0
Os07t0240200-01 Rice endoplasmic reticulum, extracellular, plasma membrane 40.55 29.54
Os04t0681950-00 Rice vacuole 36.16 29.27
Os11t0704600-01 Rice extracellular 37.81 29.24
Os06t0531000-00 Rice vacuole 39.73 29.23
Os02t0771700-01 Rice extracellular 38.9 29.1
Os03t0246100-01 Rice extracellular, vacuole 34.25 29.07
Os03t0845600-01 Rice extracellular, vacuole 36.16 27.85
Os06t0607000-01 Rice plasma membrane 35.89 27.18
Os01t0739700-01 Rice plasma membrane 35.89 26.57
Os03t0221500-01 Rice extracellular, plasma membrane, vacuole 35.07 25.4
Os07t0510200-01 Rice plasma membrane 36.16 24.44
Os07t0577300-01 Rice extracellular 32.88 24.1
Os07t0538000-01 Rice extracellular 33.7 22.04
Os08t0244500-00 Rice extracellular 32.6 21.14
Os07t0539300-01 Rice extracellular 32.05 20.28
Os07t0539400-00 Rice extracellular, plastid, vacuole 28.77 20.15
Os07t0539100-01 Rice extracellular 29.59 19.53
Os07t0539900-01 Rice extracellular 31.51 19.1
Os04t0682050-01 Rice plasma membrane 7.67 10.61
Os04t0681900-02 Rice endoplasmic reticulum 2.19 2.38
Protein Annotations
KEGG:00500+3.2.1.39Gene3D:3.20.20.80MapMan:50.3.2UniProt:A0A0P0VUY0ProteinID:BAS83071.1GO:GO:0003674
GO:GO:0003824GO:GO:0004553GO:GO:0005488GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016020GO:GO:0016787GO:GO:0030246
GO:GO:0030247GO:GO:0046658InterPro:Glyco_hydro_17InterPro:Glycoside_hydrolase_SFEnsemblPlantsGene:Os03g0227400EnsemblPlants:Os03t0227400-01
PFAM:PF00332PANTHER:PTHR32227PANTHER:PTHR32227:SF109SUPFAM:SSF51445UniParc:UPI00039389E6SEG:seg
Description
Similar to glucan endo-1,3-beta-glucosidase 7. (Os03t0227400-01)
Coordinates
chr3:-:6706278..6708143
Molecular Weight (calculated)
37991.8 Da
IEP (calculated)
4.311
GRAVY (calculated)
0.093
Length
365 amino acids
Sequence
(BLAST)
001: LIFAASQSFI GVNYGTIADN LPPPASTANL LKSTSIGKVR LYEPQPDLVA ALAGSNISIL LGVPNGDVPN LASSPAAASA WAAANIPTTV PVSAISVGNE
101: LLNSGDPTLA PQLLPAMQNL LAALPAGSTT KISTVHSMAV LSSSDPPSSG AFHADLAGSL DPVLDFLKQN GAPFMINPYP YFAYASDTRP ETLAFCLFQP
201: NPGRVDAGSG LTYTNMFDAQ LDAIRAALDA KGYSGVDIVI AETGWPYKGD ADEGGATVDN ARAYNGNLVA HLKSQVGTPR TPGKSVDTYL FALYDEDLKG
301: GPESERSFGL YRTDLTANYD IGLAAAPGTA APATVTPVTV QVSSMLVAYR FCLQSLDRME WTSLI
Best Arabidopsis Sequence Match ( AT4G34480.2 )
(BLAST)
001: MALSISIYFL LIFLSHFPSS HAEPFIGVNY GQVADNLPPP SETVKLLQST SIQKVRLYGA DPAIIKALAG TGVGIVIGAA NGDVPSLASD PNAATQWINS
101: NVLPFYPASK IMLITVGNEI LMSNDPNLVN QLLPAMQNVQ KALEAVSLGG KIKVSTVNSM TVLGSSDPPS SGSFAAGYQT GLKGILQFLS DTGSPFAINP
201: YPFFAYQSDP RPETLAFCLF EPNAGRVDSK TGIKYTNMFD AQVDAVHSAL KSMGFEKVEI VVAETGWASR GDANEVGASV DNAKAYNGNL IAHLRSMVGT
301: PLMPGKPVDT YIFALYDENL KPGPSSERAF GLFKTDLSMV YDVGLAKSSS SSQVRY
Arabidopsis Description
Glucan endo-1,3-beta-glucosidase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M069]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.