CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 7
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

extracellular: 25724908

msms PMID: 25724908 doi

VC Clarke, PC Loughlin, A Gavrin, C Chen, EM Brear, DA Day, PM Smith

From the ‡University of Sydney, School of Biological Sciences, Sydney Australia;, From the ‡University of Sydney, School of Biological Sciences, Sydney Australia; penny.smith@sydney.edu.au., From the ‡University of Sydney, School of Biological Sciences, Sydney Australia; §Flinders University, School of Biological Sciences, Adelaide Australia.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0001g12390.t01	Wine grape	extracellular, vacuole	69.01	71.83
KRH51533	Soybean	endoplasmic reticulum, extracellular, vacuole	64.46	67.97
KRH60849	Soybean	endoplasmic reticulum, extracellular, vacuole	63.84	67.32
KRH24481	Soybean	cytosol	47.52	63.89
PGSC0003DMT400013154	Potato	extracellular, vacuole	57.02	62.59
Solyc04g080260.2.1	Tomato	extracellular	56.61	62.13
Bra033641.1-P	Field mustard	extracellular, vacuole	53.51	59.95
GSMUA_Achr7P08120_001	Banana	plastid	39.88	59.94
CDY22386	Canola	extracellular, vacuole	53.31	59.72
AT5G42720.1	Thale cress	extracellular, plasma membrane, vacuole	53.72	59.36
GSMUA_Achr6P31650_001	Banana	extracellular, vacuole	56.2	59.26
CDX71547	Canola	extracellular, vacuole	53.31	59.17
Os03t0669300-02	Rice	endoplasmic reticulum	54.96	57.33
TraesCS4B01G020100.1	Wheat	extracellular	54.13	56.59
TraesCS4D01G018300.1	Wheat	plasma membrane, vacuole	54.55	56.05
TraesCS4A01G293500.1	Wheat	plasma membrane	53.93	55.77
GSMUA_Achr7P26810_001	Banana	plastid	33.68	55.07
KXG37872	Sorghum	endoplasmic reticulum, extracellular, vacuole	53.72	54.74
Zm00001d013573_P001	Maize	extracellular, plasma membrane, vacuole	52.27	54.64
Os03t0227400-01	Rice	plasma membrane	40.08	53.15
HORVU4Hr1G008950.1	Barley	vacuole	44.21	51.32
TraesCS4D01G053700.1	Wheat	vacuole	44.01	50.35
TraesCS4B01G053700.2	Wheat	vacuole	43.39	50.24
TraesCS4A01G260900.2	Wheat	extracellular, plasma membrane, vacuole	43.39	50.24
EER93548	Sorghum	vacuole	45.25	49.21
HORVU4Hr1G003090.3	Barley	extracellular, vacuole	54.34	49.07
HORVU4Hr1G065340.1	Barley	extracellular, vacuole	43.59	48.96
Zm00001d013390_P001	Maize	extracellular	44.21	48.42
EER95211	Sorghum	extracellular, vacuole	43.18	48.38
TraesCS4A01G077800.1	Wheat	vacuole	43.39	48.28
TraesCS4D01G235000.1	Wheat	plasma membrane, vacuole	43.39	47.95
GSMUA_Achr3P30520_001	Banana	cytosol, plastid, vacuole	44.63	47.26
Os03t0722500-01	Rice	extracellular, plasma membrane, vacuole	43.59	47.1
TraesCS4B01G233900.2	Wheat	plasma membrane, plastid, vacuole	42.56	44.69
KRH52523	Soybean	extracellular, plasma membrane, vacuole	29.96	41.91
KRH11184	Soybean	endoplasmic reticulum, extracellular, vacuole	33.68	40.95
KRH21069	Soybean	vacuole	33.68	40.85
KRH01668	Soybean	extracellular	38.43	40.79
KRH14333	Soybean	endoplasmic reticulum, extracellular	38.84	40.78
KRH34248	Soybean	extracellular, plasma membrane, vacuole	34.5	40.34
KRH73361	Soybean	extracellular, vacuole	39.05	40.04
KRG89415	Soybean	extracellular, vacuole	29.55	39.83
KRH14776	Soybean	extracellular, vacuole	39.26	39.83
Zm00001d028331_P001	Maize	plastid	42.36	39.42
KRH73795	Soybean	extracellular, vacuole	38.43	39.41
KRH22675	Soybean	vacuole	30.99	38.27
KRG89350	Soybean	extracellular, vacuole	30.79	37.25
KRH47445	Soybean	extracellular, vacuole	29.96	37.18
KRH30421	Soybean	extracellular, plasma membrane, vacuole	30.17	37.15
KRH60198	Soybean	extracellular, plasma membrane, vacuole	38.22	37.07
KRH25239	Soybean	extracellular, plasma membrane, vacuole	29.96	36.99
KRH41480	Soybean	extracellular, plasma membrane, vacuole	38.02	36.95
KRH44462	Soybean	extracellular, vacuole	29.55	36.76
KRH08471	Soybean	extracellular	37.4	36.49
KRH70129	Soybean	cytosol	36.78	36.33
KRH09724	Soybean	extracellular, plasma membrane, vacuole	28.72	36.01
KRH46623	Soybean	nucleus	34.5	35.76
KRH50394	Soybean	extracellular, vacuole	32.02	35.63
KRG99621	Soybean	nucleus	34.3	35.55
KRH17336	Soybean	plasma membrane	35.74	34.74
KRH26646	Soybean	extracellular, plasma membrane, vacuole	30.58	34.66
KRG97940	Soybean	extracellular, plasma membrane, vacuole	35.33	34.34
KRH20124	Soybean	golgi, vacuole	27.48	34.28
KRH41666	Soybean	plasma membrane	35.33	34.27
KRH23581	Soybean	extracellular, vacuole	25.41	34.26
KRH30935	Soybean	extracellular, plasma membrane, vacuole	34.92	33.94
KRH72984	Soybean	vacuole	35.33	33.86
KRH20365	Soybean	extracellular, vacuole	27.27	33.76
KRH05027	Soybean	extracellular, plasma membrane, vacuole	33.47	32.53
KRH16072	Soybean	extracellular, plasma membrane, vacuole	33.26	32.14
KRH51109	Soybean	vacuole	34.71	32.12
KRH42823	Soybean	extracellular, plasma membrane, vacuole	32.44	31.65
KRH03678	Soybean	golgi, mitochondrion, plasma membrane, plastid, vacuole	27.07	31.34
KRH58918	Soybean	endoplasmic reticulum	32.02	31.25
KRH02051	Soybean	mitochondrion, vacuole	35.12	31.14
KRH11452	Soybean	extracellular, vacuole	21.28	30.65
KRH60366	Soybean	extracellular	35.33	29.64

