Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G053700.2 | Wheat | vacuole | 98.56 | 98.56 |
| TraesCS4D01G053700.1 | Wheat | vacuole | 96.41 | 95.27 |
| HORVU4Hr1G008950.1 | Barley | vacuole | 93.06 | 93.29 |
| Os03t0722500-01 | Rice | extracellular, plasma membrane, vacuole | 78.71 | 73.44 |
| EER93548 | Sorghum | vacuole | 73.21 | 68.76 |
| Zm00001d013390_P001 | Maize | extracellular | 72.25 | 68.33 |
| TraesCS4A01G077800.1 | Wheat | vacuole | 54.07 | 51.95 |
| GSMUA_Achr6P31650_001 | Banana | extracellular, vacuole | 53.11 | 48.37 |
| Solyc04g080260.2.1 | Tomato | extracellular | 50.96 | 48.3 |
| PGSC0003DMT400013154 | Potato | extracellular, vacuole | 50.72 | 48.07 |
| TraesCS4A01G293500.1 | Wheat | plasma membrane | 53.59 | 47.86 |
| AT5G42720.1 | Thale cress | extracellular, plasma membrane, vacuole | 48.56 | 46.35 |
| KRH51533 | Soybean | endoplasmic reticulum, extracellular, vacuole | 50.72 | 46.19 |
| KRH60849 | Soybean | endoplasmic reticulum, extracellular, vacuole | 50.48 | 45.97 |
| Bra033641.1-P | Field mustard | extracellular, vacuole | 47.13 | 45.6 |
| CDY22386 | Canola | extracellular, vacuole | 46.89 | 45.37 |
| VIT_18s0001g12390.t01 | Wine grape | extracellular, vacuole | 50.0 | 44.95 |
| CDX71547 | Canola | extracellular, vacuole | 46.65 | 44.72 |
| KRH24481 | Soybean | cytosol | 38.52 | 44.72 |
| PGSC0003DMT400001908 | Potato | extracellular | 48.8 | 43.4 |
| KRH15221 | Soybean | extracellular | 50.24 | 43.39 |
| VIT_03s0063g02490.t01 | Wine grape | endoplasmic reticulum, extracellular | 50.72 | 43.27 |
| Solyc01g109570.2.1 | Tomato | extracellular | 48.8 | 43.13 |
| TraesCS1A01G055900.1 | Wheat | extracellular | 27.75 | 40.14 |
| Bra039852.1-P | Field mustard | vacuole | 44.5 | 39.91 |
| AT4G34480.1 | Thale cress | extracellular, plasma membrane, vacuole | 47.85 | 39.68 |
| CDX69064 | Canola | extracellular, plasma membrane, vacuole | 47.85 | 39.6 |
| CDX75437 | Canola | extracellular, plasma membrane, vacuole | 47.61 | 39.33 |
| Bra011537.1-P | Field mustard | extracellular, plasma membrane, vacuole | 47.13 | 38.93 |
| TraesCS2A01G294700.1 | Wheat | plasma membrane | 36.12 | 38.72 |
| AT2G16230.1 | Thale cress | vacuole | 46.17 | 38.37 |
| TraesCS3A01G374000.2 | Wheat | endoplasmic reticulum, extracellular | 37.32 | 38.24 |
| TraesCS3A01G249500.1 | Wheat | vacuole | 35.89 | 38.07 |
| TraesCS7A01G349200.1 | Wheat | endoplasmic reticulum, extracellular | 36.84 | 38.02 |
| TraesCS1A01G276200.1 | Wheat | vacuole | 37.08 | 37.8 |
| TraesCS5A01G329700.1 | Wheat | vacuole | 34.21 | 36.39 |
| CDY37244 | Canola | vacuole | 44.5 | 36.33 |
| TraesCS7A01G069700.1 | Wheat | extracellular, vacuole | 37.08 | 36.13 |
| Bra017659.1-P | Field mustard | vacuole | 47.85 | 36.1 |
| TraesCS7A01G378100.1 | Wheat | golgi, vacuole | 34.45 | 36.09 |
| CDY26761 | Canola | vacuole | 44.02 | 35.94 |
| TraesCS1A01G049800.1 | Wheat | extracellular, vacuole | 33.73 | 34.73 |
| TraesCS4A01G067900.1 | Wheat | vacuole | 33.49 | 33.49 |
| TraesCS6A01G325300.1 | Wheat | cytosol, extracellular, vacuole | 36.84 | 33.12 |
| TraesCS6A01G164100.1 | Wheat | plastid | 34.45 | 32.88 |
| TraesCS4A01G175900.1 | Wheat | extracellular | 35.89 | 32.54 |
| TraesCS1A01G046000.1 | Wheat | extracellular, vacuole | 27.99 | 32.23 |
| TraesCS2A01G439500.1 | Wheat | extracellular | 34.93 | 31.74 |
| TraesCS5A01G329600.1 | Wheat | extracellular, plasma membrane, vacuole | 35.41 | 30.71 |
| TraesCS7A01G256800.1 | Wheat | vacuole | 32.54 | 27.53 |
| TraesCS5A01G338400.3 | Wheat | endoplasmic reticulum, extracellular, vacuole | 32.06 | 27.18 |
| TraesCS5A01G390600.1 | Wheat | extracellular | 31.58 | 26.72 |
| TraesCS3A01G277100.2 | Wheat | vacuole | 31.34 | 26.52 |
| TraesCS2A01G186900.1 | Wheat | extracellular, plasma membrane, vacuole | 29.19 | 24.75 |
| TraesCS4A01G064900.2 | Wheat | extracellular, plasma membrane, vacuole | 31.1 | 24.62 |
| TraesCS5A01G155600.1 | Wheat | plasma membrane | 28.95 | 24.35 |
| TraesCS1A01G422900.1 | Wheat | extracellular, vacuole | 31.58 | 23.66 |
| TraesCS1A01G422500.1 | Wheat | vacuole | 32.06 | 23.51 |
| TraesCS2A01G224900.1 | Wheat | plasma membrane, vacuole | 29.43 | 23.12 |
| TraesCS2A01G216200.1 | Wheat | extracellular, vacuole | 29.43 | 22.32 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G260900.2 | EnsemblPlantsGene:TraesCS4A01G260900 | Gene3D:3.20.20.80 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | InterPro:Glyco_hydro_17 | InterPro:Glycoside_hydrolase_SF |
| KEGG:00500+3.2.1.39 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF107 | PFAM:PF00332 | SEG:seg | SignalP:SignalP-noTM |
| SUPFAM:SSF51445 | TMHMM:TMhelix | MapMan:50.3.2 | : | : | : |
Description
No Description!