Protein Annotations

KEGG:00500+3.2.1.39	EntrezGene:100802287	Gene3D:3.20.20.80	MapMan:50.3.2	EMBL:ACUP02008569	EnsemblPlantsGene:GLYMA_14G075500
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016787
GO:GO:0030246	GO:GO:0030247	GO:GO:0046658	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	UniProt:I1M8D6
EnsemblPlants:KRH15221	ProteinID:KRH15221	ProteinID:KRH15221.1	PFAM:PF00332	PFAM:PF07983	PANTHER:PTHR32227
PANTHER:PTHR32227:SF228	SMART:SM00768	SUPFAM:SSF51445	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000233B3F3
InterPro:X8	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr14:+:6324233..6328663

Molecular Weight (calculated)

51190.5 Da

IEP (calculated)

4.777

GRAVY (calculated)

-0.071

Length

484 amino acids

Sequence
(BLAST)

001: MAIIFLSSSA ILLPSLAFFL TLFNLASSES FIGVNYGQVA DNLPPPSATA KLLQSTAIGK VRLYGTDPAI IKALANTGIG IVIGAANGDI PGLASDPNFA
101: KTWVNTNVVP YYPASNIILI TVGNEVITSN DQNLVNQMLP AIQNVQGALD AASLGGGKIK VSTVHAMSVL RDSEPPSAGR FHPEYDTVLQ GLLSFNNATG
201: SPFTINPYPY FAYRSDPGRA DNLAFCLFQP NAGRVDSNTN LKYMNMFDAQ VDAVRSALDA MGFKNVEIVV AETGWPYKGD SNEAGPSLEN AKAYNGNLIA
301: HLRSMVGTPL MPGKSVDTYL FALYDEDLKP GPASERAFGL YNPDQSMIYD AGLSKQQETS SPVPTVAPTT PDVSKSPSTP KPTVSSPTKT NNSATWCVPK
401: GGVADAQLQA NLDYACGQGI DCTAIQQGGA CFEPNTLVNH AAYAMNLLYQ TAGRNPLTCD FSQTAMLSTN NPSYKSCLYA GGNA

Best Arabidopsis Sequence Match ( AT4G34480.1 )
(BLAST)

001: MALSISIYFL LIFLSHFPSS HAEPFIGVNY GQVADNLPPP SETVKLLQST SIQKVRLYGA DPAIIKALAG TGVGIVIGAA NGDVPSLASD PNAATQWINS
101: NVLPFYPASK IMLITVGNEI LMSNDPNLVN QLLPAMQNVQ KALEAVSLGG KIKVSTVNSM TVLGSSDPPS SGSFAAGYQT GLKGILQFLS DTGSPFAINP
201: YPFFAYQSDP RPETLAFCLF EPNAGRVDSK TGIKYTNMFD AQVDAVHSAL KSMGFEKVEI VVAETGWASR GDANEVGASV DNAKAYNGNL IAHLRSMVGT
301: PLMPGKPVDT YIFALYDENL KPGPSSERAF GLFKTDLSMV YDVGLAKSSS SSQTPSGKVT SSGWCVPKKG ATNEELQASL DWACGHGIDC GAIQPGGACF
401: EPNNVVSHAA YAMNMYFQKS PKQPTDCDFS KTATVTSQNP SYNNCVYPGG GGGGGGGGGG SKAVMNKYVS SDKVEKKNGA TEPKVSSSLS FLLIFLSLIF
501: HVYM

Arabidopsis Description

Glucan endo-1,3-beta-glucosidase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M069]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.