Coordinates
chr4A:-:573326180..573328349
Molecular Weight (calculated)
43299.6 Da
IEP (calculated)
5.950
GRAVY (calculated)
0.165
Length
418 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRPLLVALL LLGLLLLVHV PYAAPQSFIG INYGDIADNL PPPASTARLL KSTTIGKVRL YRTDPAVVAA FAGTSISLLL GAANADIPSF ASSPSAAAAW
101: VAAHLPSSSS PAVNGISVGN EVLYSGDAAL ISQLVPALQN IYDALPASSG IKVSTVNAMD VLASSDPPSS GAFKPELSAA LDPLLAFLSK TGSPFLVNPY
201: PYFAYQDDPR PDTLAFCLFQ PNAGRPDAGS GLTYTSMFDA QVDAVRAALD AKGYKDVEVV VAETGWPHSG GADEAGASVE NARAFVSNLV SHLRSMVGTP
301: RMPGKSVDTY LFAVYDEDLK PGKASEKSFG LFQTTLTETY PTGLMRNGTA GLAPAPAPTL RPASPPPATP QVTPVQPQPS ASAAATSPPR HARSAAESPR
401: TVPALHVFAC FLFMSLLA
101: VAAHLPSSSS PAVNGISVGN EVLYSGDAAL ISQLVPALQN IYDALPASSG IKVSTVNAMD VLASSDPPSS GAFKPELSAA LDPLLAFLSK TGSPFLVNPY
201: PYFAYQDDPR PDTLAFCLFQ PNAGRPDAGS GLTYTSMFDA QVDAVRAALD AKGYKDVEVV VAETGWPHSG GADEAGASVE NARAFVSNLV SHLRSMVGTP
301: RMPGKSVDTY LFAVYDEDLK PGKASEKSFG LFQTTLTETY PTGLMRNGTA GLAPAPAPTL RPASPPPATP QVTPVQPQPS ASAAATSPPR HARSAAESPR
401: TVPALHVFAC FLFMSLLA
001: MALSISIYFL LIFLSHFPSS HAEPFIGVNY GQVADNLPPP SETVKLLQST SIQKVRLYGA DPAIIKALAG TGVGIVIGAA NGDVPSLASD PNAATQWINS
101: NVLPFYPASK IMLITVGNEI LMSNDPNLVN QLLPAMQNVQ KALEAVSLGG KIKVSTVNSM TVLGSSDPPS SGSFAAGYQT GLKGILQFLS DTGSPFAINP
201: YPFFAYQSDP RPETLAFCLF EPNAGRVDSK TGIKYTNMFD AQVDAVHSAL KSMGFEKVEI VVAETGWASR GDANEVGASV DNAKAYNGNL IAHLRSMVGT
301: PLMPGKPVDT YIFALYDENL KPGPSSERAF GLFKTDLSMV YDVGLAKSSS SSQTPSGKVT SSGWCVPKKG ATNEELQASL DWACGHGIDC GAIQPGGACF
401: EPNNVVSHAA YAMNMYFQKS PKQPTDCDFS KTATVTSQNP SYNNCVYPGG GGGGGGGGGG SKAVMNKYVS SDKVEKKNGA TEPKVSSSLS FLLIFLSLIF
501: HVYM
101: NVLPFYPASK IMLITVGNEI LMSNDPNLVN QLLPAMQNVQ KALEAVSLGG KIKVSTVNSM TVLGSSDPPS SGSFAAGYQT GLKGILQFLS DTGSPFAINP
201: YPFFAYQSDP RPETLAFCLF EPNAGRVDSK TGIKYTNMFD AQVDAVHSAL KSMGFEKVEI VVAETGWASR GDANEVGASV DNAKAYNGNL IAHLRSMVGT
301: PLMPGKPVDT YIFALYDENL KPGPSSERAF GLFKTDLSMV YDVGLAKSSS SSQTPSGKVT SSGWCVPKKG ATNEELQASL DWACGHGIDC GAIQPGGACF
401: EPNNVVSHAA YAMNMYFQKS PKQPTDCDFS KTATVTSQNP SYNNCVYPGG GGGGGGGGGG SKAVMNKYVS SDKVEKKNGA TEPKVSSSLS FLLIFLSLIF
501: HVYM
Arabidopsis Description
Glucan endo-1,3-beta-glucosidase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M069]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.